RNA–Protein interactions for RNA: ENST00000349124.2

PTP4A3-202, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

TSL 1 (best) BASIC

Gene PTP4A3, Length 2,710 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-202ENST00000349124 KCNA10Q16322 511 aa17.92■□□□□ 0.46
PTP4A3-202ENST00000349124 C6orf136Q5SQH8 315 aa17.92■□□□□ 0.46
PTP4A3-202ENST00000349124 C17orf99Q6UX52 265 aa17.92■□□□□ 0.46
PTP4A3-202ENST00000349124 TMEM26Q6ZUK4 368 aa17.92■□□□□ 0.46
PTP4A3-202ENST00000349124 ALDH16A1Q8IZ83 802 aa17.92■□□□□ 0.46
PTP4A3-202ENST00000349124 DHRSXQ8N5I4 330 aa17.92■□□□□ 0.46
PTP4A3-202ENST00000349124 EFHBQ8N7U6 833 aa17.92■□□□□ 0.46
PTP4A3-202ENST00000349124 NLE1Q9NVX2 485 aaPredicted RBP17.92■□□□□ 0.46
PTP4A3-202ENST00000349124 ANAPC2Q9UJX6 822 aa17.92■□□□□ 0.46
PTP4A3-202ENST00000349124 PCDHB5Q9Y5E4 795 aa17.92■□□□□ 0.46
PTP4A3-202ENST00000349124 ESRRBO95718 433 aa17.92■□□□□ 0.46
PTP4A3-202ENST00000349124 RPS9P46781 194 aaKnown RBP17.92■□□□□ 0.46
PTP4A3-202ENST00000349124 ESRRGP62508 458 aa17.92■□□□□ 0.46
PTP4A3-202ENST00000349124 IRAK1BP1Q5VVH5 260 aa17.92■□□□□ 0.46
PTP4A3-202ENST00000349124 DUS1LQ6P1R4 473 aaKnown RBP17.92■□□□□ 0.46
PTP4A3-202ENST00000349124 ELMSAN1Q6PJG2 1045 aa17.92■□□□□ 0.46
PTP4A3-202ENST00000349124 TMEM199Q8N511 208 aa17.92■□□□□ 0.46
PTP4A3-202ENST00000349124 PACRGLQ8N7B6 248 aa17.92■□□□□ 0.46
PTP4A3-202ENST00000349124 LPCAT1Q8NF37 534 aa17.92■□□□□ 0.46
PTP4A3-202ENST00000349124 UROC1Q96N76 676 aa17.92■□□□□ 0.46
PTP4A3-202ENST00000349124 TRIM54Q9BYV2 358 aa17.92■□□□□ 0.46
PTP4A3-202ENST00000349124 H0Y858 1186 aa17.91■□□□□ 0.46
PTP4A3-202ENST00000349124 SCAMP3O14828 347 aaKnown RBP17.91■□□□□ 0.46
PTP4A3-202ENST00000349124 KATNA1O75449 491 aa17.91■□□□□ 0.46
PTP4A3-202ENST00000349124 RSL1D1O76021 490 aaKnown RBP17.91■□□□□ 0.46
PTP4A3-202ENST00000349124 EPOP01588 193 aa17.91■□□□□ 0.46
PTP4A3-202ENST00000349124 TFPTP0C1Z6 253 aa17.91■□□□□ 0.46
PTP4A3-202ENST00000349124 ELK4P28324 431 aa17.91■□□□□ 0.46
PTP4A3-202ENST00000349124 XKR7Q5GH72 579 aa17.91■□□□□ 0.46
PTP4A3-202ENST00000349124 TMTC4Q5T4D3 741 aa17.91■□□□□ 0.46
PTP4A3-202ENST00000349124 CST9Q5W186 159 aa17.91■□□□□ 0.46
PTP4A3-202ENST00000349124 OGFOD2Q6N063 350 aa17.91■□□□□ 0.46
PTP4A3-202ENST00000349124 LETMD1Q6P1Q0 360 aa17.91■□□□□ 0.46
PTP4A3-202ENST00000349124 SGCDQ92629 289 aa17.91■□□□□ 0.46
PTP4A3-202ENST00000349124 LINGO1Q96FE5 620 aa17.91■□□□□ 0.46
PTP4A3-202ENST00000349124 GPR62Q9BZJ7 368 aa17.91■□□□□ 0.46
PTP4A3-202ENST00000349124 TLR9Q9NR96 1032 aa17.91■□□□□ 0.46
PTP4A3-202ENST00000349124 CD274Q9NZQ7 290 aa17.91■□□□□ 0.46
PTP4A3-202ENST00000349124 TDRKHQ9Y2W6 561 aaKnown RBP17.91■□□□□ 0.46
PTP4A3-202ENST00000349124 A0A1W2PPW3 197 aa17.91■□□□□ 0.46
PTP4A3-202ENST00000349124 IQCA1LA6NCM1 817 aa17.91■□□□□ 0.46
PTP4A3-202ENST00000349124 TRIM64CA6NLI5 447 aa17.91■□□□□ 0.46
PTP4A3-202ENST00000349124 RAB39AQ14964 217 aa17.91■□□□□ 0.46
PTP4A3-202ENST00000349124 C16orf72Q14CZ0 275 aa17.91■□□□□ 0.46
PTP4A3-202ENST00000349124 FGD3Q5JSP0 725 aa17.91■□□□□ 0.46
PTP4A3-202ENST00000349124 CTSL3PQ5NE16 218 aa17.91■□□□□ 0.46
PTP4A3-202ENST00000349124 FAM171A1Q5VUB5 890 aa17.91■□□□□ 0.46
PTP4A3-202ENST00000349124 ANKRD34AQ69YU3 496 aa17.91■□□□□ 0.46
PTP4A3-202ENST00000349124 GLB1LQ6UWU2 654 aa17.91■□□□□ 0.46
PTP4A3-202ENST00000349124 COLGALT2Q8IYK4 626 aa17.91■□□□□ 0.46
PTP4A3-202ENST00000349124 SFRP1Q8N474 314 aa17.91■□□□□ 0.46
PTP4A3-202ENST00000349124 TRIB2Q92519 343 aa17.91■□□□□ 0.46
PTP4A3-202ENST00000349124 SEPT8Q92599 483 aa17.91■□□□□ 0.46
PTP4A3-202ENST00000349124 POPDC3Q9HBV1 291 aa17.91■□□□□ 0.46
PTP4A3-202ENST00000349124 SMPD3Q9NY59 655 aaPredicted RBP17.91■□□□□ 0.46
PTP4A3-202ENST00000349124 ZFP37Q9Y6Q3 630 aaPredicted RBP17.91■□□□□ 0.46
PTP4A3-202ENST00000349124 E2F3O00716 465 aa17.9■□□□□ 0.46
PTP4A3-202ENST00000349124 TLR5O60602 858 aa17.9■□□□□ 0.46
PTP4A3-202ENST00000349124 EEDO75530 441 aaKnown RBP17.9■□□□□ 0.46
PTP4A3-202ENST00000349124 GPIP06744 558 aa17.9■□□□□ 0.46
PTP4A3-202ENST00000349124 TCF3P15923 654 aa17.9■□□□□ 0.46
PTP4A3-202ENST00000349124 GGT5P36269 586 aa17.9■□□□□ 0.46
PTP4A3-202ENST00000349124 SGSHP51688 502 aa17.9■□□□□ 0.46
PTP4A3-202ENST00000349124 IST1P53990 364 aa17.9■□□□□ 0.46
PTP4A3-202ENST00000349124 PPP1R8Q12972 351 aaKnown RBP17.9■□□□□ 0.46
PTP4A3-202ENST00000349124 NFE2Q16621 373 aaPredicted RBP17.9■□□□□ 0.46
PTP4A3-202ENST00000349124 GLYATQ6IB77 296 aa17.9■□□□□ 0.46
PTP4A3-202ENST00000349124 KCTD8Q6ZWB6 473 aa17.9■□□□□ 0.46
PTP4A3-202ENST00000349124 SPATA19Q7Z5L4 167 aa17.9■□□□□ 0.46
PTP4A3-202ENST00000349124 SEZ6LQ9BYH1 1024 aa17.9■□□□□ 0.46
PTP4A3-202ENST00000349124 NTN4Q9HB63 628 aa17.9■□□□□ 0.46
PTP4A3-202ENST00000349124 GABRQQ9UN88 632 aa17.9■□□□□ 0.46
PTP4A3-202ENST00000349124 TANC1Q9C0D5 1861 aa17.9■□□□□ 0.46
PTP4A3-202ENST00000349124 UROSP10746 265 aa17.9■□□□□ 0.46
PTP4A3-202ENST00000349124 G6PDP11413 515 aa17.9■□□□□ 0.46
PTP4A3-202ENST00000349124 CAPGP40121 348 aa17.9■□□□□ 0.46
PTP4A3-202ENST00000349124 PIK3CGP48736 1102 aa17.9■□□□□ 0.46
PTP4A3-202ENST00000349124 HUNKP57058 714 aa17.9■□□□□ 0.46
PTP4A3-202ENST00000349124 YBEYP58557 167 aaPredicted RBP17.9■□□□□ 0.46
PTP4A3-202ENST00000349124 GNA12Q03113 381 aa17.9■□□□□ 0.46
PTP4A3-202ENST00000349124 ZRANB3Q5FWF4 1079 aa17.9■□□□□ 0.46
PTP4A3-202ENST00000349124 XKR5Q6UX68 686 aa17.9■□□□□ 0.46
PTP4A3-202ENST00000349124 PTRH1Q86Y79 214 aaKnown RBP17.9■□□□□ 0.46
PTP4A3-202ENST00000349124 GPSM1Q86YR5 675 aa17.9■□□□□ 0.46
PTP4A3-202ENST00000349124 FAM86B1Q8N7N1 296 aa17.9■□□□□ 0.46
PTP4A3-202ENST00000349124 NAT16Q8N8M0 369 aa17.9■□□□□ 0.46
PTP4A3-202ENST00000349124 MUS81Q96NY9 551 aa17.9■□□□□ 0.46
PTP4A3-202ENST00000349124 INTS10Q9NVR2 710 aaKnown RBP17.9■□□□□ 0.46
PTP4A3-202ENST00000349124 HACD3Q9P035 362 aa17.9■□□□□ 0.46
PTP4A3-202ENST00000349124 SCN10AQ9Y5Y9 1956 aa17.9■□□□□ 0.46
PTP4A3-202ENST00000349124 PRAMEF12O95522 483 aa17.89■□□□□ 0.45
PTP4A3-202ENST00000349124 LDLRP01130 860 aa17.89■□□□□ 0.45
PTP4A3-202ENST00000349124 IGLV3-27P01718 113 aa17.89■□□□□ 0.45
PTP4A3-202ENST00000349124 CNPP09543 421 aaKnown RBP17.89■□□□□ 0.45
PTP4A3-202ENST00000349124 MC4RP32245 332 aa17.89■□□□□ 0.45
PTP4A3-202ENST00000349124 DSC1Q08554 894 aa17.89■□□□□ 0.45
PTP4A3-202ENST00000349124 DUSP4Q13115 394 aa17.89■□□□□ 0.45
PTP4A3-202ENST00000349124 LINGO4Q6UY18 593 aa17.89■□□□□ 0.45
PTP4A3-202ENST00000349124 RNF19BQ6ZMZ0 732 aa17.89■□□□□ 0.45
PTP4A3-202ENST00000349124 GPRIN3Q6ZVF9 776 aa17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms