RNA–Protein interactions for RNA: ENST00000358528.8

CSDE1-203, Transcript of cold shock domain containing E1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSDE1, Length 4,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-203ENST00000358528 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP6.52□□□□□ -1.37
CSDE1-203ENST00000358528 EIF3LQ9Y262 564 aaKnown RBP6.52□□□□□ -1.37
CSDE1-203ENST00000358528 PCDHGC4Q9Y5F7 938 aa6.52□□□□□ -1.37
CSDE1-203ENST00000358528 HS3ST4Q9Y661 456 aa6.52□□□□□ -1.37
CSDE1-203ENST00000358528 PTCH2Q9Y6C5 1203 aa6.52□□□□□ -1.37
CSDE1-203ENST00000358528 PHIPQ8WWQ0 1821 aa6.52□□□□□ -1.37
CSDE1-203ENST00000358528 PTGESO14684 152 aa6.51□□□□□ -1.37
CSDE1-203ENST00000358528 SEC24AO95486 1093 aa6.51□□□□□ -1.37
CSDE1-203ENST00000358528 S1PR4O95977 384 aa6.51□□□□□ -1.37
CSDE1-203ENST00000358528 VARSP26640 1264 aaKnown RBP6.51□□□□□ -1.37
CSDE1-203ENST00000358528 AXLP30530 894 aa6.51□□□□□ -1.37
CSDE1-203ENST00000358528 RFC2P35250 354 aa6.51□□□□□ -1.37
CSDE1-203ENST00000358528 HCAR3P49019 387 aa6.51□□□□□ -1.37
CSDE1-203ENST00000358528 GPR15P49685 360 aa6.51□□□□□ -1.37
CSDE1-203ENST00000358528 BCAP31P51572 246 aa6.51□□□□□ -1.37
CSDE1-203ENST00000358528 HMGCS1Q01581 520 aa6.51□□□□□ -1.37
CSDE1-203ENST00000358528 RELAQ04206 551 aa6.51□□□□□ -1.37
CSDE1-203ENST00000358528 DAG1Q14118 895 aa6.51□□□□□ -1.37
CSDE1-203ENST00000358528 TRIP4Q15650 581 aaPredicted RBP6.51□□□□□ -1.37
CSDE1-203ENST00000358528 ZBTB6Q15916 424 aa6.51□□□□□ -1.37
CSDE1-203ENST00000358528 INAQ16352 499 aa6.51□□□□□ -1.37
CSDE1-203ENST00000358528 BORAQ6PGQ7 559 aa6.51□□□□□ -1.37
CSDE1-203ENST00000358528 LYSMD3Q7Z3D4 306 aa6.51□□□□□ -1.37
CSDE1-203ENST00000358528 ITIH5Q86UX2 942 aa6.51□□□□□ -1.37
CSDE1-203ENST00000358528 IFNLR1Q8IU57 520 aaPredicted RBP6.51□□□□□ -1.37
CSDE1-203ENST00000358528 P3H2Q8IVL5 708 aa6.51□□□□□ -1.37
CSDE1-203ENST00000358528 PELI3Q8N2H9 469 aa6.51□□□□□ -1.37
CSDE1-203ENST00000358528 TMEM151AQ8N4L1 468 aa6.51□□□□□ -1.37
CSDE1-203ENST00000358528 OR7D4Q8NG98 312 aa6.51□□□□□ -1.37
CSDE1-203ENST00000358528 PNPT1Q8TCS8 783 aaKnown RBP6.51□□□□□ -1.37
CSDE1-203ENST00000358528 CAPSLQ8WWF8 208 aa6.51□□□□□ -1.37
CSDE1-203ENST00000358528 SLC47A1Q96FL8 570 aa6.51□□□□□ -1.37
CSDE1-203ENST00000358528 FEM1CQ96JP0 617 aa6.51□□□□□ -1.37
CSDE1-203ENST00000358528 CEP19Q96LK0 163 aa6.51□□□□□ -1.37
CSDE1-203ENST00000358528 BIRC8Q96P09 236 aa6.51□□□□□ -1.37
CSDE1-203ENST00000358528 ASB2Q96Q27 587 aa6.51□□□□□ -1.37
CSDE1-203ENST00000358528 CAMKK2Q96RR4 588 aa6.51□□□□□ -1.37
CSDE1-203ENST00000358528 HERC2P3Q9BVR0 1158 aa6.51□□□□□ -1.37
CSDE1-203ENST00000358528 UGT2B28Q9BY64 529 aa6.51□□□□□ -1.37
CSDE1-203ENST00000358528 ADAMTS10Q9H324 1103 aa6.51□□□□□ -1.37
CSDE1-203ENST00000358528 ACTR8Q9H981 624 aa6.51□□□□□ -1.37
CSDE1-203ENST00000358528 EXOSC4Q9NPD3 245 aaKnown RBP6.51□□□□□ -1.37
CSDE1-203ENST00000358528 COL4A5P29400 1685 aa6.51□□□□□ -1.37
CSDE1-203ENST00000358528 TTC3P53804 2025 aa6.51□□□□□ -1.37
CSDE1-203ENST00000358528 A0A1W2PP18 115 aa6.51□□□□□ -1.37
CSDE1-203ENST00000358528 ARL5CA6NH57 179 aa6.51□□□□□ -1.37
CSDE1-203ENST00000358528 H0Y858 1186 aa6.51□□□□□ -1.37
CSDE1-203ENST00000358528 RASAL1O95294 804 aa6.51□□□□□ -1.37
CSDE1-203ENST00000358528 CPSF4O95639 269 aaKnown RBP6.51□□□□□ -1.37
CSDE1-203ENST00000358528 G6PDP11413 515 aa6.51□□□□□ -1.37
CSDE1-203ENST00000358528 CTPS1P17812 591 aa6.51□□□□□ -1.37
CSDE1-203ENST00000358528 HSPA7P48741 367 aa6.51□□□□□ -1.37
CSDE1-203ENST00000358528 ARSFP54793 590 aa6.51□□□□□ -1.37
CSDE1-203ENST00000358528 EMP3P54852 163 aa6.51□□□□□ -1.37
CSDE1-203ENST00000358528 YBX1P67809 324 aaKnown RBP6.51□□□□□ -1.37
CSDE1-203ENST00000358528 FPGSQ05932 587 aa6.51□□□□□ -1.37
CSDE1-203ENST00000358528 CPSF6Q16630 551 aaKnown RBP eCLIP6.51□□□□□ -1.373e-7■□□□□ 8.6
CSDE1-203ENST00000358528 TMEM236Q5W0B7 351 aa6.51□□□□□ -1.37
CSDE1-203ENST00000358528 DENND5AQ6IQ26 1287 aa6.51□□□□□ -1.37
CSDE1-203ENST00000358528 RANBP10Q6VN20 620 aa6.51□□□□□ -1.37
CSDE1-203ENST00000358528 GPR142Q7Z601 462 aa6.51□□□□□ -1.37
CSDE1-203ENST00000358528 PLEKHH3Q7Z736 793 aa6.51□□□□□ -1.37
CSDE1-203ENST00000358528 PHACTR4Q8IZ21 702 aa6.51□□□□□ -1.37
CSDE1-203ENST00000358528 ATAD1Q8NBU5 361 aa6.51□□□□□ -1.37
CSDE1-203ENST00000358528 ZNF540Q8NDQ6 660 aa6.51□□□□□ -1.37
CSDE1-203ENST00000358528 C3orf58Q8NDZ4 430 aa6.51□□□□□ -1.37
CSDE1-203ENST00000358528 OR6K2Q8NGY2 324 aa6.51□□□□□ -1.37
CSDE1-203ENST00000358528 HMGCLL1Q8TB92 370 aa6.51□□□□□ -1.37
CSDE1-203ENST00000358528 ISL2Q96A47 359 aa6.51□□□□□ -1.37
CSDE1-203ENST00000358528 AURKBQ96GD4 344 aaPredicted RBP6.51□□□□□ -1.37
CSDE1-203ENST00000358528 TPD52L3Q96J77 140 aa6.51□□□□□ -1.37
CSDE1-203ENST00000358528 MAGED4Q96JG8 741 aa6.51□□□□□ -1.37
CSDE1-203ENST00000358528 TEX37Q96LM6 180 aa6.51□□□□□ -1.37
CSDE1-203ENST00000358528 MYRFLQ96LU7 910 aa6.51□□□□□ -1.37
CSDE1-203ENST00000358528 NODALQ96S42 347 aa6.51□□□□□ -1.37
CSDE1-203ENST00000358528 SLC30A3Q99726 388 aa6.51□□□□□ -1.37
CSDE1-203ENST00000358528 LHPPQ9H008 270 aa6.51□□□□□ -1.37
CSDE1-203ENST00000358528 ITM2CQ9NQX7 267 aa6.51□□□□□ -1.37
CSDE1-203ENST00000358528 TMLHEQ9NVH6 421 aa6.51□□□□□ -1.37
CSDE1-203ENST00000358528 MARCH2Q9P0N8 246 aa6.51□□□□□ -1.37
CSDE1-203ENST00000358528 PPP2R3BQ9Y5P8 575 aa6.51□□□□□ -1.37
CSDE1-203ENST00000358528 COL1A2P08123 1366 aa6.51□□□□□ -1.37
CSDE1-203ENST00000358528 SMIM35A0A1B0GVV1 85 aa6.51□□□□□ -1.37
CSDE1-203ENST00000358528 CLDN25C9JDP6 229 aa6.51□□□□□ -1.37
CSDE1-203ENST00000358528 F8W810 466 aa6.51□□□□□ -1.37
CSDE1-203ENST00000358528 SLC7A4O43246 635 aa6.51□□□□□ -1.37
CSDE1-203ENST00000358528 GPR32O75388 356 aa6.51□□□□□ -1.37
CSDE1-203ENST00000358528 PRKD3O94806 890 aa6.51□□□□□ -1.37
CSDE1-203ENST00000358528 SNAI1O95863 264 aaPredicted RBP6.51□□□□□ -1.37
CSDE1-203ENST00000358528 CD1DP15813 335 aa6.51□□□□□ -1.37
CSDE1-203ENST00000358528 ZNF12P17014 697 aa6.51□□□□□ -1.37
CSDE1-203ENST00000358528 ALOX12P18054 663 aa6.51□□□□□ -1.37
CSDE1-203ENST00000358528 AGXTP21549 392 aa6.51□□□□□ -1.37
CSDE1-203ENST00000358528 CD52P31358 61 aa6.51□□□□□ -1.37
CSDE1-203ENST00000358528 GDF5P43026 501 aa6.51□□□□□ -1.37
CSDE1-203ENST00000358528 POLD2P49005 469 aa6.51□□□□□ -1.37
CSDE1-203ENST00000358528 TPTEP56180 551 aa6.51□□□□□ -1.37
CSDE1-203ENST00000358528 SEMG2Q02383 582 aa6.51□□□□□ -1.37
CSDE1-203ENST00000358528 DMPKQ09013 629 aa6.51□□□□□ -1.37
CSDE1-203ENST00000358528 MADCAM1Q13477 382 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms