RNA–Protein interactions for RNA: ENST00000354098.7

SHMT1-203, Transcript of serine hydroxymethyltransferase 1, humanhuman

TSL 1 (best) BASIC

Gene SHMT1, Length 1,656 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1-203ENST00000354098 FOXD2O60548 495 aaPredicted RBP21.88■■□□□ 1.09
SHMT1-203ENST00000354098 DGKAP23743 735 aa21.88■■□□□ 1.09
SHMT1-203ENST00000354098 EPHA8P29322 1005 aaPredicted RBP21.88■■□□□ 1.09
SHMT1-203ENST00000354098 CCT8P50990 548 aa21.88■■□□□ 1.09
SHMT1-203ENST00000354098 BLKP51451 505 aa21.88■■□□□ 1.09
SHMT1-203ENST00000354098 CTSCP53634 463 aa21.88■■□□□ 1.09
SHMT1-203ENST00000354098 HNRNPKP61978 463 aaKnown RBP eCLIP21.88■■□□□ 1.09
SHMT1-203ENST00000354098 STEAP4Q687X5 459 aa21.88■■□□□ 1.09
SHMT1-203ENST00000354098 NEPROQ6NW34 567 aa21.88■■□□□ 1.09
SHMT1-203ENST00000354098 CAPN12Q6ZSI9 719 aa21.88■■□□□ 1.09
SHMT1-203ENST00000354098 ZNF547Q8IVP9 402 aa21.88■■□□□ 1.09
SHMT1-203ENST00000354098 SLC25A45Q8N413 288 aa21.88■■□□□ 1.09
SHMT1-203ENST00000354098 CCL4L1Q8NHW4 92 aa21.88■■□□□ 1.09
SHMT1-203ENST00000354098 SAP25Q8TEE9 199 aa21.88■■□□□ 1.09
SHMT1-203ENST00000354098 SGF29Q96ES7 293 aa21.88■■□□□ 1.09
SHMT1-203ENST00000354098 C9orf72Q96LT7 481 aa21.88■■□□□ 1.09
SHMT1-203ENST00000354098 FAM129AQ9BZQ8 928 aa21.88■■□□□ 1.09
SHMT1-203ENST00000354098 PHACTR1Q9C0D0 580 aa21.88■■□□□ 1.09
SHMT1-203ENST00000354098 MTRF1LQ9UGC7 380 aaKnown RBP21.88■■□□□ 1.09
SHMT1-203ENST00000354098 GPSM3Q9Y4H4 160 aa21.88■■□□□ 1.09
SHMT1-203ENST00000354098 ST14Q9Y5Y6 855 aa21.88■■□□□ 1.09
SHMT1-203ENST00000354098 IGLV3-16A0A075B6K0 115 aa21.88■■□□□ 1.09
SHMT1-203ENST00000354098 LOC105378220A0A1B0GUY1 285 aaPredicted RBP21.88■■□□□ 1.09
SHMT1-203ENST00000354098 OR2AG2A6NM03 316 aa21.88■■□□□ 1.09
SHMT1-203ENST00000354098 OR1I1O60431 355 aa21.88■■□□□ 1.09
SHMT1-203ENST00000354098 F7P08709 466 aaPredicted RBP21.88■■□□□ 1.09
SHMT1-203ENST00000354098 ERVK-10P10266 1014 aa21.88■■□□□ 1.09
SHMT1-203ENST00000354098 PLA2G5P39877 138 aa21.88■■□□□ 1.09
SHMT1-203ENST00000354098 MAGEA4P43358 317 aa21.88■■□□□ 1.09
SHMT1-203ENST00000354098 HSP90AA5PQ58FG0 334 aa21.88■■□□□ 1.09
SHMT1-203ENST00000354098 TRMT10BQ6PF06 316 aaKnown RBP21.88■■□□□ 1.09
SHMT1-203ENST00000354098 CRTC3Q6UUV7 619 aa21.88■■□□□ 1.09
SHMT1-203ENST00000354098 OTUD6BQ8N6M0 293 aa21.88■■□□□ 1.09
SHMT1-203ENST00000354098 ZNF548Q8NEK5 533 aaPredicted RBP21.88■■□□□ 1.09
SHMT1-203ENST00000354098 LMX1AQ8TE12 382 aa21.88■■□□□ 1.09
SHMT1-203ENST00000354098 TBRG4Q969Z0 631 aaKnown RBP eCLIP21.88■■□□□ 1.09
SHMT1-203ENST00000354098 FMO2Q99518 471 aa21.88■■□□□ 1.09
SHMT1-203ENST00000354098 CLPBQ9H078 707 aa21.88■■□□□ 1.09
SHMT1-203ENST00000354098 H3BM21 787 aa21.87■■□□□ 1.09
SHMT1-203ENST00000354098 GRID2O43424 1007 aa21.87■■□□□ 1.09
SHMT1-203ENST00000354098 CTSEP14091 401 aa21.87■■□□□ 1.09
SHMT1-203ENST00000354098 SSTR1P30872 391 aa21.87■■□□□ 1.09
SHMT1-203ENST00000354098 THOC5Q13769 683 aaKnown RBP21.87■■□□□ 1.09
SHMT1-203ENST00000354098 UAP1L1Q3KQV9 507 aa21.87■■□□□ 1.09
SHMT1-203ENST00000354098 CERS6Q6ZMG9 384 aa21.87■■□□□ 1.09
SHMT1-203ENST00000354098 CHST15Q7LFX5 561 aaPredicted RBP21.87■■□□□ 1.09
SHMT1-203ENST00000354098 KANSL1Q7Z3B3 1105 aa21.87■■□□□ 1.09
SHMT1-203ENST00000354098 ALYREFQ86V81 257 aaKnown RBP21.87■■□□□ 1.09
SHMT1-203ENST00000354098 KCNMB4Q86W47 210 aa21.87■■□□□ 1.09
SHMT1-203ENST00000354098 GALNT13Q8IUC8 556 aa21.87■■□□□ 1.09
SHMT1-203ENST00000354098 PALM2Q8IXS6 379 aa21.87■■□□□ 1.09
SHMT1-203ENST00000354098 CLDN19Q8N6F1 224 aa21.87■■□□□ 1.09
SHMT1-203ENST00000354098 DCUN1D1Q96GG9 259 aa21.87■■□□□ 1.09
SHMT1-203ENST00000354098 ZCCHC2Q9C0B9 1178 aaKnown RBP21.87■■□□□ 1.09
SHMT1-203ENST00000354098 RMI1Q9H9A7 625 aa21.87■■□□□ 1.09
SHMT1-203ENST00000354098 PRSS21Q9Y6M0 314 aa21.87■■□□□ 1.09
SHMT1-203ENST00000354098 GVINP1Q7Z2Y8 2422 aa21.87■■□□□ 1.09
SHMT1-203ENST00000354098 FAM186AA6NE01 2351 aa21.86■■□□□ 1.09
SHMT1-203ENST00000354098 AQP9O43315 295 aa21.86■■□□□ 1.09
SHMT1-203ENST00000354098 SGTAO43765 313 aa21.86■■□□□ 1.09
SHMT1-203ENST00000354098 ATP1B2P14415 290 aaPredicted RBP21.86■■□□□ 1.09
SHMT1-203ENST00000354098 GTF2H3Q13889 308 aa21.86■■□□□ 1.09
SHMT1-203ENST00000354098 STPG1Q5TH74 334 aa21.86■■□□□ 1.09
SHMT1-203ENST00000354098 MRNIPQ6NTE8 343 aa21.86■■□□□ 1.09
SHMT1-203ENST00000354098 TMEM220Q6QAJ8 160 aa21.86■■□□□ 1.09
SHMT1-203ENST00000354098 DENND6AQ8IWF6 608 aa21.86■■□□□ 1.09
SHMT1-203ENST00000354098 BEND7Q8N7W2 519 aaPredicted RBP21.86■■□□□ 1.09
SHMT1-203ENST00000354098 GPR150Q8NGU9 434 aa21.86■■□□□ 1.09
SHMT1-203ENST00000354098 CERS2Q96G23 380 aa21.86■■□□□ 1.09
SHMT1-203ENST00000354098 OR2M4Q96R27 311 aa21.86■■□□□ 1.09
SHMT1-203ENST00000354098 IARS2Q9NSE4 1012 aaKnown RBP21.86■■□□□ 1.09
SHMT1-203ENST00000354098 SPASTQ9UBP0 616 aa21.86■■□□□ 1.09
SHMT1-203ENST00000354098 TDRD6O60522 2096 aaKnown RBP21.86■■□□□ 1.09
SHMT1-203ENST00000354098 GPR89AB7ZAQ6 455 aa21.85■■□□□ 1.09
SHMT1-203ENST00000354098 GPR89BP0CG08 455 aa21.85■■□□□ 1.09
SHMT1-203ENST00000354098 ZNF883P0CG24 379 aa21.85■■□□□ 1.09
SHMT1-203ENST00000354098 MYBL2P10244 700 aa21.85■■□□□ 1.09
SHMT1-203ENST00000354098 GPX6P59796 221 aa21.85■■□□□ 1.09
SHMT1-203ENST00000354098 CTBP1Q13363 440 aa21.85■■□□□ 1.09
SHMT1-203ENST00000354098 PLA2G4EQ3MJ16 856 aa21.85■■□□□ 1.09
SHMT1-203ENST00000354098 AARS2Q5JTZ9 985 aaKnown RBP21.85■■□□□ 1.09
SHMT1-203ENST00000354098 LYPLAL1Q5VWZ2 237 aa21.85■■□□□ 1.09
SHMT1-203ENST00000354098 ZNF470Q6ECI4 717 aa21.85■■□□□ 1.09
SHMT1-203ENST00000354098 LRRTM4Q86VH4 590 aa21.85■■□□□ 1.09
SHMT1-203ENST00000354098 CILP2Q8IUL8 1156 aa21.85■■□□□ 1.09
SHMT1-203ENST00000354098 TRAPPC5Q8IUR0 188 aa21.85■■□□□ 1.09
SHMT1-203ENST00000354098 GSPT2Q8IYD1 628 aaKnown RBP21.85■■□□□ 1.09
SHMT1-203ENST00000354098 SLC23A2Q9UGH3 650 aa21.85■■□□□ 1.09
SHMT1-203ENST00000354098 CFAP99D6REC4 459 aa21.85■■□□□ 1.09
SHMT1-203ENST00000354098 YKT6O15498 198 aa21.85■■□□□ 1.09
SHMT1-203ENST00000354098 PCDHGA12O60330 932 aa21.85■■□□□ 1.09
SHMT1-203ENST00000354098 RALBP11234 206 aa21.85■■□□□ 1.09
SHMT1-203ENST00000354098 AK4P27144 223 aaPredicted RBP21.85■■□□□ 1.09
SHMT1-203ENST00000354098 PMLP29590 882 aa21.85■■□□□ 1.09
SHMT1-203ENST00000354098 TTPAP49638 278 aa21.85■■□□□ 1.09
SHMT1-203ENST00000354098 CTBSQ01459 385 aa21.85■■□□□ 1.09
SHMT1-203ENST00000354098 ITIH4Q14624 930 aa21.85■■□□□ 1.09
SHMT1-203ENST00000354098 ZNF789Q5FWF6 425 aa21.85■■□□□ 1.09
SHMT1-203ENST00000354098 C11orf96Q7Z7L8 435 aa21.85■■□□□ 1.09
SHMT1-203ENST00000354098 SDCCAG8Q86SQ7 713 aaPredicted RBP21.85■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms