RNA–Protein interactions for RNA: ENST00000348495.10

SSBP4-202, Transcript of single stranded DNA binding protein 4, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SSBP4, Length 1,721 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-202ENST00000348495 STMN4Q9H169 189 aaPredicted RBP26.75■■□□□ 1.87
SSBP4-202ENST00000348495 MED4Q9NPJ6 270 aa26.75■■□□□ 1.87
SSBP4-202ENST00000348495 GNPTGQ9UJJ9 305 aa26.75■■□□□ 1.87
SSBP4-202ENST00000348495 HS3ST3A1Q9Y663 406 aa26.75■■□□□ 1.87
SSBP4-202ENST00000348495 CFAP99D6REC4 459 aa26.74■■□□□ 1.87
SSBP4-202ENST00000348495 PRAMEF26H0Y7S4 382 aa26.74■■□□□ 1.87
SSBP4-202ENST00000348495 FPGTO14772 594 aa26.74■■□□□ 1.87
SSBP4-202ENST00000348495 HOXC4P09017 264 aaPredicted RBP26.74■■□□□ 1.87
SSBP4-202ENST00000348495 RALBP11234 206 aa26.74■■□□□ 1.87
SSBP4-202ENST00000348495 CD9P21926 228 aa26.74■■□□□ 1.87
SSBP4-202ENST00000348495 FDXRP22570 491 aa26.74■■□□□ 1.87
SSBP4-202ENST00000348495 ATP5DP30049 168 aa26.74■■□□□ 1.87
SSBP4-202ENST00000348495 CDKN2DP55273 166 aa26.74■■□□□ 1.87
SSBP4-202ENST00000348495 CLDN2P57739 230 aa26.74■■□□□ 1.87
SSBP4-202ENST00000348495 USP10Q14694 798 aaKnown RBP26.74■■□□□ 1.87
SSBP4-202ENST00000348495 RASGEF1AQ8N9B8 481 aa26.74■■□□□ 1.87
SSBP4-202ENST00000348495 NELL1Q92832 810 aa26.74■■□□□ 1.87
SSBP4-202ENST00000348495 C11orf16Q9NQ32 467 aa26.74■■□□□ 1.87
SSBP4-202ENST00000348495 CA5BQ9Y2D0 317 aa26.74■■□□□ 1.87
SSBP4-202ENST00000348495 TPP1O14773 563 aa26.73■■□□□ 1.87
SSBP4-202ENST00000348495 AP2A2O94973 939 aa26.73■■□□□ 1.87
SSBP4-202ENST00000348495 MYCLP1P12525 358 aaPredicted RBP26.73■■□□□ 1.87
SSBP4-202ENST00000348495 SERPINB8P50452 374 aa26.73■■□□□ 1.87
SSBP4-202ENST00000348495 PFN3P60673 137 aa26.73■■□□□ 1.87
SSBP4-202ENST00000348495 CMC1Q7Z7K0 106 aa26.73■■□□□ 1.87
SSBP4-202ENST00000348495 CEP97Q8IW35 865 aa26.73■■□□□ 1.87
SSBP4-202ENST00000348495 KCNJ9Q92806 393 aa26.73■■□□□ 1.87
SSBP4-202ENST00000348495 APOOQ9BUR5 198 aa26.73■■□□□ 1.87
SSBP4-202ENST00000348495 CCDC68Q9H2F9 335 aa26.73■■□□□ 1.87
SSBP4-202ENST00000348495 SNX15Q9NRS6 342 aa26.73■■□□□ 1.87
SSBP4-202ENST00000348495 PHPT1Q9NRX4 125 aaPredicted RBP26.73■■□□□ 1.87
SSBP4-202ENST00000348495 ATXN10Q9UBB4 475 aa26.73■■□□□ 1.87
SSBP4-202ENST00000348495 NOVA2Q9UNW9 492 aaKnown RBP26.73■■□□□ 1.87
SSBP4-202ENST00000348495 H3BMM5 538 aa26.73■■□□□ 1.87
SSBP4-202ENST00000348495 MT-ND3P03897 115 aa26.73■■□□□ 1.87
SSBP4-202ENST00000348495 EXOC3L1Q86VI1 746 aa26.73■■□□□ 1.87
SSBP4-202ENST00000348495 DEFB119Q8N690 84 aa26.73■■□□□ 1.87
SSBP4-202ENST00000348495 DUSP15Q9H1R2 295 aaPredicted RBP26.73■■□□□ 1.87
SSBP4-202ENST00000348495 H0Y8X5 98 aa26.72■■□□□ 1.87
SSBP4-202ENST00000348495 VEGFDO43915 354 aa26.72■■□□□ 1.87
SSBP4-202ENST00000348495 GPR37L1O60883 481 aa26.72■■□□□ 1.87
SSBP4-202ENST00000348495 NIPSNAP2O75323 286 aa26.72■■□□□ 1.87
SSBP4-202ENST00000348495 CD27P26842 260 aa26.72■■□□□ 1.87
SSBP4-202ENST00000348495 PGGT1BP53609 377 aa26.72■■□□□ 1.87
SSBP4-202ENST00000348495 KCTD16Q68DU8 428 aa26.72■■□□□ 1.87
SSBP4-202ENST00000348495 PTRHD1Q6GMV3 140 aaKnown RBP26.72■■□□□ 1.87
SSBP4-202ENST00000348495 ABI3BPQ7Z7G0 1075 aa26.72■■□□□ 1.87
SSBP4-202ENST00000348495 SRRM1Q8IYB3 904 aaKnown RBP26.72■■□□□ 1.87
SSBP4-202ENST00000348495 SGF29Q96ES7 293 aa26.72■■□□□ 1.87
SSBP4-202ENST00000348495 ZCCHC2Q9C0B9 1178 aaKnown RBP26.72■■□□□ 1.87
SSBP4-202ENST00000348495 OR2AG1Q9H205 316 aa26.72■■□□□ 1.87
SSBP4-202ENST00000348495 SENP1Q9P0U3 644 aa26.72■■□□□ 1.87
SSBP4-202ENST00000348495 H3BQF6 201 aa26.71■■□□□ 1.87
SSBP4-202ENST00000348495 MAP3K13O43283 966 aa26.71■■□□□ 1.87
SSBP4-202ENST00000348495 WISP3O95389 354 aaPredicted RBP26.71■■□□□ 1.87
SSBP4-202ENST00000348495 SAT1P21673 171 aa26.71■■□□□ 1.87
SSBP4-202ENST00000348495 TYK2P29597 1187 aa26.71■■□□□ 1.87
SSBP4-202ENST00000348495 CTSCP53634 463 aa26.71■■□□□ 1.87
SSBP4-202ENST00000348495 RAB10P61026 200 aa26.71■■□□□ 1.87
SSBP4-202ENST00000348495 GPS2Q13227 327 aa26.71■■□□□ 1.87
SSBP4-202ENST00000348495 KYAT3Q6YP21 454 aaKnown RBP26.71■■□□□ 1.87
SSBP4-202ENST00000348495 DET1Q7L5Y6 550 aa26.71■■□□□ 1.87
SSBP4-202ENST00000348495 ACMSDQ8TDX5 336 aa26.71■■□□□ 1.87
SSBP4-202ENST00000348495 FOXJ1Q92949 421 aa26.71■■□□□ 1.87
SSBP4-202ENST00000348495 CAMSAP3Q9P1Y5 1249 aaPredicted RBP26.71■■□□□ 1.87
SSBP4-202ENST00000348495 TMEM98Q9Y2Y6 226 aa26.71■■□□□ 1.87
SSBP4-202ENST00000348495 ACTL7BQ9Y614 415 aa26.71■■□□□ 1.87
SSBP4-202ENST00000348495 SLCO1B1Q9Y6L6 691 aa26.71■■□□□ 1.87
SSBP4-202ENST00000348495 PIKFYVEQ9Y2I7 2098 aa26.7■■□□□ 1.87
SSBP4-202ENST00000348495 IQCF5A8MTL0 148 aa26.7■■□□□ 1.87
SSBP4-202ENST00000348495 HMGB1P1B2RPK0 211 aaPredicted RBP26.7■■□□□ 1.87
SSBP4-202ENST00000348495 TOR1BO14657 336 aa26.7■■□□□ 1.87
SSBP4-202ENST00000348495 CDK14O94921 469 aa26.7■■□□□ 1.87
SSBP4-202ENST00000348495 STMN1P16949 149 aa26.7■■□□□ 1.87
SSBP4-202ENST00000348495 KIAA1024LP59773 190 aa26.7■■□□□ 1.87
SSBP4-202ENST00000348495 PDE1CQ14123 709 aaPredicted RBP26.7■■□□□ 1.87
SSBP4-202ENST00000348495 LKAAEAR1Q8TD35 194 aa26.7■■□□□ 1.87
SSBP4-202ENST00000348495 GAB3Q8WWW8 586 aa26.7■■□□□ 1.87
SSBP4-202ENST00000348495 SNX19Q92543 992 aa26.7■■□□□ 1.87
SSBP4-202ENST00000348495 TSPAN17Q96FV3 270 aa26.7■■□□□ 1.87
SSBP4-202ENST00000348495 TAS2R13Q9NYV9 303 aa26.7■■□□□ 1.87
SSBP4-202ENST00000348495 GALPQ9UBC7 116 aa26.7■■□□□ 1.87
SSBP4-202ENST00000348495 KMT2EQ8IZD2 1858 aa26.7■■□□□ 1.87
SSBP4-202ENST00000348495 ABCA7Q8IZY2 2146 aa26.7■■□□□ 1.87
SSBP4-202ENST00000348495 RHOBTB1O94844 696 aa26.7■■□□□ 1.86
SSBP4-202ENST00000348495 OR56A5P0C7T3 313 aa26.7■■□□□ 1.86
SSBP4-202ENST00000348495 ZNF8P17098 575 aaPredicted RBP26.7■■□□□ 1.86
SSBP4-202ENST00000348495 CCNFP41002 786 aa26.7■■□□□ 1.86
SSBP4-202ENST00000348495 MAGOHP61326 146 aaKnown RBP26.7■■□□□ 1.86
SSBP4-202ENST00000348495 HSP90B2PQ58FF3 399 aa26.7■■□□□ 1.86
SSBP4-202ENST00000348495 PIM3Q86V86 326 aa26.7■■□□□ 1.86
SSBP4-202ENST00000348495 KRT222Q8N1A0 295 aa26.7■■□□□ 1.86
SSBP4-202ENST00000348495 HSPA12BQ96MM6 686 aa26.7■■□□□ 1.86
SSBP4-202ENST00000348495 POPDC3Q9HBV1 291 aa26.7■■□□□ 1.86
SSBP4-202ENST00000348495 CEP192Q8TEP8 1941 aa26.7■■□□□ 1.86
SSBP4-202ENST00000348495 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa26.69■■□□□ 1.86
SSBP4-202ENST00000348495 GPR89AB7ZAQ6 455 aa26.69■■□□□ 1.86
SSBP4-202ENST00000348495 CACNB4O00305 520 aaPredicted RBP26.69■■□□□ 1.86
SSBP4-202ENST00000348495 QSOX1O00391 747 aa26.69■■□□□ 1.86
SSBP4-202ENST00000348495 CHUKO15111 745 aa26.69■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms