RNA–Protein interactions for RNA: ENST00000352393.8

CPNE1-202, Transcript of copine 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE1, Length 2,147 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-202ENST00000352393 GLTPD2A6NH11 291 aa24.29■■□□□ 1.48
CPNE1-202ENST00000352393 H0Y858 1186 aa24.29■■□□□ 1.48
CPNE1-202ENST00000352393 ENPP3O14638 875 aa24.29■■□□□ 1.48
CPNE1-202ENST00000352393 CPNE6O95741 557 aa24.29■■□□□ 1.48
CPNE1-202ENST00000352393 TSPAN12O95859 305 aa24.29■■□□□ 1.48
CPNE1-202ENST00000352393 SOX11P35716 441 aa24.29■■□□□ 1.48
CPNE1-202ENST00000352393 AARS2Q5JTZ9 985 aaKnown RBP24.29■■□□□ 1.48
CPNE1-202ENST00000352393 GNASQ5JWF2 1037 aa24.29■■□□□ 1.48
CPNE1-202ENST00000352393 SCIMPQ6UWF3 145 aa24.29■■□□□ 1.48
CPNE1-202ENST00000352393 ZFAND4Q86XD8 727 aa24.29■■□□□ 1.48
CPNE1-202ENST00000352393 NKAPQ8N5F7 415 aaKnown RBP24.29■■□□□ 1.48
CPNE1-202ENST00000352393 DPP10Q8N608 796 aa24.29■■□□□ 1.48
CPNE1-202ENST00000352393 KLHDC9Q8NEP7 349 aa24.29■■□□□ 1.48
CPNE1-202ENST00000352393 PNPT1Q8TCS8 783 aaKnown RBP24.29■■□□□ 1.48
CPNE1-202ENST00000352393 ACOX2Q99424 681 aa24.29■■□□□ 1.48
CPNE1-202ENST00000352393 HGH1Q9BTY7 390 aa24.29■■□□□ 1.48
CPNE1-202ENST00000352393 CHID1Q9BWS9 393 aa24.29■■□□□ 1.48
CPNE1-202ENST00000352393 TLR9Q9NR96 1032 aa24.29■■□□□ 1.48
CPNE1-202ENST00000352393 FAIMQ9NVQ4 179 aa24.29■■□□□ 1.48
CPNE1-202ENST00000352393 MTPAPQ9NVV4 582 aaKnown RBP eCLIP24.29■■□□□ 1.48
CPNE1-202ENST00000352393 GALPQ9UBC7 116 aa24.29■■□□□ 1.48
CPNE1-202ENST00000352393 GREB1Q4ZG55 1949 aa24.29■■□□□ 1.48
CPNE1-202ENST00000352393 NCF1BA6NI72 391 aaPredicted RBP24.29■■□□□ 1.48
CPNE1-202ENST00000352393 NCF1CA8MVU1 366 aaPredicted RBP24.29■■□□□ 1.48
CPNE1-202ENST00000352393 DUSP11O75319 330 aaKnown RBP24.29■■□□□ 1.48
CPNE1-202ENST00000352393 OAZ2O95190 189 aa24.29■■□□□ 1.48
CPNE1-202ENST00000352393 NCF1P14598 390 aaPredicted RBP24.29■■□□□ 1.48
CPNE1-202ENST00000352393 CASP2P42575 452 aa24.29■■□□□ 1.48
CPNE1-202ENST00000352393 SCNN1BP51168 640 aa24.29■■□□□ 1.48
CPNE1-202ENST00000352393 RBBP7Q16576 425 aa24.29■■□□□ 1.48
CPNE1-202ENST00000352393 C6orf136Q5SQH8 315 aa24.29■■□□□ 1.48
CPNE1-202ENST00000352393 OR56A4Q8NGH8 313 aa24.29■■□□□ 1.48
CPNE1-202ENST00000352393 PROKR1Q8TCW9 393 aa24.29■■□□□ 1.48
CPNE1-202ENST00000352393 CNDP2Q96KP4 475 aaKnown RBP24.29■■□□□ 1.48
CPNE1-202ENST00000352393 SEPHS2Q99611 448 aa24.29■■□□□ 1.48
CPNE1-202ENST00000352393 TUBA1CQ9BQE3 449 aa24.29■■□□□ 1.48
CPNE1-202ENST00000352393 MGME1Q9BQP7 344 aa24.29■■□□□ 1.48
CPNE1-202ENST00000352393 RIC8BQ9NVN3 520 aa24.29■■□□□ 1.48
CPNE1-202ENST00000352393 MARCH2Q9P0N8 246 aa24.29■■□□□ 1.48
CPNE1-202ENST00000352393 A0A1W2PPW3 197 aa24.28■■□□□ 1.48
CPNE1-202ENST00000352393 FAM92AA1XBS5 289 aa24.28■■□□□ 1.48
CPNE1-202ENST00000352393 IQCA1LA6NCM1 817 aa24.28■■□□□ 1.48
CPNE1-202ENST00000352393 INPPL1O15357 1258 aa24.28■■□□□ 1.48
CPNE1-202ENST00000352393 CDH1P12830 882 aa24.28■■□□□ 1.48
CPNE1-202ENST00000352393 PSMA3P25788 255 aa24.28■■□□□ 1.48
CPNE1-202ENST00000352393 THPOP40225 353 aa24.28■■□□□ 1.48
CPNE1-202ENST00000352393 CRY1Q16526 586 aa24.28■■□□□ 1.48
CPNE1-202ENST00000352393 GPRIN3Q6ZVF9 776 aa24.28■■□□□ 1.48
CPNE1-202ENST00000352393 ZNF598Q86UK7 904 aaKnown RBP24.28■■□□□ 1.48
CPNE1-202ENST00000352393 SMYD1Q8NB12 490 aa24.28■■□□□ 1.48
CPNE1-202ENST00000352393 BDH2Q9BUT1 245 aa24.28■■□□□ 1.48
CPNE1-202ENST00000352393 PFDN4Q9NQP4 134 aa24.28■■□□□ 1.48
CPNE1-202ENST00000352393 TMEM9Q9P0T7 183 aa24.28■■□□□ 1.48
CPNE1-202ENST00000352393 IFT80Q9P2H3 777 aaPredicted RBP24.28■■□□□ 1.48
CPNE1-202ENST00000352393 MAGEL2Q9UJ55 1249 aa24.28■■□□□ 1.48
CPNE1-202ENST00000352393 PCDHB3Q9Y5E6 796 aa24.28■■□□□ 1.48
CPNE1-202ENST00000352393 NDUFS3O75489 264 aa24.28■■□□□ 1.48
CPNE1-202ENST00000352393 HMBSP08397 361 aa24.28■■□□□ 1.48
CPNE1-202ENST00000352393 HK3P52790 923 aa24.28■■□□□ 1.48
CPNE1-202ENST00000352393 NFE2Q16621 373 aaPredicted RBP24.28■■□□□ 1.48
CPNE1-202ENST00000352393 NADSYN1Q6IA69 706 aa24.28■■□□□ 1.48
CPNE1-202ENST00000352393 SLC2A7Q6PXP3 512 aa24.28■■□□□ 1.48
CPNE1-202ENST00000352393 ZNF554Q86TJ5 538 aa24.28■■□□□ 1.48
CPNE1-202ENST00000352393 HID1Q8IV36 788 aa24.28■■□□□ 1.48
CPNE1-202ENST00000352393 PDPRQ8NCN5 879 aa24.28■■□□□ 1.48
CPNE1-202ENST00000352393 OR4K2Q8NGD2 314 aa24.28■■□□□ 1.48
CPNE1-202ENST00000352393 TBC1D15Q8TC07 691 aa24.28■■□□□ 1.48
CPNE1-202ENST00000352393 MIPOL1Q8TD10 442 aa24.28■■□□□ 1.48
CPNE1-202ENST00000352393 NSMCE2Q96MF7 247 aa24.28■■□□□ 1.48
CPNE1-202ENST00000352393 NSMCE3Q96MG7 304 aa24.28■■□□□ 1.48
CPNE1-202ENST00000352393 NAA50Q9GZZ1 169 aaKnown RBP24.28■■□□□ 1.48
CPNE1-202ENST00000352393 NTN4Q9HB63 628 aa24.28■■□□□ 1.48
CPNE1-202ENST00000352393 OLA1Q9NTK5 396 aaKnown RBP24.28■■□□□ 1.48
CPNE1-202ENST00000352393 ASB1Q9Y576 335 aa24.28■■□□□ 1.48
CPNE1-202ENST00000352393 V9GYQ6 96 aa24.28■■□□□ 1.48
CPNE1-202ENST00000352393 HOXD9P28356 352 aaPredicted RBP24.27■■□□□ 1.48
CPNE1-202ENST00000352393 YAP1P46937 504 aaKnown RBP24.27■■□□□ 1.48
CPNE1-202ENST00000352393 GRSF1Q12849 480 aaKnown RBP eCLIP24.27■■□□□ 1.483e-10■□□□□ 10.9
CPNE1-202ENST00000352393 PTPRNQ16849 979 aa24.27■■□□□ 1.48
CPNE1-202ENST00000352393 ITFG2Q969R8 447 aa24.27■■□□□ 1.48
CPNE1-202ENST00000352393 ZNF382Q96SR6 550 aa24.27■■□□□ 1.48
CPNE1-202ENST00000352393 HEBP1Q9NRV9 189 aa24.27■■□□□ 1.48
CPNE1-202ENST00000352393 EIF2B4Q9UI10 523 aaKnown RBP24.27■■□□□ 1.48
CPNE1-202ENST00000352393 UPK1AO00322 258 aa24.26■■□□□ 1.47
CPNE1-202ENST00000352393 E2F3O00716 465 aa24.26■■□□□ 1.47
CPNE1-202ENST00000352393 PRSS23O95084 383 aa24.26■■□□□ 1.47
CPNE1-202ENST00000352393 PLCL1Q15111 1095 aa24.26■■□□□ 1.47
CPNE1-202ENST00000352393 FGD3Q5JSP0 725 aa24.26■■□□□ 1.47
CPNE1-202ENST00000352393 ZNF773Q6PK81 442 aa24.26■■□□□ 1.47
CPNE1-202ENST00000352393 DLEU7Q6UYE1 221 aa24.26■■□□□ 1.47
CPNE1-202ENST00000352393 PRR23BQ6ZRT6 265 aa24.26■■□□□ 1.47
CPNE1-202ENST00000352393 TTC9BQ8N6N2 239 aa24.26■■□□□ 1.47
CPNE1-202ENST00000352393 FNDC5Q8NAU1 212 aa24.26■■□□□ 1.47
CPNE1-202ENST00000352393 TRPV1Q8NER1 839 aa24.26■■□□□ 1.47
CPNE1-202ENST00000352393 FBXO32Q969P5 355 aa24.26■■□□□ 1.47
CPNE1-202ENST00000352393 THAP11Q96EK4 314 aa24.26■■□□□ 1.47
CPNE1-202ENST00000352393 RNF145Q96MT1 663 aa24.26■■□□□ 1.47
CPNE1-202ENST00000352393 CHCHD3Q9NX63 227 aaKnown RBP24.26■■□□□ 1.47
CPNE1-202ENST00000352393 PCDHGA11Q9Y5H2 935 aa24.26■■□□□ 1.47
CPNE1-202ENST00000352393 SLC12A8A0AV02 714 aa24.26■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms