RNA–Protein interactions for RNA: ENST00000357654.7

BRCA1-203, Transcript of BRCA1, DNA repair associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRCA1, Length 7,094 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-203ENST00000357654 CD40LGP29965 261 aa5.76□□□□□ -1.49
BRCA1-203ENST00000357654 YAP1P46937 504 aaKnown RBP5.76□□□□□ -1.49
BRCA1-203ENST00000357654 NEK3P51956 506 aa5.76□□□□□ -1.49
BRCA1-203ENST00000357654 RAB4BP61018 213 aa5.76□□□□□ -1.49
BRCA1-203ENST00000357654 OLR1P78380 273 aa5.76□□□□□ -1.49
BRCA1-203ENST00000357654 N4BP2L1Q5TBK1 243 aaPredicted RBP5.76□□□□□ -1.49
BRCA1-203ENST00000357654 KCNT2Q6UVM3 1135 aa5.76□□□□□ -1.49
BRCA1-203ENST00000357654 GALNT5Q7Z7M9 940 aa5.76□□□□□ -1.49
BRCA1-203ENST00000357654 CAND1Q86VP6 1230 aaKnown RBP5.76□□□□□ -1.49
BRCA1-203ENST00000357654 IQCHQ86VS3 1027 aa5.76□□□□□ -1.49
BRCA1-203ENST00000357654 CCDC116Q8IYX3 515 aa5.76□□□□□ -1.49
BRCA1-203ENST00000357654 ALDH16A1Q8IZ83 802 aa5.76□□□□□ -1.49
BRCA1-203ENST00000357654 RIBC1Q8N443 379 aaPredicted RBP5.76□□□□□ -1.49
BRCA1-203ENST00000357654 ZNF548Q8NEK5 533 aaPredicted RBP5.76□□□□□ -1.49
BRCA1-203ENST00000357654 NDNFQ8TB73 568 aa5.76□□□□□ -1.49
BRCA1-203ENST00000357654 GPT2Q8TD30 523 aa5.76□□□□□ -1.49
BRCA1-203ENST00000357654 LIPHQ8WWY8 451 aa5.76□□□□□ -1.49
BRCA1-203ENST00000357654 DNAJC9Q8WXX5 260 aa5.76□□□□□ -1.49
BRCA1-203ENST00000357654 GCDHQ92947 438 aaPredicted RBP5.76□□□□□ -1.49
BRCA1-203ENST00000357654 C16orf58Q96GQ5 468 aa5.76□□□□□ -1.49
BRCA1-203ENST00000357654 OR1F2PQ96R84 312 aa5.76□□□□□ -1.49
BRCA1-203ENST00000357654 CRAMP1Q96RY5 1269 aa5.76□□□□□ -1.49
BRCA1-203ENST00000357654 THAP2Q9H0W7 228 aa5.76□□□□□ -1.49
BRCA1-203ENST00000357654 SLAMF7Q9NQ25 335 aa5.76□□□□□ -1.49
BRCA1-203ENST00000357654 CTPS2Q9NRF8 586 aa5.76□□□□□ -1.49
BRCA1-203ENST00000357654 DLGAP2Q9P1A6 1054 aa5.76□□□□□ -1.49
BRCA1-203ENST00000357654 HAO1Q9UJM8 370 aa5.76□□□□□ -1.49
BRCA1-203ENST00000357654 ERVW-1Q9UQF0 538 aa5.76□□□□□ -1.49
BRCA1-203ENST00000357654 FAM234BA2RU67 622 aa5.76□□□□□ -1.49
BRCA1-203ENST00000357654 ELOA3DA6NLF2 546 aaPredicted RBP5.76□□□□□ -1.49
BRCA1-203ENST00000357654 CPNE3O75131 537 aaKnown RBP5.76□□□□□ -1.49
BRCA1-203ENST00000357654 SFTPBP07988 381 aa5.76□□□□□ -1.49
BRCA1-203ENST00000357654 PIM1P11309 404 aaPredicted RBP5.76□□□□□ -1.49
BRCA1-203ENST00000357654 HGFP14210 728 aa5.76□□□□□ -1.49
BRCA1-203ENST00000357654 EFNA1P20827 205 aaPredicted RBP5.76□□□□□ -1.49
BRCA1-203ENST00000357654 GNRHRP30968 328 aa5.76□□□□□ -1.49
BRCA1-203ENST00000357654 SSTP61278 116 aa5.76□□□□□ -1.49
BRCA1-203ENST00000357654 CDH17Q12864 832 aa5.76□□□□□ -1.49
BRCA1-203ENST00000357654 RIPK1Q13546 671 aa5.76□□□□□ -1.49
BRCA1-203ENST00000357654 SEMA5AQ13591 1074 aa5.76□□□□□ -1.49
BRCA1-203ENST00000357654 E2F2Q14209 437 aa5.76□□□□□ -1.49
BRCA1-203ENST00000357654 ZNF234Q14588 700 aa5.76□□□□□ -1.49
BRCA1-203ENST00000357654 USF2Q15853 346 aaPredicted RBP5.76□□□□□ -1.49
BRCA1-203ENST00000357654 ELOA3BQ3SY89 546 aa5.76□□□□□ -1.49
BRCA1-203ENST00000357654 AADACL4Q5VUY2 407 aa5.76□□□□□ -1.49
BRCA1-203ENST00000357654 QSOX2Q6ZRP7 698 aa5.76□□□□□ -1.49
BRCA1-203ENST00000357654 USP50Q70EL3 339 aaPredicted RBP5.76□□□□□ -1.49
BRCA1-203ENST00000357654 LINGO2Q7L985 606 aa5.76□□□□□ -1.49
BRCA1-203ENST00000357654 ZBTB46Q86UZ6 589 aa5.76□□□□□ -1.49
BRCA1-203ENST00000357654 ELOA2Q8IYF1 753 aaPredicted RBP5.76□□□□□ -1.49
BRCA1-203ENST00000357654 SPAG16Q8N0X2 631 aa5.76□□□□□ -1.49
BRCA1-203ENST00000357654 SLC34A3Q8N130 599 aa5.76□□□□□ -1.49
BRCA1-203ENST00000357654 LRRC17Q8N6Y2 441 aa5.76□□□□□ -1.49
BRCA1-203ENST00000357654 ZNF709Q8N972 641 aa5.76□□□□□ -1.49
BRCA1-203ENST00000357654 PNLDC1Q8NA58 520 aaKnown RBP5.76□□□□□ -1.49
BRCA1-203ENST00000357654 ELOA3Q8NG57 546 aa5.76□□□□□ -1.49
BRCA1-203ENST00000357654 OR10T2Q8NGX3 314 aa5.76□□□□□ -1.49
BRCA1-203ENST00000357654 PCDH19Q8TAB3 1148 aa5.76□□□□□ -1.49
BRCA1-203ENST00000357654 MYO19Q96H55 970 aa5.76□□□□□ -1.49
BRCA1-203ENST00000357654 GFM1Q96RP9 751 aaKnown RBP5.76□□□□□ -1.49
BRCA1-203ENST00000357654 BDH2Q9BUT1 245 aa5.76□□□□□ -1.49
BRCA1-203ENST00000357654 TDRD1Q9BXT4 1180 aaKnown RBP5.76□□□□□ -1.49
BRCA1-203ENST00000357654 ABHD16BQ9H3Z7 469 aa5.76□□□□□ -1.49
BRCA1-203ENST00000357654 NMUR1Q9HB89 426 aa5.76□□□□□ -1.49
BRCA1-203ENST00000357654 MRPS30Q9NP92 439 aaKnown RBP5.76□□□□□ -1.49
BRCA1-203ENST00000357654 MKKSQ9NPJ1 570 aaPredicted RBP5.76□□□□□ -1.49
BRCA1-203ENST00000357654 KBTBD4Q9NVX7 518 aa5.76□□□□□ -1.49
BRCA1-203ENST00000357654 TMPRSS11EQ9UL52 423 aa5.76□□□□□ -1.49
BRCA1-203ENST00000357654 POLR3HQ9Y535 204 aaPredicted RBP5.76□□□□□ -1.49
BRCA1-203ENST00000357654 FKBP7Q9Y680 259 aa5.76□□□□□ -1.49
BRCA1-203ENST00000357654 CHD1O14646 1710 aa5.76□□□□□ -1.49
BRCA1-203ENST00000357654 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP5.76□□□□□ -1.49
BRCA1-203ENST00000357654 TCRBV21S2A2A0A5A6 115 aa5.76□□□□□ -1.49
BRCA1-203ENST00000357654 SH2D7A6NKC9 451 aaPredicted RBP5.76□□□□□ -1.49
BRCA1-203ENST00000357654 NARSO43776 548 aaKnown RBP5.76□□□□□ -1.49
BRCA1-203ENST00000357654 CPN2P22792 545 aa5.76□□□□□ -1.49
BRCA1-203ENST00000357654 PLA2G16P53816 162 aa5.76□□□□□ -1.49
BRCA1-203ENST00000357654 IFI35P80217 286 aaPredicted RBP5.76□□□□□ -1.49
BRCA1-203ENST00000357654 C2orf80Q0P641 193 aa5.76□□□□□ -1.49
BRCA1-203ENST00000357654 PDGFRLQ15198 375 aa5.76□□□□□ -1.49
BRCA1-203ENST00000357654 HKDC1Q2TB90 917 aa5.76□□□□□ -1.49
BRCA1-203ENST00000357654 PLEKHG6Q3KR16 790 aa5.76□□□□□ -1.49
BRCA1-203ENST00000357654 PRICKLE2Q7Z3G6 844 aa5.76□□□□□ -1.49
BRCA1-203ENST00000357654 KIAA0319LQ8IZA0 1049 aa5.76□□□□□ -1.49
BRCA1-203ENST00000357654 DEFB107AQ8IZN7 70 aa5.76□□□□□ -1.49
BRCA1-203ENST00000357654 STK40Q8N2I9 435 aa5.76□□□□□ -1.49
BRCA1-203ENST00000357654 SIDT2Q8NBJ9 832 aaKnown RBP5.76□□□□□ -1.49
BRCA1-203ENST00000357654 ZNF540Q8NDQ6 660 aa5.76□□□□□ -1.49
BRCA1-203ENST00000357654 DNAJB14Q8TBM8 379 aa5.76□□□□□ -1.49
BRCA1-203ENST00000357654 UPF1Q92900 1129 aaKnown RBP eCLIP5.76□□□□□ -1.49
BRCA1-203ENST00000357654 C3orf49Q96BT1 292 aa5.76□□□□□ -1.49
BRCA1-203ENST00000357654 MMADHCQ9H3L0 296 aaPredicted RBP5.76□□□□□ -1.49
BRCA1-203ENST00000357654 DYNLRB1Q9NP97 96 aa5.76□□□□□ -1.49
BRCA1-203ENST00000357654 HPF1Q9NWY4 346 aa5.76□□□□□ -1.49
BRCA1-203ENST00000357654 NENFQ9UMX5 172 aa5.76□□□□□ -1.49
BRCA1-203ENST00000357654 ERGIC3Q9Y282 383 aa5.76□□□□□ -1.49
BRCA1-203ENST00000357654 GRIN2AQ12879 1464 aa5.75□□□□□ -1.49
BRCA1-203ENST00000357654 ATG13O75143 517 aa5.75□□□□□ -1.49
BRCA1-203ENST00000357654 COX4I1P13073 169 aa5.75□□□□□ -1.49
BRCA1-203ENST00000357654 CDC25BP30305 580 aa5.75□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms