RNA–Protein interactions for RNA: ENST00000360565.7

SCAF1-201, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene SCAF1, Length 4,306 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-201ENST00000360565 RXRGP48443 463 aa16.19■□□□□ 0.18
SCAF1-201ENST00000360565 MTPNP58546 118 aa16.19■□□□□ 0.18
SCAF1-201ENST00000360565 PTPRCAPQ14761 206 aa16.19■□□□□ 0.18
SCAF1-201ENST00000360565 RAET1GQ6H3X3 334 aa16.19■□□□□ 0.18
SCAF1-201ENST00000360565 TXNDC5Q8NBS9 432 aaKnown RBP16.19■□□□□ 0.18
SCAF1-201ENST00000360565 CDK15Q96Q40 435 aa16.19■□□□□ 0.18
SCAF1-201ENST00000360565 FBRSL1Q9HCM7 1045 aaKnown RBP16.19■□□□□ 0.18
SCAF1-201ENST00000360565 KLHL20Q9Y2M5 609 aa16.19■□□□□ 0.18
SCAF1-201ENST00000360565 TBC1D3BA6NDS4 549 aa16.19■□□□□ 0.18
SCAF1-201ENST00000360565 SGTAO43765 313 aa16.19■□□□□ 0.18
SCAF1-201ENST00000360565 EPORP19235 508 aa16.19■□□□□ 0.18
SCAF1-201ENST00000360565 GPR1P46091 355 aa16.19■□□□□ 0.18
SCAF1-201ENST00000360565 RPS7P62081 194 aaKnown RBP16.19■□□□□ 0.18
SCAF1-201ENST00000360565 GPRIN1Q7Z2K8 1008 aa16.19■□□□□ 0.18
SCAF1-201ENST00000360565 TMEM135Q86UB9 458 aa16.19■□□□□ 0.18
SCAF1-201ENST00000360565 KBTBD7Q8WVZ9 684 aa16.19■□□□□ 0.18
SCAF1-201ENST00000360565 CCDC106Q9BWC9 280 aa16.19■□□□□ 0.18
SCAF1-201ENST00000360565 CHID1Q9BWS9 393 aa16.19■□□□□ 0.18
SCAF1-201ENST00000360565 KLHL28Q9NXS3 571 aa16.19■□□□□ 0.18
SCAF1-201ENST00000360565 ENOPH1Q9UHY7 261 aa16.19■□□□□ 0.18
SCAF1-201ENST00000360565 MTHFD1P11586 935 aaKnown RBP16.18■□□□□ 0.18
SCAF1-201ENST00000360565 SFT2D3Q587I9 215 aa16.18■□□□□ 0.18
SCAF1-201ENST00000360565 RD3Q7Z3Z2 195 aa16.18■□□□□ 0.18
SCAF1-201ENST00000360565 ASZ1Q8WWH4 475 aa16.18■□□□□ 0.18
SCAF1-201ENST00000360565 PKP2Q99959 881 aa16.18■□□□□ 0.18
SCAF1-201ENST00000360565 CIDEBQ9UHD4 219 aa16.18■□□□□ 0.18
SCAF1-201ENST00000360565 CLDN9O95484 217 aa16.18■□□□□ 0.18
SCAF1-201ENST00000360565 PABPC1P11940 636 aaKnown RBP16.18■□□□□ 0.18
SCAF1-201ENST00000360565 ALOX12P18054 663 aa16.18■□□□□ 0.18
SCAF1-201ENST00000360565 FAM174BQ3ZCQ3 159 aa16.18■□□□□ 0.18
SCAF1-201ENST00000360565 GALNT5Q7Z7M9 940 aa16.18■□□□□ 0.18
SCAF1-201ENST00000360565 SUSD6Q92537 303 aa16.18■□□□□ 0.18
SCAF1-201ENST00000360565 MTERF3Q96E29 417 aa16.18■□□□□ 0.18
SCAF1-201ENST00000360565 DEFB118Q96PH6 123 aa16.18■□□□□ 0.18
SCAF1-201ENST00000360565 MUC13Q9H3R2 512 aa16.18■□□□□ 0.18
SCAF1-201ENST00000360565 PALMDQ9NP74 551 aa16.18■□□□□ 0.18
SCAF1-201ENST00000360565 IKZF3Q9UKT9 509 aa16.18■□□□□ 0.18
SCAF1-201ENST00000360565 DOLKQ9UPQ8 538 aa16.18■□□□□ 0.18
SCAF1-201ENST00000360565 CPQQ9Y646 472 aa16.18■□□□□ 0.18
SCAF1-201ENST00000360565 NBNO60934 754 aa16.18■□□□□ 0.18
SCAF1-201ENST00000360565 THRBP10828 461 aa16.18■□□□□ 0.18
SCAF1-201ENST00000360565 GALK1P51570 392 aa16.18■□□□□ 0.18
SCAF1-201ENST00000360565 ZNF33AQ06730 810 aa16.18■□□□□ 0.18
SCAF1-201ENST00000360565 KHDRBS1Q07666 443 aaKnown RBP eCLIP16.18■□□□□ 0.18
SCAF1-201ENST00000360565 CRHR2Q13324 411 aa16.18■□□□□ 0.18
SCAF1-201ENST00000360565 CNPY1Q3B7I2 92 aa16.18■□□□□ 0.18
SCAF1-201ENST00000360565 SPANXN2Q5MJ10 180 aa16.18■□□□□ 0.18
SCAF1-201ENST00000360565 MTSS1LQ765P7 747 aa16.18■□□□□ 0.18
SCAF1-201ENST00000360565 LEMD2Q8NC56 503 aa16.18■□□□□ 0.18
SCAF1-201ENST00000360565 TMEM174Q8WUU8 243 aa16.18■□□□□ 0.18
SCAF1-201ENST00000360565 TMEM40Q8WWA1 233 aa16.18■□□□□ 0.18
SCAF1-201ENST00000360565 ABHD8Q96I13 439 aa16.18■□□□□ 0.18
SCAF1-201ENST00000360565 NUSAP1Q9BXS6 441 aaKnown RBP16.18■□□□□ 0.18
SCAF1-201ENST00000360565 NLNQ9BYT8 704 aa16.18■□□□□ 0.18
SCAF1-201ENST00000360565 DNAJC11Q9NVH1 559 aa16.18■□□□□ 0.18
SCAF1-201ENST00000360565 MKS1Q9NXB0 559 aa16.18■□□□□ 0.18
SCAF1-201ENST00000360565 KLHL3Q9UH77 587 aa16.18■□□□□ 0.18
SCAF1-201ENST00000360565 MEIS3P2A8K0S8 358 aa16.18■□□□□ 0.18
SCAF1-201ENST00000360565 NEDD8-MDP1E9PL57 170 aa16.18■□□□□ 0.18
SCAF1-201ENST00000360565 ADH1AP07327 375 aa16.18■□□□□ 0.18
SCAF1-201ENST00000360565 UMPSP11172 480 aa16.18■□□□□ 0.18
SCAF1-201ENST00000360565 NAPRTQ6XQN6 538 aa16.18■□□□□ 0.18
SCAF1-201ENST00000360565 GALNT15Q8N3T1 639 aa16.18■□□□□ 0.18
SCAF1-201ENST00000360565 FIBCD1Q8N539 461 aa16.18■□□□□ 0.18
SCAF1-201ENST00000360565 SLC2A13Q96QE2 648 aa16.18■□□□□ 0.18
SCAF1-201ENST00000360565 TDRD1Q9BXT4 1180 aaKnown RBP16.18■□□□□ 0.18
SCAF1-201ENST00000360565 OXCT2Q9BYC2 517 aaPredicted RBP16.18■□□□□ 0.18
SCAF1-201ENST00000360565 GIMAP2Q9UG22 337 aa16.18■□□□□ 0.18
SCAF1-201ENST00000360565 PDLIM1O00151 329 aa16.17■□□□□ 0.18
SCAF1-201ENST00000360565 QSOX1O00391 747 aa16.17■□□□□ 0.18
SCAF1-201ENST00000360565 ECI2O75521 394 aa16.17■□□□□ 0.18
SCAF1-201ENST00000360565 T-ENOLP0DO92 83 aa16.17■□□□□ 0.18
SCAF1-201ENST00000360565 ETV4P43268 484 aa16.17■□□□□ 0.18
SCAF1-201ENST00000360565 AP1S1P61966 158 aa16.17■□□□□ 0.18
SCAF1-201ENST00000360565 MRPL28Q13084 256 aaKnown RBP16.17■□□□□ 0.18
SCAF1-201ENST00000360565 NR1D2Q14995 579 aa16.17■□□□□ 0.18
SCAF1-201ENST00000360565 CYS1Q717R9 158 aa16.17■□□□□ 0.18
SCAF1-201ENST00000360565 THAP5Q7Z6K1 395 aa16.17■□□□□ 0.18
SCAF1-201ENST00000360565 NACC2Q96BF6 587 aa16.17■□□□□ 0.18
SCAF1-201ENST00000360565 TMEM209Q96SK2 561 aa16.17■□□□□ 0.18
SCAF1-201ENST00000360565 CXorf21Q9HAI6 301 aa16.17■□□□□ 0.18
SCAF1-201ENST00000360565 N4BP2Q86UW6 1770 aaPredicted RBP16.17■□□□□ 0.18
SCAF1-201ENST00000360565 H3BNX3 289 aa16.17■□□□□ 0.18
SCAF1-201ENST00000360565 CDC7O00311 574 aa16.17■□□□□ 0.18
SCAF1-201ENST00000360565 IL1BP01584 269 aa16.17■□□□□ 0.18
SCAF1-201ENST00000360565 SGCGQ13326 291 aa16.17■□□□□ 0.18
SCAF1-201ENST00000360565 NAE1Q13564 534 aa16.17■□□□□ 0.18
SCAF1-201ENST00000360565 KRR1Q13601 381 aaKnown RBP16.17■□□□□ 0.18
SCAF1-201ENST00000360565 ARMC4Q5T2S8 1044 aa16.17■□□□□ 0.18
SCAF1-201ENST00000360565 CGB2Q6NT52 195 aa16.17■□□□□ 0.18
SCAF1-201ENST00000360565 ARMC6Q6NXE6 501 aa16.17■□□□□ 0.18
SCAF1-201ENST00000360565 OOSP2Q86WS3 158 aa16.17■□□□□ 0.18
SCAF1-201ENST00000360565 CILP2Q8IUL8 1156 aa16.17■□□□□ 0.18
SCAF1-201ENST00000360565 NPAS4Q8IUM7 802 aa16.17■□□□□ 0.18
SCAF1-201ENST00000360565 RTP4Q96DX8 246 aa16.17■□□□□ 0.18
SCAF1-201ENST00000360565 TSEN34Q9BSV6 310 aaKnown RBP16.17■□□□□ 0.18
SCAF1-201ENST00000360565 AARSD1Q9BTE6 412 aaKnown RBP16.17■□□□□ 0.18
SCAF1-201ENST00000360565 DPP7Q9UHL4 492 aa16.17■□□□□ 0.18
SCAF1-201ENST00000360565 MAPRE3Q9UPY8 281 aa16.17■□□□□ 0.18
SCAF1-201ENST00000360565 SQORQ9Y6N5 450 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms