RNA–Protein interactions for RNA: ENST00000343599.5

ZNF540-202, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ZNF540, Length 3,073 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-202ENST00000343599 FBXO8Q9NRD0 319 aa7.29□□□□□ -1.24
ZNF540-202ENST00000343599 SPASTQ9UBP0 616 aa7.29□□□□□ -1.24
ZNF540-202ENST00000343599 MOSPD1Q9UJG1 213 aa7.29□□□□□ -1.24
ZNF540-202ENST00000343599 RBMX2Q9Y388 322 aaKnown RBP7.29□□□□□ -1.24
ZNF540-202ENST00000343599 ACTL7BQ9Y614 415 aa7.29□□□□□ -1.24
ZNF540-202ENST00000343599 ILVBLA1L0T0 632 aa7.29□□□□□ -1.24
ZNF540-202ENST00000343599 M0QYT0 321 aa7.29□□□□□ -1.24
ZNF540-202ENST00000343599 TLR5O60602 858 aa7.29□□□□□ -1.24
ZNF540-202ENST00000343599 EDF1O60869 148 aaKnown RBP7.29□□□□□ -1.24
ZNF540-202ENST00000343599 LRCH4O75427 683 aa7.29□□□□□ -1.24
ZNF540-202ENST00000343599 KLHL2O95198 593 aa7.29□□□□□ -1.24
ZNF540-202ENST00000343599 TNFAIP8O95379 198 aa7.29□□□□□ -1.24
ZNF540-202ENST00000343599 LSM8O95777 96 aaKnown RBP7.29□□□□□ -1.24
ZNF540-202ENST00000343599 KRT6AP02538 564 aa7.29□□□□□ -1.24
ZNF540-202ENST00000343599 KRT6BP04259 564 aa7.29□□□□□ -1.24
ZNF540-202ENST00000343599 CREB1P16220 341 aa7.29□□□□□ -1.24
ZNF540-202ENST00000343599 HNRNPA2B1P22626 353 aaKnown RBP7.29□□□□□ -1.24
ZNF540-202ENST00000343599 ITPKAP23677 461 aa7.29□□□□□ -1.24
ZNF540-202ENST00000343599 IFNA8P32881 189 aa7.29□□□□□ -1.24
ZNF540-202ENST00000343599 GRIK1P39086 918 aa7.29□□□□□ -1.24
ZNF540-202ENST00000343599 TNFSF9P41273 254 aa7.29□□□□□ -1.24
ZNF540-202ENST00000343599 AQP4P55087 323 aa7.29□□□□□ -1.24
ZNF540-202ENST00000343599 IL9RQ01113 521 aa7.29□□□□□ -1.24
ZNF540-202ENST00000343599 MTM1Q13496 603 aa7.29□□□□□ -1.24
ZNF540-202ENST00000343599 PPP2R5EQ16537 467 aa7.29□□□□□ -1.24
ZNF540-202ENST00000343599 KYNUQ16719 465 aa7.29□□□□□ -1.24
ZNF540-202ENST00000343599 CCDC58Q4VC31 144 aa7.29□□□□□ -1.24
ZNF540-202ENST00000343599 FAM91A1Q658Y4 838 aa7.29□□□□□ -1.24
ZNF540-202ENST00000343599 NANOGP8Q6NSW7 305 aa7.29□□□□□ -1.24
ZNF540-202ENST00000343599 PEX26Q7Z412 305 aa7.29□□□□□ -1.24
ZNF540-202ENST00000343599 DHDDSQ86SQ9 333 aa7.29□□□□□ -1.24
ZNF540-202ENST00000343599 KCNE4Q8WWG9 221 aa7.29□□□□□ -1.24
ZNF540-202ENST00000343599 OR8D1Q8WZ84 308 aa7.29□□□□□ -1.24
ZNF540-202ENST00000343599 NTAN1Q96AB6 310 aa7.29□□□□□ -1.24
ZNF540-202ENST00000343599 VMP1Q96GC9 406 aa7.29□□□□□ -1.24
ZNF540-202ENST00000343599 B3GALT6Q96L58 329 aa7.29□□□□□ -1.24
ZNF540-202ENST00000343599 HSPA12BQ96MM6 686 aa7.29□□□□□ -1.24
ZNF540-202ENST00000343599 HAUS8Q9BT25 410 aa7.29□□□□□ -1.24
ZNF540-202ENST00000343599 TDRD1Q9BXT4 1180 aaKnown RBP7.29□□□□□ -1.24
ZNF540-202ENST00000343599 RBCK1Q9BYM8 510 aa7.29□□□□□ -1.24
ZNF540-202ENST00000343599 MLXIPLQ9NP71 852 aa7.29□□□□□ -1.24
ZNF540-202ENST00000343599 TMEM74BQ9NUR3 256 aa7.29□□□□□ -1.24
ZNF540-202ENST00000343599 PCSK1NQ9UHG2 260 aa7.29□□□□□ -1.24
ZNF540-202ENST00000343599 PACSIN2Q9UNF0 486 aaPredicted RBP7.29□□□□□ -1.24
ZNF540-202ENST00000343599 ZNF891A8MT65 544 aaPredicted RBP7.28□□□□□ -1.24
ZNF540-202ENST00000343599 LMO7DNF2Z398 122 aa7.28□□□□□ -1.24
ZNF540-202ENST00000343599 ZNF701M0R085 212 aaPredicted RBP7.28□□□□□ -1.24
ZNF540-202ENST00000343599 SNX2O60749 519 aa7.28□□□□□ -1.24
ZNF540-202ENST00000343599 GIMD1P0DJR0 217 aa7.28□□□□□ -1.24
ZNF540-202ENST00000343599 KELP23276 732 aa7.28□□□□□ -1.24
ZNF540-202ENST00000343599 POLR2FP61218 127 aaKnown RBP7.28□□□□□ -1.24
ZNF540-202ENST00000343599 RPS21P63220 83 aaKnown RBP7.28□□□□□ -1.24
ZNF540-202ENST00000343599 ABHD18Q0P651 414 aa7.28□□□□□ -1.24
ZNF540-202ENST00000343599 HGSNATQ68CP4 663 aa7.28□□□□□ -1.24
ZNF540-202ENST00000343599 KCNK18Q7Z418 384 aa7.28□□□□□ -1.24
ZNF540-202ENST00000343599 HEATR4Q86WZ0 1026 aa7.28□□□□□ -1.24
ZNF540-202ENST00000343599 RELL1Q8IUW5 271 aa7.28□□□□□ -1.24
ZNF540-202ENST00000343599 DPH2Q9BQC3 489 aaPredicted RBP7.28□□□□□ -1.24
ZNF540-202ENST00000343599 UQCC2Q9BRT2 126 aa7.28□□□□□ -1.24
ZNF540-202ENST00000343599 FANCEQ9HB96 536 aa7.28□□□□□ -1.24
ZNF540-202ENST00000343599 ARL8BQ9NVJ2 186 aa7.28□□□□□ -1.24
ZNF540-202ENST00000343599 DNAJC17Q9NVM6 304 aaKnown RBP7.28□□□□□ -1.24
ZNF540-202ENST00000343599 ABI2Q9NYB9 513 aaPredicted RBP7.28□□□□□ -1.24
ZNF540-202ENST00000343599 TAS2R1Q9NYW7 299 aa7.28□□□□□ -1.24
ZNF540-202ENST00000343599 HACD3Q9P035 362 aa7.28□□□□□ -1.24
ZNF540-202ENST00000343599 AGO1Q9UL18 857 aaKnown RBP7.28□□□□□ -1.24
ZNF540-202ENST00000343599 SIK3Q9Y2K2 1263 aa7.28□□□□□ -1.24
ZNF540-202ENST00000343599 PRKAB1Q9Y478 270 aa7.28□□□□□ -1.24
ZNF540-202ENST00000343599 HEMK1Q9Y5R4 338 aaPredicted RBP7.28□□□□□ -1.24
ZNF540-202ENST00000343599 KLF2Q9Y5W3 355 aaPredicted RBP7.28□□□□□ -1.24
ZNF540-202ENST00000343599 A0A1B0GVM2 712 aa7.28□□□□□ -1.24
ZNF540-202ENST00000343599 TCAF2A6NFQ2 919 aa7.28□□□□□ -1.24
ZNF540-202ENST00000343599 CASQ2O14958 399 aaPredicted RBP7.28□□□□□ -1.24
ZNF540-202ENST00000343599 CLOCKO15516 846 aa7.28□□□□□ -1.24
ZNF540-202ENST00000343599 DAB1O75553 588 aa7.28□□□□□ -1.24
ZNF540-202ENST00000343599 PIAS2O75928 621 aa7.28□□□□□ -1.24
ZNF540-202ENST00000343599 ZBTB11O95625 1053 aaPredicted RBP7.28□□□□□ -1.24
ZNF540-202ENST00000343599 CYP2F1P24903 491 aa7.28□□□□□ -1.24
ZNF540-202ENST00000343599 SOX11P35716 441 aa7.28□□□□□ -1.24
ZNF540-202ENST00000343599 SLC1A1P43005 524 aa7.28□□□□□ -1.24
ZNF540-202ENST00000343599 MTIF2P46199 727 aaKnown RBP7.28□□□□□ -1.24
ZNF540-202ENST00000343599 SLCO1A2P46721 670 aa7.28□□□□□ -1.24
ZNF540-202ENST00000343599 ZXDBP98169 803 aa7.28□□□□□ -1.24
ZNF540-202ENST00000343599 CST6Q15828 149 aa7.28□□□□□ -1.24
ZNF540-202ENST00000343599 UBAP2Q5T6F2 1119 aaKnown RBP7.28□□□□□ -1.24
ZNF540-202ENST00000343599 WDR74Q6RFH5 385 aaPredicted RBP7.28□□□□□ -1.24
ZNF540-202ENST00000343599 RIPOR1Q6ZS17 1223 aa7.28□□□□□ -1.24
ZNF540-202ENST00000343599 HORMAD1Q86X24 394 aa7.28□□□□□ -1.24
ZNF540-202ENST00000343599 CBARPQ8N350 705 aaPredicted RBP7.28□□□□□ -1.24
ZNF540-202ENST00000343599 LRRC57Q8N9N7 239 aa7.28□□□□□ -1.24
ZNF540-202ENST00000343599 LRRC15Q8TF66 581 aa7.28□□□□□ -1.24
ZNF540-202ENST00000343599 SH3KBP1Q96B97 665 aa7.28□□□□□ -1.24
ZNF540-202ENST00000343599 RUNDC3BQ96NL0 473 aa7.28□□□□□ -1.24
ZNF540-202ENST00000343599 PANX3Q96QZ0 392 aa7.28□□□□□ -1.24
ZNF540-202ENST00000343599 EDEM3Q9BZQ6 932 aa7.28□□□□□ -1.24
ZNF540-202ENST00000343599 RUBCNLQ9H714 662 aa7.28□□□□□ -1.24
ZNF540-202ENST00000343599 C10orf88Q9H8K7 445 aa7.28□□□□□ -1.24
ZNF540-202ENST00000343599 GOLGA2P5Q9HBQ8 144 aa7.28□□□□□ -1.24
ZNF540-202ENST00000343599 MOV10Q9HCE1 1003 aaKnown RBP7.28□□□□□ -1.24
ZNF540-202ENST00000343599 NDFIP2Q9NV92 336 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms