RNA–Protein interactions for RNA: ENST00000341307.6

RTN3-203, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 2,524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-203ENST00000341307 MAN2B2Q9Y2E5 1009 aa11.77□□□□□ -0.53
RTN3-203ENST00000341307 PCDHB12Q9Y5F1 795 aa11.77□□□□□ -0.53
RTN3-203ENST00000341307 C3orf70A6NLC5 250 aaPredicted RBP11.77□□□□□ -0.53
RTN3-203ENST00000341307 TOR1AO14656 332 aa11.77□□□□□ -0.53
RTN3-203ENST00000341307 INMTO95050 263 aa11.77□□□□□ -0.53
RTN3-203ENST00000341307 RBP1P09455 135 aa11.77□□□□□ -0.53
RTN3-203ENST00000341307 C7P10643 843 aa11.77□□□□□ -0.53
RTN3-203ENST00000341307 HOXB1P14653 301 aaPredicted RBP11.77□□□□□ -0.53
RTN3-203ENST00000341307 CDKN2BP42772 138 aa11.77□□□□□ -0.53
RTN3-203ENST00000341307 ABCG1P45844 678 aa11.77□□□□□ -0.53
RTN3-203ENST00000341307 LSM3P62310 102 aaKnown RBP11.77□□□□□ -0.53
RTN3-203ENST00000341307 CDC42EP1Q00587 391 aa11.77□□□□□ -0.53
RTN3-203ENST00000341307 TAP1Q03518 808 aa11.77□□□□□ -0.53
RTN3-203ENST00000341307 PIGFQ07326 219 aa11.77□□□□□ -0.53
RTN3-203ENST00000341307 MGAT3Q09327 533 aa11.77□□□□□ -0.53
RTN3-203ENST00000341307 LCLAT1Q6UWP7 414 aa11.77□□□□□ -0.53
RTN3-203ENST00000341307 UNC45BQ8IWX7 931 aa11.77□□□□□ -0.53
RTN3-203ENST00000341307 SVOPQ8N4V2 548 aa11.77□□□□□ -0.53
RTN3-203ENST00000341307 OR4M2Q8NGB6 313 aa11.77□□□□□ -0.53
RTN3-203ENST00000341307 HSFY1Q96LI6 401 aa11.77□□□□□ -0.53
RTN3-203ENST00000341307 IER2Q9BTL4 223 aa11.77□□□□□ -0.53
RTN3-203ENST00000341307 NTN4Q9HB63 628 aa11.77□□□□□ -0.53
RTN3-203ENST00000341307 ZBTB26Q9HCK0 441 aa11.77□□□□□ -0.53
RTN3-203ENST00000341307 GMPR2Q9P2T1 348 aaKnown RBP11.77□□□□□ -0.53
RTN3-203ENST00000341307 CDY2AQ9Y6F7 541 aa11.77□□□□□ -0.53
RTN3-203ENST00000341307 CDY1Q9Y6F8 540 aa11.77□□□□□ -0.53
RTN3-203ENST00000341307 SLC22A2O15244 555 aa11.76□□□□□ -0.53
RTN3-203ENST00000341307 CPNE3O75131 537 aaKnown RBP11.76□□□□□ -0.53
RTN3-203ENST00000341307 STAU1O95793 577 aaKnown RBP11.76□□□□□ -0.53
RTN3-203ENST00000341307 YES1P07947 543 aa11.76□□□□□ -0.53
RTN3-203ENST00000341307 PSKH1P11801 424 aa11.76□□□□□ -0.53
RTN3-203ENST00000341307 CCL5P13501 91 aa11.76□□□□□ -0.53
RTN3-203ENST00000341307 ATP6V1B2P21281 511 aa11.76□□□□□ -0.53
RTN3-203ENST00000341307 CRHBPP24387 322 aa11.76□□□□□ -0.53
RTN3-203ENST00000341307 ADORA2BP29275 332 aa11.76□□□□□ -0.53
RTN3-203ENST00000341307 IL12AP29459 219 aa11.76□□□□□ -0.53
RTN3-203ENST00000341307 MIPP30301 263 aa11.76□□□□□ -0.53
RTN3-203ENST00000341307 KRT20P35900 424 aa11.76□□□□□ -0.53
RTN3-203ENST00000341307 VBP1P61758 197 aa11.76□□□□□ -0.53
RTN3-203ENST00000341307 COX10Q12887 443 aa11.76□□□□□ -0.53
RTN3-203ENST00000341307 TAF12Q16514 161 aa11.76□□□□□ -0.53
RTN3-203ENST00000341307 TYSND1Q2T9J0 566 aa11.76□□□□□ -0.53
RTN3-203ENST00000341307 LEXMQ3ZCV2 418 aa11.76□□□□□ -0.53
RTN3-203ENST00000341307 TFDP3Q5H9I0 405 aa11.76□□□□□ -0.53
RTN3-203ENST00000341307 FBXO47Q5MNV8 452 aa11.76□□□□□ -0.53
RTN3-203ENST00000341307 GDF6Q6KF10 455 aaPredicted RBP11.76□□□□□ -0.53
RTN3-203ENST00000341307 NAPRTQ6XQN6 538 aa11.76□□□□□ -0.53
RTN3-203ENST00000341307 R3HCC1LQ7Z5L2 792 aaKnown RBP11.76□□□□□ -0.53
RTN3-203ENST00000341307 SLAIN1Q8ND83 568 aa11.76□□□□□ -0.53
RTN3-203ENST00000341307 CLEC4CQ8WTT0 213 aa11.76□□□□□ -0.53
RTN3-203ENST00000341307 SLC22A17Q8WUG5 538 aa11.76□□□□□ -0.53
RTN3-203ENST00000341307 PROX1Q92786 737 aa11.76□□□□□ -0.53
RTN3-203ENST00000341307 MCRS1Q96EZ8 462 aa11.76□□□□□ -0.53
RTN3-203ENST00000341307 MUS81Q96NY9 551 aa11.76□□□□□ -0.53
RTN3-203ENST00000341307 PEBP4Q96S96 227 aa11.76□□□□□ -0.53
RTN3-203ENST00000341307 KATNAL1Q9BW62 490 aa11.76□□□□□ -0.53
RTN3-203ENST00000341307 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP11.76□□□□□ -0.533e-6■□□□□ 8.9
RTN3-203ENST00000341307 TLR9Q9NR96 1032 aa11.76□□□□□ -0.53
RTN3-203ENST00000341307 CD300AQ9UGN4 299 aa11.76□□□□□ -0.53
RTN3-203ENST00000341307 RIMKLBQ9ULI2 386 aa11.76□□□□□ -0.53
RTN3-203ENST00000341307 HEATR9A2RTY3 570 aa11.76□□□□□ -0.53
RTN3-203ENST00000341307 C16orf96A6NNT2 1141 aa11.76□□□□□ -0.53
RTN3-203ENST00000341307 KPNA7A9QM74 516 aa11.76□□□□□ -0.53
RTN3-203ENST00000341307 PAHP00439 452 aa11.76□□□□□ -0.53
RTN3-203ENST00000341307 PDGFAP04085 211 aa11.76□□□□□ -0.53
RTN3-203ENST00000341307 CRYBB1P53674 252 aaPredicted RBP11.76□□□□□ -0.53
RTN3-203ENST00000341307 MFSD13AQ14CX5 517 aa11.76□□□□□ -0.53
RTN3-203ENST00000341307 TBRG1Q3YBR2 411 aa11.76□□□□□ -0.53
RTN3-203ENST00000341307 COLEC12Q5KU26 742 aa11.76□□□□□ -0.53
RTN3-203ENST00000341307 LRRC38Q5VT99 294 aa11.76□□□□□ -0.53
RTN3-203ENST00000341307 TMEM65Q6PI78 240 aa11.76□□□□□ -0.53
RTN3-203ENST00000341307 TIFABQ6ZNK6 161 aa11.76□□□□□ -0.53
RTN3-203ENST00000341307 CNTD1Q8N815 330 aa11.76□□□□□ -0.53
RTN3-203ENST00000341307 OR7D4Q8NG98 312 aa11.76□□□□□ -0.53
RTN3-203ENST00000341307 ACTL9Q8TC94 416 aa11.76□□□□□ -0.53
RTN3-203ENST00000341307 NXNL1Q96CM4 212 aa11.76□□□□□ -0.53
RTN3-203ENST00000341307 CEP19Q96LK0 163 aa11.76□□□□□ -0.53
RTN3-203ENST00000341307 TRIM15Q9C019 465 aa11.76□□□□□ -0.53
RTN3-203ENST00000341307 POPDC2Q9HBU9 364 aa11.76□□□□□ -0.53
RTN3-203ENST00000341307 CCM2LQ9NUG4 571 aaPredicted RBP11.76□□□□□ -0.53
RTN3-203ENST00000341307 SYBUQ9NX95 663 aa11.76□□□□□ -0.53
RTN3-203ENST00000341307 GLTPQ9NZD2 209 aa11.76□□□□□ -0.53
RTN3-203ENST00000341307 UBQLN1Q9UMX0 589 aaKnown RBP11.76□□□□□ -0.53
RTN3-203ENST00000341307 DERAQ9Y315 318 aa11.76□□□□□ -0.53
RTN3-203ENST00000341307 SAGE2PA6NJ88 616 aa11.75□□□□□ -0.53
RTN3-203ENST00000341307 PIRO00625 290 aa11.75□□□□□ -0.53
RTN3-203ENST00000341307 DUSP11O75319 330 aaKnown RBP11.75□□□□□ -0.53
RTN3-203ENST00000341307 PRKD3O94806 890 aa11.75□□□□□ -0.53
RTN3-203ENST00000341307 CDK14O94921 469 aa11.75□□□□□ -0.53
RTN3-203ENST00000341307 MAP3K6O95382 1288 aa11.75□□□□□ -0.53
RTN3-203ENST00000341307 JUNP05412 331 aaKnown RBP11.75□□□□□ -0.53
RTN3-203ENST00000341307 CYBAP13498 195 aa11.75□□□□□ -0.53
RTN3-203ENST00000341307 EN2P19622 333 aaPredicted RBP11.75□□□□□ -0.53
RTN3-203ENST00000341307 GMPRP36959 345 aa11.75□□□□□ -0.53
RTN3-203ENST00000341307 ARPP19P56211 112 aa11.75□□□□□ -0.53
RTN3-203ENST00000341307 YWHAZP63104 245 aaKnown RBP11.75□□□□□ -0.53
RTN3-203ENST00000341307 LAPTM5Q13571 262 aa11.75□□□□□ -0.53
RTN3-203ENST00000341307 SKIV2LQ15477 1246 aaKnown RBP11.75□□□□□ -0.53
RTN3-203ENST00000341307 TRMT10BQ6PF06 316 aaKnown RBP11.75□□□□□ -0.53
RTN3-203ENST00000341307 CMTR2Q8IYT2 770 aaKnown RBP11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms