RNA–Protein interactions for RNA: ENST00000351808.9

IFT88-202, Transcript of intraflagellar transport 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IFT88, Length 2,856 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-202ENST00000351808 GGA3Q9NZ52 723 aa13.14□□□□□ -0.31
IFT88-202ENST00000351808 ARHGEF9O43307 516 aa13.14□□□□□ -0.31
IFT88-202ENST00000351808 FTH1P02794 183 aa13.14□□□□□ -0.31
IFT88-202ENST00000351808 FAPQ12884 760 aa13.14□□□□□ -0.31
IFT88-202ENST00000351808 NFYCQ13952 458 aa13.14□□□□□ -0.31
IFT88-202ENST00000351808 SULT1C3Q6IMI6 304 aa13.14□□□□□ -0.31
IFT88-202ENST00000351808 LHFPL5Q8TAF8 219 aa13.14□□□□□ -0.31
IFT88-202ENST00000351808 MSTO1Q9BUK6 570 aa13.14□□□□□ -0.31
IFT88-202ENST00000351808 MMP28Q9H239 520 aa13.14□□□□□ -0.31
IFT88-202ENST00000351808 FBXO10Q9UK96 956 aa13.14□□□□□ -0.31
IFT88-202ENST00000351808 OAS3Q9Y6K5 1087 aaKnown RBP13.14□□□□□ -0.31
IFT88-202ENST00000351808 H3BMM5 538 aa13.14□□□□□ -0.31
IFT88-202ENST00000351808 UBXN8O00124 270 aa13.14□□□□□ -0.31
IFT88-202ENST00000351808 AIREO43918 545 aa13.14□□□□□ -0.31
IFT88-202ENST00000351808 HS6ST1O60243 411 aa13.14□□□□□ -0.31
IFT88-202ENST00000351808 PGK1P00558 417 aa13.14□□□□□ -0.31
IFT88-202ENST00000351808 MYL3P08590 195 aa13.14□□□□□ -0.31
IFT88-202ENST00000351808 CASP2P42575 452 aa13.14□□□□□ -0.31
IFT88-202ENST00000351808 BCAT1P54687 386 aa13.14□□□□□ -0.31
IFT88-202ENST00000351808 FCGRTP55899 365 aa13.14□□□□□ -0.31
IFT88-202ENST00000351808 IRF3Q14653 427 aa13.14□□□□□ -0.31
IFT88-202ENST00000351808 PSMD5Q16401 504 aa13.14□□□□□ -0.31
IFT88-202ENST00000351808 FAM83EQ2M2I3 478 aa13.14□□□□□ -0.31
IFT88-202ENST00000351808 PLEKHG6Q3KR16 790 aa13.14□□□□□ -0.31
IFT88-202ENST00000351808 ZNF691Q5VV52 312 aa13.14□□□□□ -0.31
IFT88-202ENST00000351808 CEP97Q8IW35 865 aa13.14□□□□□ -0.31
IFT88-202ENST00000351808 FLCNQ8NFG4 579 aa13.14□□□□□ -0.31
IFT88-202ENST00000351808 UBA3Q8TBC4 463 aa13.14□□□□□ -0.31
IFT88-202ENST00000351808 TMEM80Q96HE8 168 aa13.14□□□□□ -0.31
IFT88-202ENST00000351808 AKTIPQ9H8T0 292 aa13.14□□□□□ -0.31
IFT88-202ENST00000351808 AGO1Q9UL18 857 aaKnown RBP13.14□□□□□ -0.31
IFT88-202ENST00000351808 PTGDR2Q9Y5Y4 395 aa13.14□□□□□ -0.31
IFT88-202ENST00000351808 SLC12A8A0AV02 714 aa13.13□□□□□ -0.31
IFT88-202ENST00000351808 FAM92AA1XBS5 289 aa13.13□□□□□ -0.31
IFT88-202ENST00000351808 PRSS23O95084 383 aa13.13□□□□□ -0.31
IFT88-202ENST00000351808 ZNF250P15622 560 aa13.13□□□□□ -0.31
IFT88-202ENST00000351808 ITGA2P17301 1181 aa13.13□□□□□ -0.31
IFT88-202ENST00000351808 RFX2P48378 723 aa13.13□□□□□ -0.31
IFT88-202ENST00000351808 SOX9P48436 509 aa13.13□□□□□ -0.31
IFT88-202ENST00000351808 CDH8P55286 799 aa13.13□□□□□ -0.31
IFT88-202ENST00000351808 OR4D2P58180 307 aa13.13□□□□□ -0.31
IFT88-202ENST00000351808 RAPSNQ13702 412 aa13.13□□□□□ -0.31
IFT88-202ENST00000351808 PON2Q15165 354 aa13.13□□□□□ -0.31
IFT88-202ENST00000351808 SPANXN2Q5MJ10 180 aa13.13□□□□□ -0.31
IFT88-202ENST00000351808 LAIR1Q6GTX8 287 aa13.13□□□□□ -0.31
IFT88-202ENST00000351808 TMEM135Q86UB9 458 aa13.13□□□□□ -0.31
IFT88-202ENST00000351808 ZC3HC1Q86WB0 502 aaKnown RBP13.13□□□□□ -0.31
IFT88-202ENST00000351808 TMEM199Q8N511 208 aa13.13□□□□□ -0.31
IFT88-202ENST00000351808 AMER2Q8N7J2 671 aa13.13□□□□□ -0.31
IFT88-202ENST00000351808 DNAAF3Q8N9W5 541 aa13.13□□□□□ -0.31
IFT88-202ENST00000351808 OR4M2Q8NGB6 313 aa13.13□□□□□ -0.31
IFT88-202ENST00000351808 NSMCE2Q96MF7 247 aa13.13□□□□□ -0.31
IFT88-202ENST00000351808 OR2A14Q96R47 310 aa13.13□□□□□ -0.31
IFT88-202ENST00000351808 UQCC2Q9BRT2 126 aa13.13□□□□□ -0.31
IFT88-202ENST00000351808 RNF167Q9H6Y7 350 aa13.13□□□□□ -0.31
IFT88-202ENST00000351808 ACOT13Q9NPJ3 140 aa13.13□□□□□ -0.31
IFT88-202ENST00000351808 SLAMF8Q9P0V8 285 aa13.13□□□□□ -0.31
IFT88-202ENST00000351808 KCNH4Q9UQ05 1017 aa13.13□□□□□ -0.31
IFT88-202ENST00000351808 HPRP00739 348 aa13.13□□□□□ -0.31
IFT88-202ENST00000351808 CYBBP04839 570 aa13.13□□□□□ -0.31
IFT88-202ENST00000351808 MSH3P20585 1137 aa13.13□□□□□ -0.31
IFT88-202ENST00000351808 CSRP3P50461 194 aa13.13□□□□□ -0.31
IFT88-202ENST00000351808 SLC35A2P78381 396 aa13.13□□□□□ -0.31
IFT88-202ENST00000351808 TCP10Q12799 353 aa13.13□□□□□ -0.31
IFT88-202ENST00000351808 FADDQ13158 208 aa13.13□□□□□ -0.31
IFT88-202ENST00000351808 SOWAHCQ53LP3 525 aaPredicted RBP13.13□□□□□ -0.31
IFT88-202ENST00000351808 SPESP1Q6UW49 350 aa13.13□□□□□ -0.31
IFT88-202ENST00000351808 B3GNT8Q7Z7M8 397 aa13.13□□□□□ -0.31
IFT88-202ENST00000351808 PHF21BQ96EK2 531 aa13.13□□□□□ -0.31
IFT88-202ENST00000351808 REXO5Q96IC2 774 aaKnown RBP13.13□□□□□ -0.31
IFT88-202ENST00000351808 GMCL1Q96IK5 515 aa13.13□□□□□ -0.31
IFT88-202ENST00000351808 RDH12Q96NR8 316 aa13.13□□□□□ -0.31
IFT88-202ENST00000351808 ZNF670Q9BS34 389 aa13.13□□□□□ -0.31
IFT88-202ENST00000351808 AGO4Q9HCK5 861 aaKnown RBP13.13□□□□□ -0.31
IFT88-202ENST00000351808 EIF3KQ9UBQ5 218 aaKnown RBP13.13□□□□□ -0.31
IFT88-202ENST00000351808 TCEAL9Q9UHQ7 104 aa13.13□□□□□ -0.31
IFT88-202ENST00000351808 CLDN24A6NM45 220 aa13.12□□□□□ -0.31
IFT88-202ENST00000351808 CYP7B1O75881 506 aa13.12□□□□□ -0.31
IFT88-202ENST00000351808 SNX4O95219 450 aa13.12□□□□□ -0.31
IFT88-202ENST00000351808 ATP5F1P24539 256 aaPredicted RBP13.12□□□□□ -0.31
IFT88-202ENST00000351808 LIPAP38571 399 aa13.12□□□□□ -0.31
IFT88-202ENST00000351808 NKX3-2P78367 333 aa13.12□□□□□ -0.31
IFT88-202ENST00000351808 GHRHRQ02643 423 aa13.12□□□□□ -0.31
IFT88-202ENST00000351808 ZNF267Q14586 743 aaPredicted RBP13.12□□□□□ -0.31
IFT88-202ENST00000351808 CERCAMQ5T4B2 595 aa13.12□□□□□ -0.31
IFT88-202ENST00000351808 PLEKHM3Q6ZWE6 761 aa13.12□□□□□ -0.31
IFT88-202ENST00000351808 RNF135Q8IUD6 432 aa13.12□□□□□ -0.31
IFT88-202ENST00000351808 ZMIZ2Q8NF64 920 aa13.12□□□□□ -0.31
IFT88-202ENST00000351808 HDHD5Q9BXW7 423 aa13.12□□□□□ -0.31
IFT88-202ENST00000351808 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.12□□□□□ -0.31
IFT88-202ENST00000351808 MUC13Q9H3R2 512 aa13.12□□□□□ -0.31
IFT88-202ENST00000351808 DUSP21Q9H596 190 aa13.12□□□□□ -0.31
IFT88-202ENST00000351808 ZNF556Q9HAH1 456 aa13.12□□□□□ -0.31
IFT88-202ENST00000351808 ANKEF1Q9NU02 776 aa13.12□□□□□ -0.31
IFT88-202ENST00000351808 MKLN1Q9UL63 735 aa13.12□□□□□ -0.31
IFT88-202ENST00000351808 KLHL20Q9Y2M5 609 aa13.12□□□□□ -0.31
IFT88-202ENST00000351808 LOC110117498-PIK3R3F6TDL0 507 aa13.12□□□□□ -0.31
IFT88-202ENST00000351808 M0QYV0 167 aa13.12□□□□□ -0.31
IFT88-202ENST00000351808 MED7O43513 233 aa13.12□□□□□ -0.31
IFT88-202ENST00000351808 ATP4BP51164 291 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms