RNA–Protein interactions for RNA: ENST00000337299.6

COL2A1-201, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL2A1, Length 4,257 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-201ENST00000337299 C6orf141Q5SZD1 244 aa13.15□□□□□ -0.3
COL2A1-201ENST00000337299 ERICH5Q6P6B1 374 aa13.15□□□□□ -0.3
COL2A1-201ENST00000337299 SH3YL1Q96HL8 342 aaPredicted RBP13.15□□□□□ -0.3
COL2A1-201ENST00000337299 ACO2Q99798 780 aaKnown RBP13.15□□□□□ -0.3
COL2A1-201ENST00000337299 ACAT2Q9BWD1 397 aa13.15□□□□□ -0.3
COL2A1-201ENST00000337299 YTHDF1Q9BYJ9 559 aaKnown RBP13.15□□□□□ -0.3
COL2A1-201ENST00000337299 CCM2LQ9NUG4 571 aaPredicted RBP13.15□□□□□ -0.3
COL2A1-201ENST00000337299 OLAHQ9NV23 265 aa13.15□□□□□ -0.3
COL2A1-201ENST00000337299 ERAP1Q9NZ08 941 aa13.15□□□□□ -0.3
COL2A1-201ENST00000337299 H2AFY2Q9P0M6 372 aaPredicted RBP13.15□□□□□ -0.3
COL2A1-201ENST00000337299 CPA4Q9UI42 421 aa13.15□□□□□ -0.3
COL2A1-201ENST00000337299 PTGDR2Q9Y5Y4 395 aa13.15□□□□□ -0.3
COL2A1-201ENST00000337299 CRYZL1O95825 349 aa13.14□□□□□ -0.31
COL2A1-201ENST00000337299 SLC25A27O95847 323 aa13.14□□□□□ -0.31
COL2A1-201ENST00000337299 CYBBP04839 570 aa13.14□□□□□ -0.31
COL2A1-201ENST00000337299 CCNYL3P0C7X3 344 aa13.14□□□□□ -0.31
COL2A1-201ENST00000337299 CTSKP43235 329 aa13.14□□□□□ -0.31
COL2A1-201ENST00000337299 SLC9A3P48764 834 aa13.14□□□□□ -0.31
COL2A1-201ENST00000337299 BNC1Q01954 994 aa13.14□□□□□ -0.31
COL2A1-201ENST00000337299 VSIG10LQ86VR7 867 aa13.14□□□□□ -0.31
COL2A1-201ENST00000337299 AMIGO1Q86WK6 493 aa13.14□□□□□ -0.31
COL2A1-201ENST00000337299 RIOX2Q8IUF8 465 aa13.14□□□□□ -0.31
COL2A1-201ENST00000337299 CHPT1Q8WUD6 406 aa13.14□□□□□ -0.31
COL2A1-201ENST00000337299 ACDQ96AP0 544 aa13.14□□□□□ -0.31
COL2A1-201ENST00000337299 NACC2Q96BF6 587 aa13.14□□□□□ -0.31
COL2A1-201ENST00000337299 PIWIL1Q96J94 861 aaKnown RBP13.14□□□□□ -0.31
COL2A1-201ENST00000337299 KCNA7Q96RP8 456 aa13.14□□□□□ -0.31
COL2A1-201ENST00000337299 A8MT66 165 aa13.14□□□□□ -0.31
COL2A1-201ENST00000337299 SSNA1O43805 119 aa13.14□□□□□ -0.31
COL2A1-201ENST00000337299 HBP1O60381 514 aa13.14□□□□□ -0.31
COL2A1-201ENST00000337299 NPHS1O60500 1241 aa13.14□□□□□ -0.31
COL2A1-201ENST00000337299 CD4P01730 458 aa13.14□□□□□ -0.31
COL2A1-201ENST00000337299 AHSGP02765 367 aa13.14□□□□□ -0.31
COL2A1-201ENST00000337299 PSKH1P11801 424 aa13.14□□□□□ -0.31
COL2A1-201ENST00000337299 GLDCP23378 1020 aa13.14□□□□□ -0.31
COL2A1-201ENST00000337299 CRY1Q16526 586 aa13.14□□□□□ -0.31
COL2A1-201ENST00000337299 PTPRNQ16849 979 aa13.14□□□□□ -0.31
COL2A1-201ENST00000337299 CASP12Q6UXS9 341 aa13.14□□□□□ -0.31
COL2A1-201ENST00000337299 ZDHHC17Q8IUH5 632 aa13.14□□□□□ -0.31
COL2A1-201ENST00000337299 C1GALT1C1Q96EU7 318 aa13.14□□□□□ -0.31
COL2A1-201ENST00000337299 TEX12Q9BXU0 123 aa13.14□□□□□ -0.31
COL2A1-201ENST00000337299 PAK1IP1Q9NWT1 392 aaPredicted RBP13.14□□□□□ -0.31
COL2A1-201ENST00000337299 LOC100130705A0A1B0GUX0 176 aa13.14□□□□□ -0.31
COL2A1-201ENST00000337299 GNG14A0A1W2PPG7 69 aa13.14□□□□□ -0.31
COL2A1-201ENST00000337299 UGT2B11O75310 529 aa13.14□□□□□ -0.31
COL2A1-201ENST00000337299 MATN1P21941 496 aa13.14□□□□□ -0.31
COL2A1-201ENST00000337299 WNT3AP56704 352 aa13.14□□□□□ -0.31
COL2A1-201ENST00000337299 CD300CQ08708 224 aa13.14□□□□□ -0.31
COL2A1-201ENST00000337299 SMARCB1Q12824 385 aa13.14□□□□□ -0.31
COL2A1-201ENST00000337299 SV2CQ496J9 727 aa13.14□□□□□ -0.31
COL2A1-201ENST00000337299 PQLC3Q8N755 202 aa13.14□□□□□ -0.31
COL2A1-201ENST00000337299 C1orf127Q8N9H9 656 aa13.14□□□□□ -0.31
COL2A1-201ENST00000337299 TXNDC5Q8NBS9 432 aaKnown RBP13.14□□□□□ -0.31
COL2A1-201ENST00000337299 TMCO6Q96DC7 493 aa13.14□□□□□ -0.31
COL2A1-201ENST00000337299 SLC38A7Q9NVC3 462 aa13.14□□□□□ -0.31
COL2A1-201ENST00000337299 MPP6Q9NZW5 540 aa13.14□□□□□ -0.31
COL2A1-201ENST00000337299 ERVK-18Q9QC07 812 aa13.14□□□□□ -0.31
COL2A1-201ENST00000337299 SNED1Q8TER0 1413 aa13.14□□□□□ -0.31
COL2A1-201ENST00000337299 CNTRLQ7Z7A1 2325 aa13.14□□□□□ -0.31
COL2A1-201ENST00000337299 DHX15O43143 795 aaKnown RBP13.13□□□□□ -0.31
COL2A1-201ENST00000337299 LYPLA2O95372 231 aa13.13□□□□□ -0.31
COL2A1-201ENST00000337299 ZBTB48P10074 688 aaPredicted RBP13.13□□□□□ -0.31
COL2A1-201ENST00000337299 MYF6P23409 242 aa13.13□□□□□ -0.31
COL2A1-201ENST00000337299 SLC1A2P43004 574 aa13.13□□□□□ -0.31
COL2A1-201ENST00000337299 ALDH3A2P51648 485 aa13.13□□□□□ -0.31
COL2A1-201ENST00000337299 DGKEP52429 567 aa13.13□□□□□ -0.31
COL2A1-201ENST00000337299 ELP6Q0PNE2 266 aa13.13□□□□□ -0.31
COL2A1-201ENST00000337299 TUBA3CQ13748 450 aa13.13□□□□□ -0.31
COL2A1-201ENST00000337299 CPSF6Q16630 551 aaKnown RBP eCLIP13.13□□□□□ -0.31
COL2A1-201ENST00000337299 KYAT1Q16773 422 aa13.13□□□□□ -0.31
COL2A1-201ENST00000337299 KIAA1841Q6NSI8 718 aa13.13□□□□□ -0.31
COL2A1-201ENST00000337299 RASSF5Q8WWW0 418 aa13.13□□□□□ -0.31
COL2A1-201ENST00000337299 PIK3R3Q92569 461 aa13.13□□□□□ -0.31
COL2A1-201ENST00000337299 TFAP2CQ92754 450 aa13.13□□□□□ -0.31
COL2A1-201ENST00000337299 LGALS12Q96DT0 336 aa13.13□□□□□ -0.31
COL2A1-201ENST00000337299 KLHL5Q96PQ7 755 aa13.13□□□□□ -0.31
COL2A1-201ENST00000337299 UBQLN1Q9UMX0 589 aaKnown RBP13.13□□□□□ -0.31
COL2A1-201ENST00000337299 KCPQ6ZWJ8 1503 aa13.13□□□□□ -0.31
COL2A1-201ENST00000337299 PRSS51A0A1B0GVH4 220 aa13.13□□□□□ -0.31
COL2A1-201ENST00000337299 C2orf81A6NN90 581 aa13.13□□□□□ -0.31
COL2A1-201ENST00000337299 C9IYK1 514 aa13.13□□□□□ -0.31
COL2A1-201ENST00000337299 CILPO75339 1184 aa13.13□□□□□ -0.31
COL2A1-201ENST00000337299 EFNA1P20827 205 aaPredicted RBP13.13□□□□□ -0.31
COL2A1-201ENST00000337299 PTPN3P26045 913 aa13.13□□□□□ -0.31
COL2A1-201ENST00000337299 DIO3P55073 304 aa13.13□□□□□ -0.31
COL2A1-201ENST00000337299 GJA9P57773 515 aa13.13□□□□□ -0.31
COL2A1-201ENST00000337299 FAM187BQ17R55 369 aa13.13□□□□□ -0.31
COL2A1-201ENST00000337299 CELF3Q5SZQ8 465 aaKnown RBP13.13□□□□□ -0.31
COL2A1-201ENST00000337299 FKBP1CQ5VVH2 108 aa13.13□□□□□ -0.31
COL2A1-201ENST00000337299 THEM5Q8N1Q8 247 aa13.13□□□□□ -0.31
COL2A1-201ENST00000337299 NLGN2Q8NFZ4 835 aa13.13□□□□□ -0.31
COL2A1-201ENST00000337299 HASPINQ8TF76 798 aa13.13□□□□□ -0.31
COL2A1-201ENST00000337299 NMRK2Q9NPI5 230 aa13.13□□□□□ -0.31
COL2A1-201ENST00000337299 ERVK13-1Q9NX77 482 aa13.13□□□□□ -0.31
COL2A1-201ENST00000337299 SNX7Q9UNH6 387 aa13.13□□□□□ -0.31
COL2A1-201ENST00000337299 PCDHGA7Q9Y5G6 932 aa13.13□□□□□ -0.31
COL2A1-201ENST00000337299 RGPD2P0DJD1 1756 aa13.13□□□□□ -0.31
COL2A1-201ENST00000337299 PMM2O15305 246 aa13.13□□□□□ -0.31
COL2A1-201ENST00000337299 JUNP05412 331 aaKnown RBP13.13□□□□□ -0.31
COL2A1-201ENST00000337299 MATKP42679 507 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms