RNA–Protein interactions for RNA: ENST00000359052.8

SMARCAD1-202, Transcript of SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1, humanhuman

APPRIS ALT1 TSL 1 (best)

Gene SMARCAD1, Length 5,017 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAD1-202ENST00000359052 CASC3O15234 703 aaKnown RBP1.85□□□□□ -2.11
SMARCAD1-202ENST00000359052 KCNJ13O60928 360 aa1.85□□□□□ -2.11
SMARCAD1-202ENST00000359052 CAVIN2O95810 425 aa1.85□□□□□ -2.11
SMARCAD1-202ENST00000359052 MAGEA4P43358 317 aa1.85□□□□□ -2.11
SMARCAD1-202ENST00000359052 PITPNBP48739 271 aa1.85□□□□□ -2.11
SMARCAD1-202ENST00000359052 PLIN5Q00G26 463 aa1.85□□□□□ -2.11
SMARCAD1-202ENST00000359052 DSC1Q08554 894 aa1.85□□□□□ -2.11
SMARCAD1-202ENST00000359052 ARHGEF7Q14155 803 aa1.85□□□□□ -2.11
SMARCAD1-202ENST00000359052 MTHFSDQ2M296 383 aaKnown RBP1.85□□□□□ -2.11
SMARCAD1-202ENST00000359052 ADGRF1Q5T601 910 aa1.85□□□□□ -2.11
SMARCAD1-202ENST00000359052 LIN9Q5TKA1 542 aa1.85□□□□□ -2.11
SMARCAD1-202ENST00000359052 APOBEC3HQ6NTF7 200 aaKnown RBP1.85□□□□□ -2.11
SMARCAD1-202ENST00000359052 SLC30A10Q6XR72 485 aa1.85□□□□□ -2.11
SMARCAD1-202ENST00000359052 ZC3H3Q8IXZ2 948 aaKnown RBP1.85□□□□□ -2.11
SMARCAD1-202ENST00000359052 GPR135Q8IZ08 494 aa1.85□□□□□ -2.11
SMARCAD1-202ENST00000359052 MSANTD4Q8NCY6 345 aa1.85□□□□□ -2.11
SMARCAD1-202ENST00000359052 DTX3LQ8TDB6 740 aa1.85□□□□□ -2.11
SMARCAD1-202ENST00000359052 C2CD4CQ8TF44 421 aa1.85□□□□□ -2.11
SMARCAD1-202ENST00000359052 RAD54LQ92698 747 aa1.85□□□□□ -2.11
SMARCAD1-202ENST00000359052 DNASE1L2Q92874 299 aa1.85□□□□□ -2.11
SMARCAD1-202ENST00000359052 IQCDQ96DY2 449 aa1.85□□□□□ -2.11
SMARCAD1-202ENST00000359052 GPR61Q9BZJ8 451 aa1.85□□□□□ -2.11
SMARCAD1-202ENST00000359052 CXorf36Q9H7Y0 433 aa1.85□□□□□ -2.11
SMARCAD1-202ENST00000359052 Q9N2K0 584 aa1.85□□□□□ -2.11
SMARCAD1-202ENST00000359052 ATAD3AQ9NVI7 634 aa1.85□□□□□ -2.11
SMARCAD1-202ENST00000359052 SPATA6Q9NWH7 488 aaPredicted RBP1.85□□□□□ -2.11
SMARCAD1-202ENST00000359052 FZD10Q9ULW2 581 aa1.85□□□□□ -2.11
SMARCAD1-202ENST00000359052 NENFQ9UMX5 172 aa1.85□□□□□ -2.11
SMARCAD1-202ENST00000359052 B9D1Q9UPM9 204 aa1.85□□□□□ -2.11
SMARCAD1-202ENST00000359052 ACOT9Q9Y305 439 aa1.85□□□□□ -2.11
SMARCAD1-202ENST00000359052 FRYLO94915 3013 aa1.85□□□□□ -2.11
SMARCAD1-202ENST00000359052 VWA8A3KMH1 1905 aa1.85□□□□□ -2.11
SMARCAD1-202ENST00000359052 SDR42E2A6NKP2 422 aa1.84□□□□□ -2.11
SMARCAD1-202ENST00000359052 MCIDASD6RGH6 385 aa1.84□□□□□ -2.11
SMARCAD1-202ENST00000359052 WNT9BO14905 357 aa1.84□□□□□ -2.11
SMARCAD1-202ENST00000359052 CASQ2O14958 399 aaPredicted RBP1.84□□□□□ -2.11
SMARCAD1-202ENST00000359052 LRP3O75074 770 aa1.84□□□□□ -2.11
SMARCAD1-202ENST00000359052 CLN5O75503 358 aa1.84□□□□□ -2.11
SMARCAD1-202ENST00000359052 PAPSS2O95340 614 aaPredicted RBP1.84□□□□□ -2.11
SMARCAD1-202ENST00000359052 DDCP20711 480 aa1.84□□□□□ -2.11
SMARCAD1-202ENST00000359052 CA8P35219 290 aa1.84□□□□□ -2.11
SMARCAD1-202ENST00000359052 GBX2P52951 348 aaPredicted RBP1.84□□□□□ -2.11
SMARCAD1-202ENST00000359052 NPEPPSP55786 919 aa1.84□□□□□ -2.11
SMARCAD1-202ENST00000359052 HNRNPH2P55795 449 aaKnown RBP1.84□□□□□ -2.11
SMARCAD1-202ENST00000359052 B4GALNT1Q00973 533 aa1.84□□□□□ -2.11
SMARCAD1-202ENST00000359052 MRPL49Q13405 166 aaKnown RBP1.84□□□□□ -2.11
SMARCAD1-202ENST00000359052 PDK1Q15118 436 aa1.84□□□□□ -2.11
SMARCAD1-202ENST00000359052 PCK2Q16822 640 aa1.84□□□□□ -2.11
SMARCAD1-202ENST00000359052 LINC01620Q4KN68 170 aa1.84□□□□□ -2.11
SMARCAD1-202ENST00000359052 SGO2Q562F6 1265 aa1.84□□□□□ -2.11
SMARCAD1-202ENST00000359052 KHDC1LQ5JSQ8 128 aa1.84□□□□□ -2.11
SMARCAD1-202ENST00000359052 CCDC183Q5T5S1 534 aa1.84□□□□□ -2.11
SMARCAD1-202ENST00000359052 IL23RQ5VWK5 629 aa1.84□□□□□ -2.11
SMARCAD1-202ENST00000359052 ALKAL1Q6UXT8 129 aa1.84□□□□□ -2.11
SMARCAD1-202ENST00000359052 LARP4Q71RC2 724 aaKnown RBP eCLIP1.84□□□□□ -2.11
SMARCAD1-202ENST00000359052 CPNE8Q86YQ8 564 aa1.84□□□□□ -2.11
SMARCAD1-202ENST00000359052 BANPQ8N9N5 519 aa1.84□□□□□ -2.11
SMARCAD1-202ENST00000359052 SLC44A5Q8NCS7 719 aa1.84□□□□□ -2.11
SMARCAD1-202ENST00000359052 MCPH1Q8NEM0 835 aa1.84□□□□□ -2.11
SMARCAD1-202ENST00000359052 FLAD1Q8NFF5 587 aa1.84□□□□□ -2.11
SMARCAD1-202ENST00000359052 B4GALNT2Q8NHY0 566 aa1.84□□□□□ -2.11
SMARCAD1-202ENST00000359052 RFWD2Q8NHY2 731 aa1.84□□□□□ -2.11
SMARCAD1-202ENST00000359052 P2RX5Q93086 422 aa1.84□□□□□ -2.11
SMARCAD1-202ENST00000359052 INTS12Q96CB8 462 aaKnown RBP1.84□□□□□ -2.11
SMARCAD1-202ENST00000359052 TMA16Q96EY4 203 aaKnown RBP1.84□□□□□ -2.11
SMARCAD1-202ENST00000359052 FAM71F1Q96KD3 344 aaPredicted RBP1.84□□□□□ -2.11
SMARCAD1-202ENST00000359052 SLC25A18Q9H1K4 315 aa1.84□□□□□ -2.11
SMARCAD1-202ENST00000359052 UBQLN3Q9H347 655 aa1.84□□□□□ -2.11
SMARCAD1-202ENST00000359052 MPP6Q9NZW5 540 aa1.84□□□□□ -2.11
SMARCAD1-202ENST00000359052 PEF1Q9UBV8 284 aaKnown RBP1.84□□□□□ -2.11
SMARCAD1-202ENST00000359052 KCNK7Q9Y2U2 307 aa1.84□□□□□ -2.11
SMARCAD1-202ENST00000359052 PCDHGB1Q9Y5G3 927 aa1.84□□□□□ -2.11
SMARCAD1-202ENST00000359052 CSMD3Q7Z407 3707 aa1.84□□□□□ -2.11
SMARCAD1-202ENST00000359052 RFX7Q2KHR2 1363 aa1.84□□□□□ -2.11
SMARCAD1-202ENST00000359052 E7ENX8 843 aa1.84□□□□□ -2.11
SMARCAD1-202ENST00000359052 EBAG9O00559 213 aa1.84□□□□□ -2.11
SMARCAD1-202ENST00000359052 GSTA4O15217 222 aa1.84□□□□□ -2.11
SMARCAD1-202ENST00000359052 TXNL1O43396 289 aa1.84□□□□□ -2.11
SMARCAD1-202ENST00000359052 UPK3AO75631 287 aa1.84□□□□□ -2.11
SMARCAD1-202ENST00000359052 TOP3BO95985 862 aaKnown RBP1.84□□□□□ -2.11
SMARCAD1-202ENST00000359052 PROS1P07225 676 aa1.84□□□□□ -2.11
SMARCAD1-202ENST00000359052 FAM86B2P0C5J1 330 aa1.84□□□□□ -2.11
SMARCAD1-202ENST00000359052 SRCP12931 536 aa1.84□□□□□ -2.11
SMARCAD1-202ENST00000359052 CBR1P16152 277 aa1.84□□□□□ -2.11
SMARCAD1-202ENST00000359052 ZNF28P17035 718 aa1.84□□□□□ -2.11
SMARCAD1-202ENST00000359052 ETV3P41162 512 aa1.84□□□□□ -2.11
SMARCAD1-202ENST00000359052 PTPN9P43378 593 aa1.84□□□□□ -2.11
SMARCAD1-202ENST00000359052 GNAQP50148 359 aa1.84□□□□□ -2.11
SMARCAD1-202ENST00000359052 RPS14P62263 151 aaKnown RBP1.84□□□□□ -2.11
SMARCAD1-202ENST00000359052 CCZ1BP86790 482 aa1.84□□□□□ -2.11
SMARCAD1-202ENST00000359052 CCZ1P86791 482 aaPredicted RBP1.84□□□□□ -2.11
SMARCAD1-202ENST00000359052 SLC18A3Q16572 532 aa1.84□□□□□ -2.11
SMARCAD1-202ENST00000359052 SIRT6Q8N6T7 355 aa1.84□□□□□ -2.11
SMARCAD1-202ENST00000359052 ZNF366Q8N895 744 aa1.84□□□□□ -2.11
SMARCAD1-202ENST00000359052 TP53I13Q8NBR0 393 aaPredicted RBP1.84□□□□□ -2.11
SMARCAD1-202ENST00000359052 NANPQ8TBE9 248 aa1.84□□□□□ -2.11
SMARCAD1-202ENST00000359052 PRICKLE1Q96MT3 831 aaPredicted RBP1.84□□□□□ -2.11
SMARCAD1-202ENST00000359052 PNMA5Q96PV4 448 aa1.84□□□□□ -2.11
SMARCAD1-202ENST00000359052 FAM111AQ96PZ2 611 aa1.84□□□□□ -2.11
SMARCAD1-202ENST00000359052 ADAM2Q99965 735 aa1.84□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms