RNA–Protein interactions for RNA: ENST00000344114.8

HERPUD1-202, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best) BASIC

Gene HERPUD1, Length 1,388 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-202ENST00000344114 KLF11O14901 512 aa13.4□□□□□ -0.26
HERPUD1-202ENST00000344114 FZD6O60353 706 aa13.4□□□□□ -0.26
HERPUD1-202ENST00000344114 GSRP00390 522 aa13.4□□□□□ -0.26
HERPUD1-202ENST00000344114 AHSGP02765 367 aa13.4□□□□□ -0.26
HERPUD1-202ENST00000344114 PABPC1P11940 636 aaKnown RBP13.4□□□□□ -0.26
HERPUD1-202ENST00000344114 OGNP20774 298 aaKnown RBP13.4□□□□□ -0.26
HERPUD1-202ENST00000344114 HLA-FP30511 346 aa13.4□□□□□ -0.26
HERPUD1-202ENST00000344114 CSRP3P50461 194 aa13.4□□□□□ -0.26
HERPUD1-202ENST00000344114 ZNF140P52738 457 aaPredicted RBP13.4□□□□□ -0.26
HERPUD1-202ENST00000344114 RPL26P61254 145 aaKnown RBP13.4□□□□□ -0.26
HERPUD1-202ENST00000344114 MPP1Q00013 466 aa13.4□□□□□ -0.26
HERPUD1-202ENST00000344114 ITIH4Q14624 930 aa13.4□□□□□ -0.26
HERPUD1-202ENST00000344114 GRM3Q14832 879 aa13.4□□□□□ -0.26
HERPUD1-202ENST00000344114 CCDC153Q494R4 210 aa13.4□□□□□ -0.26
HERPUD1-202ENST00000344114 TAF1BQ53T94 588 aaPredicted RBP13.4□□□□□ -0.26
HERPUD1-202ENST00000344114 CCDC157Q569K6 752 aa13.4□□□□□ -0.26
HERPUD1-202ENST00000344114 FOXR1Q6PIV2 292 aa13.4□□□□□ -0.26
HERPUD1-202ENST00000344114 CILP2Q8IUL8 1156 aa13.4□□□□□ -0.26
HERPUD1-202ENST00000344114 DENND6AQ8IWF6 608 aa13.4□□□□□ -0.26
HERPUD1-202ENST00000344114 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.4□□□□□ -0.26
HERPUD1-202ENST00000344114 GPR150Q8NGU9 434 aa13.4□□□□□ -0.26
HERPUD1-202ENST00000344114 ATXN7L3BQ96GX2 97 aa13.4□□□□□ -0.26
HERPUD1-202ENST00000344114 DNAJC1Q96KC8 554 aaKnown RBP13.4□□□□□ -0.26
HERPUD1-202ENST00000344114 PLCD4Q9BRC7 762 aa13.4□□□□□ -0.26
HERPUD1-202ENST00000344114 PITPNM3Q9BZ71 974 aa13.4□□□□□ -0.26
HERPUD1-202ENST00000344114 CEP44Q9C0F1 390 aa13.4□□□□□ -0.26
HERPUD1-202ENST00000344114 MANSC1Q9H8J5 431 aa13.4□□□□□ -0.26
HERPUD1-202ENST00000344114 SGK2Q9HBY8 427 aa13.4□□□□□ -0.26
HERPUD1-202ENST00000344114 NLE1Q9NVX2 485 aaPredicted RBP13.4□□□□□ -0.26
HERPUD1-202ENST00000344114 MID2Q9UJV3 735 aa13.4□□□□□ -0.26
HERPUD1-202ENST00000344114 CORO1CQ9ULV4 474 aaPredicted RBP13.4□□□□□ -0.26
HERPUD1-202ENST00000344114 RPL26L1Q9UNX3 145 aaKnown RBP13.4□□□□□ -0.26
HERPUD1-202ENST00000344114 FLNBO75369 2602 aaKnown RBP13.39□□□□□ -0.27
HERPUD1-202ENST00000344114 KNTC1P50748 2209 aa13.39□□□□□ -0.27
HERPUD1-202ENST00000344114 A0A096LPK6 155 aa13.39□□□□□ -0.27
HERPUD1-202ENST00000344114 FAM95CA0A1B0GW59 222 aa13.39□□□□□ -0.27
HERPUD1-202ENST00000344114 SNX3O60493 162 aa13.39□□□□□ -0.27
HERPUD1-202ENST00000344114 EDF1O60869 148 aaKnown RBP13.39□□□□□ -0.27
HERPUD1-202ENST00000344114 FSBPO95073 299 aa13.39□□□□□ -0.27
HERPUD1-202ENST00000344114 MT-CO1P00395 513 aa13.39□□□□□ -0.27
HERPUD1-202ENST00000344114 IL1BP01584 269 aa13.39□□□□□ -0.27
HERPUD1-202ENST00000344114 PRKCGP05129 697 aa13.39□□□□□ -0.27
HERPUD1-202ENST00000344114 IGHV4-34P06331 123 aa13.39□□□□□ -0.27
HERPUD1-202ENST00000344114 C1SP09871 688 aa13.39□□□□□ -0.27
HERPUD1-202ENST00000344114 CDK4P11802 303 aa13.39□□□□□ -0.27
HERPUD1-202ENST00000344114 SRCP12931 536 aa13.39□□□□□ -0.27
HERPUD1-202ENST00000344114 PLA2G2AP14555 144 aa13.39□□□□□ -0.27
HERPUD1-202ENST00000344114 HNF1BP35680 557 aa13.39□□□□□ -0.27
HERPUD1-202ENST00000344114 LEPRP48357 1165 aaKnown RBP13.39□□□□□ -0.27
HERPUD1-202ENST00000344114 RPS14P62263 151 aaKnown RBP13.39□□□□□ -0.27
HERPUD1-202ENST00000344114 SNRPD1P62314 119 aaKnown RBP13.39□□□□□ -0.27
HERPUD1-202ENST00000344114 RACK1P63244 317 aaKnown RBP13.39□□□□□ -0.27
HERPUD1-202ENST00000344114 POU4F1Q01851 419 aa13.39□□□□□ -0.27
HERPUD1-202ENST00000344114 CTBP1Q13363 440 aa13.39□□□□□ -0.27
HERPUD1-202ENST00000344114 ATXN7L2Q5T6C5 722 aaPredicted RBP13.39□□□□□ -0.27
HERPUD1-202ENST00000344114 ARMC12Q5T9G4 340 aa13.39□□□□□ -0.27
HERPUD1-202ENST00000344114 MRNIPQ6NTE8 343 aa13.39□□□□□ -0.27
HERPUD1-202ENST00000344114 C22orf39Q6P5X5 142 aa13.39□□□□□ -0.27
HERPUD1-202ENST00000344114 AFTPHQ6ULP2 937 aa13.39□□□□□ -0.27
HERPUD1-202ENST00000344114 SPATA21Q7Z572 469 aa13.39□□□□□ -0.27
HERPUD1-202ENST00000344114 CCDC91Q7Z6B0 441 aa13.39□□□□□ -0.27
HERPUD1-202ENST00000344114 KIAA0907Q7Z7F0 614 aaPredicted RBP13.39□□□□□ -0.27
HERPUD1-202ENST00000344114 CMC1Q7Z7K0 106 aa13.39□□□□□ -0.27
HERPUD1-202ENST00000344114 CLEC14AQ86T13 490 aa13.39□□□□□ -0.27
HERPUD1-202ENST00000344114 OTUD6BQ8N6M0 293 aa13.39□□□□□ -0.27
HERPUD1-202ENST00000344114 PCDH20Q8N6Y1 951 aaKnown RBP13.39□□□□□ -0.27
HERPUD1-202ENST00000344114 ZNF366Q8N895 744 aa13.39□□□□□ -0.27
HERPUD1-202ENST00000344114 ARMC2Q8NEN0 867 aa13.39□□□□□ -0.27
HERPUD1-202ENST00000344114 OR2AP1Q8NGE2 309 aa13.39□□□□□ -0.27
HERPUD1-202ENST00000344114 OR6P1Q8NGX9 317 aa13.39□□□□□ -0.27
HERPUD1-202ENST00000344114 WFIKKN2Q8TEU8 576 aa13.39□□□□□ -0.27
HERPUD1-202ENST00000344114 HDAC10Q969S8 669 aa13.39□□□□□ -0.27
HERPUD1-202ENST00000344114 TSNARE1Q96NA8 513 aa13.39□□□□□ -0.27
HERPUD1-202ENST00000344114 ELAC2Q9BQ52 826 aaKnown RBP13.39□□□□□ -0.27
HERPUD1-202ENST00000344114 TM6SF2Q9BZW4 377 aa13.39□□□□□ -0.27
HERPUD1-202ENST00000344114 C12orf65Q9H3J6 166 aaKnown RBP13.39□□□□□ -0.27
HERPUD1-202ENST00000344114 ATP13A3Q9H7F0 1226 aa13.39□□□□□ -0.27
HERPUD1-202ENST00000344114 CAMSAP3Q9P1Y5 1249 aaPredicted RBP13.39□□□□□ -0.27
HERPUD1-202ENST00000344114 SLC39A10Q9ULF5 831 aa13.39□□□□□ -0.27
HERPUD1-202ENST00000344114 PHTF1Q9UMS5 762 aa13.39□□□□□ -0.27
HERPUD1-202ENST00000344114 PCDHGC4Q9Y5F7 938 aa13.39□□□□□ -0.27
HERPUD1-202ENST00000344114 ARL5AQ9Y689 179 aa13.39□□□□□ -0.27
HERPUD1-202ENST00000344114 PTPRQQ9UMZ3 2332 aa13.38□□□□□ -0.27
HERPUD1-202ENST00000344114 VILLO15195 856 aa13.38□□□□□ -0.27
HERPUD1-202ENST00000344114 SMAD6O43541 496 aaKnown RBP13.38□□□□□ -0.27
HERPUD1-202ENST00000344114 PLIN3O60664 434 aa13.38□□□□□ -0.27
HERPUD1-202ENST00000344114 RFPL3O75679 317 aa13.38□□□□□ -0.27
HERPUD1-202ENST00000344114 PGLSO95336 258 aa13.38□□□□□ -0.27
HERPUD1-202ENST00000344114 GOT2P00505 430 aaKnown RBP13.38□□□□□ -0.27
HERPUD1-202ENST00000344114 DNTTP04053 509 aa13.38□□□□□ -0.27
HERPUD1-202ENST00000344114 PROCP04070 461 aa13.38□□□□□ -0.27
HERPUD1-202ENST00000344114 APOA4P06727 396 aa13.38□□□□□ -0.27
HERPUD1-202ENST00000344114 BPGMP07738 259 aa13.38□□□□□ -0.27
HERPUD1-202ENST00000344114 PDHA1P08559 390 aa13.38□□□□□ -0.27
HERPUD1-202ENST00000344114 PIRTP0C851 137 aa13.38□□□□□ -0.27
HERPUD1-202ENST00000344114 NEFHP12036 1026 aa13.38□□□□□ -0.27
HERPUD1-202ENST00000344114 COL6A2P12110 1019 aa13.38□□□□□ -0.27
HERPUD1-202ENST00000344114 JUPP14923 745 aa13.38□□□□□ -0.27
HERPUD1-202ENST00000344114 LPOP22079 712 aaPredicted RBP13.38□□□□□ -0.27
HERPUD1-202ENST00000344114 GABRB3P28472 473 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms