RNA–Protein interactions for RNA: ENST00000360515.7

CDC42SE2-201, Transcript of CDC42 small effector 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE2, Length 3,591 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-201ENST00000360515 CD86P42081 329 aa5.85□□□□□ -1.47
CDC42SE2-201ENST00000360515 PMS1P54277 932 aaKnown RBP5.85□□□□□ -1.47
CDC42SE2-201ENST00000360515 CHERPQ8IWX8 916 aaKnown RBP5.85□□□□□ -1.47
CDC42SE2-201ENST00000360515 LGI4Q8N135 537 aa5.85□□□□□ -1.47
CDC42SE2-201ENST00000360515 GRHL3Q8TE85 626 aa5.85□□□□□ -1.47
CDC42SE2-201ENST00000360515 FNIP1Q8TF40 1166 aa5.85□□□□□ -1.47
CDC42SE2-201ENST00000360515 NOCTQ9UK39 431 aaKnown RBP5.85□□□□□ -1.47
CDC42SE2-201ENST00000360515 SNX10Q9Y5X0 201 aa5.85□□□□□ -1.47
CDC42SE2-201ENST00000360515 ARHGAP42A6NI28 874 aa5.84□□□□□ -1.47
CDC42SE2-201ENST00000360515 BHMG1C9JSJ3 638 aaPredicted RBP5.84□□□□□ -1.47
CDC42SE2-201ENST00000360515 AGPSO00116 658 aa5.84□□□□□ -1.47
CDC42SE2-201ENST00000360515 KMOO15229 486 aa5.84□□□□□ -1.47
CDC42SE2-201ENST00000360515 UMODP07911 640 aa5.84□□□□□ -1.47
CDC42SE2-201ENST00000360515 HOXD4P09016 255 aaPredicted RBP5.84□□□□□ -1.47
CDC42SE2-201ENST00000360515 UNGP13051 313 aaPredicted RBP5.84□□□□□ -1.47
CDC42SE2-201ENST00000360515 CYP11B1P15538 503 aa5.84□□□□□ -1.47
CDC42SE2-201ENST00000360515 PSMA3P25788 255 aa5.84□□□□□ -1.47
CDC42SE2-201ENST00000360515 MSX1P28360 303 aa5.84□□□□□ -1.47
CDC42SE2-201ENST00000360515 THBS2P35442 1172 aa5.84□□□□□ -1.47
CDC42SE2-201ENST00000360515 PBX1P40424 430 aa5.84□□□□□ -1.47
CDC42SE2-201ENST00000360515 ACTR1BP42025 376 aa5.84□□□□□ -1.47
CDC42SE2-201ENST00000360515 GFERP55789 205 aa5.84□□□□□ -1.47
CDC42SE2-201ENST00000360515 ACTR1AP61163 376 aa5.84□□□□□ -1.47
CDC42SE2-201ENST00000360515 TUBB3Q13509 450 aa5.84□□□□□ -1.47
CDC42SE2-201ENST00000360515 TLR1Q15399 786 aa5.84□□□□□ -1.47
CDC42SE2-201ENST00000360515 KRTCAP3Q53RY4 240 aa5.84□□□□□ -1.47
CDC42SE2-201ENST00000360515 TFAP2DQ7Z6R9 452 aa5.84□□□□□ -1.47
CDC42SE2-201ENST00000360515 KRTAP1-3Q8IUG1 177 aa5.84□□□□□ -1.47
CDC42SE2-201ENST00000360515 SIAH3Q8IW03 269 aa5.84□□□□□ -1.47
CDC42SE2-201ENST00000360515 TRAM1L1Q8N609 369 aa5.84□□□□□ -1.47
CDC42SE2-201ENST00000360515 ENDOVQ8N8Q3 282 aaKnown RBP5.84□□□□□ -1.47
CDC42SE2-201ENST00000360515 MSANTD4Q8NCY6 345 aa5.84□□□□□ -1.47
CDC42SE2-201ENST00000360515 GPT2Q8TD30 523 aa5.84□□□□□ -1.47
CDC42SE2-201ENST00000360515 PDCD6IPQ8WUM4 868 aaKnown RBP5.84□□□□□ -1.47
CDC42SE2-201ENST00000360515 NTNG2Q96CW9 530 aa5.84□□□□□ -1.47
CDC42SE2-201ENST00000360515 SCMH1Q96GD3 660 aa5.84□□□□□ -1.47
CDC42SE2-201ENST00000360515 GBP5Q96PP8 586 aa5.84□□□□□ -1.47
CDC42SE2-201ENST00000360515 NUP85Q9BW27 656 aa5.84□□□□□ -1.47
CDC42SE2-201ENST00000360515 TRIM39Q9HCM9 518 aa5.84□□□□□ -1.47
CDC42SE2-201ENST00000360515 C1GALT1Q9NS00 363 aa5.84□□□□□ -1.47
CDC42SE2-201ENST00000360515 AP1M2Q9Y6Q5 423 aa5.84□□□□□ -1.47
CDC42SE2-201ENST00000360515 CELSR1Q9NYQ6 3014 aa5.84□□□□□ -1.47
CDC42SE2-201ENST00000360515 MEN1O00255 615 aa5.84□□□□□ -1.47
CDC42SE2-201ENST00000360515 KRT86O43790 486 aa5.84□□□□□ -1.47
CDC42SE2-201ENST00000360515 KIR3DL1P43629 444 aa5.84□□□□□ -1.47
CDC42SE2-201ENST00000360515 SLC38A9Q8NBW4 561 aa5.84□□□□□ -1.47
CDC42SE2-201ENST00000360515 TSGA13Q96PP4 275 aa5.84□□□□□ -1.47
CDC42SE2-201ENST00000360515 RUFY1Q96T51 708 aa5.84□□□□□ -1.47
CDC42SE2-201ENST00000360515 TFB2MQ9H5Q4 396 aaKnown RBP5.84□□□□□ -1.47
CDC42SE2-201ENST00000360515 IL1RAPL1Q9NZN1 696 aa5.84□□□□□ -1.47
CDC42SE2-201ENST00000360515 MEMO1Q9Y316 297 aa5.84□□□□□ -1.47
CDC42SE2-201ENST00000360515 LOC102723996A0A087X1L8 192 aa5.83□□□□□ -1.48
CDC42SE2-201ENST00000360515 IGHV5-51A0A0C4DH38 117 aa5.83□□□□□ -1.48
CDC42SE2-201ENST00000360515 NPIPB15A6NHN6 443 aaPredicted RBP5.83□□□□□ -1.48
CDC42SE2-201ENST00000360515 SIGLEC16A6NMB1 481 aa5.83□□□□□ -1.48
CDC42SE2-201ENST00000360515 ZNF487B1APH4 448 aa5.83□□□□□ -1.48
CDC42SE2-201ENST00000360515 PPP1R3GB7ZBB8 358 aa5.83□□□□□ -1.48
CDC42SE2-201ENST00000360515 ZG16O60844 167 aa5.83□□□□□ -1.48
CDC42SE2-201ENST00000360515 TMCC2O75069 709 aa5.83□□□□□ -1.48
CDC42SE2-201ENST00000360515 HPP00738 406 aa5.83□□□□□ -1.48
CDC42SE2-201ENST00000360515 CASP14P31944 242 aa5.83□□□□□ -1.48
CDC42SE2-201ENST00000360515 ANP32AP39687 249 aaKnown RBP5.83□□□□□ -1.48
CDC42SE2-201ENST00000360515 ZNF143P52747 638 aaPredicted RBP5.83□□□□□ -1.48
CDC42SE2-201ENST00000360515 SH3BP2P78314 561 aa5.83□□□□□ -1.48
CDC42SE2-201ENST00000360515 FOLH1Q04609 750 aa5.83□□□□□ -1.48
CDC42SE2-201ENST00000360515 NME3Q13232 169 aa5.83□□□□□ -1.48
CDC42SE2-201ENST00000360515 ANO6Q4KMQ2 910 aa5.83□□□□□ -1.48
CDC42SE2-201ENST00000360515 LCN10Q6JVE6 187 aa5.83□□□□□ -1.48
CDC42SE2-201ENST00000360515 USP45Q70EL2 814 aa5.83□□□□□ -1.48
CDC42SE2-201ENST00000360515 PCGF5Q86SE9 256 aa5.83□□□□□ -1.48
CDC42SE2-201ENST00000360515 ADGRG6Q86SQ4 1221 aa5.83□□□□□ -1.48
CDC42SE2-201ENST00000360515 GRAMD1CQ8IYS0 662 aa5.83□□□□□ -1.48
CDC42SE2-201ENST00000360515 LRRC75A-AS1Q8N1F1 130 aa5.83□□□□□ -1.48
CDC42SE2-201ENST00000360515 CISD2Q8N5K1 135 aaKnown RBP5.83□□□□□ -1.48
CDC42SE2-201ENST00000360515 SIDT2Q8NBJ9 832 aaKnown RBP5.83□□□□□ -1.48
CDC42SE2-201ENST00000360515 DENND1AQ8TEH3 1009 aa5.83□□□□□ -1.48
CDC42SE2-201ENST00000360515 PIP5K1AQ99755 562 aa5.83□□□□□ -1.48
CDC42SE2-201ENST00000360515 SCHIP1Q9P0W5 487 aaPredicted RBP5.83□□□□□ -1.48
CDC42SE2-201ENST00000360515 SPTAN1Q13813 2472 aaKnown RBP5.83□□□□□ -1.48
CDC42SE2-201ENST00000360515 F13A1P00488 732 aa5.83□□□□□ -1.48
CDC42SE2-201ENST00000360515 CRYABP02511 175 aaKnown RBP5.83□□□□□ -1.48
CDC42SE2-201ENST00000360515 DNAJA1P31689 397 aaKnown RBP5.83□□□□□ -1.48
CDC42SE2-201ENST00000360515 CCL11P51671 97 aa5.83□□□□□ -1.48
CDC42SE2-201ENST00000360515 SMSP52788 366 aa5.83□□□□□ -1.48
CDC42SE2-201ENST00000360515 PTK2Q05397 1052 aa5.83□□□□□ -1.48
CDC42SE2-201ENST00000360515 ATP1A4Q13733 1029 aa5.83□□□□□ -1.48
CDC42SE2-201ENST00000360515 CAMK1DQ8IU85 385 aa5.83□□□□□ -1.48
CDC42SE2-201ENST00000360515 DMRTC2Q8IXT2 367 aaPredicted RBP5.83□□□□□ -1.48
CDC42SE2-201ENST00000360515 PPM1KQ8N3J5 372 aa5.83□□□□□ -1.48
CDC42SE2-201ENST00000360515 PGBD5Q8N414 524 aa5.83□□□□□ -1.48
CDC42SE2-201ENST00000360515 FLVCR1-AS1Q8TAF5 88 aa5.83□□□□□ -1.48
CDC42SE2-201ENST00000360515 PANK2Q9BZ23 570 aa5.83□□□□□ -1.48
CDC42SE2-201ENST00000360515 ILKAPQ9H0C8 392 aaPredicted RBP5.83□□□□□ -1.48
CDC42SE2-201ENST00000360515 PLCB1Q9NQ66 1216 aa5.83□□□□□ -1.48
CDC42SE2-201ENST00000360515 PLSCR2Q9NRY7 297 aa5.83□□□□□ -1.48
CDC42SE2-201ENST00000360515 FAM207AQ9NSI2 230 aaPredicted RBP5.83□□□□□ -1.48
CDC42SE2-201ENST00000360515 NXT1Q9UKK6 140 aaKnown RBP5.83□□□□□ -1.48
CDC42SE2-201ENST00000360515 TRIM49BA6NDI0 452 aa5.83□□□□□ -1.48
CDC42SE2-201ENST00000360515 AGAP14A8MT82 685 aa5.83□□□□□ -1.48
CDC42SE2-201ENST00000360515 ADAM10O14672 748 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms