RNA–Protein interactions for RNA: ENST00000336873.9

HPS4-201, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HPS4, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-201ENST00000336873 PRKG2Q13237 762 aa8.16□□□□□ -1.1
HPS4-201ENST00000336873 MSLNQ13421 630 aaPredicted RBP8.16□□□□□ -1.1
HPS4-201ENST00000336873 LPIN1Q14693 890 aa8.16□□□□□ -1.1
HPS4-201ENST00000336873 SF1Q15637 639 aaKnown RBP8.16□□□□□ -1.1
HPS4-201ENST00000336873 BRMS1LQ5PSV4 323 aa8.16□□□□□ -1.1
HPS4-201ENST00000336873 HECTD3Q5T447 861 aa8.16□□□□□ -1.1
HPS4-201ENST00000336873 C1QTNF12Q5T7M4 302 aa8.16□□□□□ -1.1
HPS4-201ENST00000336873 SLC24A5Q71RS6 500 aa8.16□□□□□ -1.1
HPS4-201ENST00000336873 ZDHHC13Q8IUH4 622 aa8.16□□□□□ -1.1
HPS4-201ENST00000336873 SPPL2AQ8TCT8 520 aa8.16□□□□□ -1.1
HPS4-201ENST00000336873 GATA6Q92908 595 aa8.16□□□□□ -1.1
HPS4-201ENST00000336873 SH3KBP1Q96B97 665 aa8.16□□□□□ -1.1
HPS4-201ENST00000336873 NRBF2Q96F24 287 aa8.16□□□□□ -1.1
HPS4-201ENST00000336873 MTERF1Q99551 399 aaKnown RBP8.16□□□□□ -1.1
HPS4-201ENST00000336873 YIPF2Q9BWQ6 316 aa8.16□□□□□ -1.1
HPS4-201ENST00000336873 POLR3BQ9NW08 1133 aaPredicted RBP8.16□□□□□ -1.1
HPS4-201ENST00000336873 CNOT6Q9ULM6 557 aaKnown RBP8.16□□□□□ -1.1
HPS4-201ENST00000336873 ARID1AO14497 2285 aa8.16□□□□□ -1.1
HPS4-201ENST00000336873 HTTP42858 3142 aa8.16□□□□□ -1.1
HPS4-201ENST00000336873 A0A1B0GTL3 188 aa8.16□□□□□ -1.1
HPS4-201ENST00000336873 TCAF2A6NFQ2 919 aa8.16□□□□□ -1.1
HPS4-201ENST00000336873 FFAR2O15552 330 aa8.16□□□□□ -1.1
HPS4-201ENST00000336873 AOC2O75106 756 aa8.16□□□□□ -1.1
HPS4-201ENST00000336873 ULK1O75385 1050 aa8.16□□□□□ -1.1
HPS4-201ENST00000336873 FTH1P02794 183 aa8.16□□□□□ -1.1
HPS4-201ENST00000336873 UGT2B4P06133 528 aa8.16□□□□□ -1.1
HPS4-201ENST00000336873 ARHGDIAP52565 204 aa8.16□□□□□ -1.1
HPS4-201ENST00000336873 CCDC85BQ15834 202 aaPredicted RBP8.16□□□□□ -1.1
HPS4-201ENST00000336873 CRY1Q16526 586 aa8.16□□□□□ -1.1
HPS4-201ENST00000336873 MYLK3Q32MK0 819 aa8.16□□□□□ -1.1
HPS4-201ENST00000336873 ANKS3Q6ZW76 656 aa8.16□□□□□ -1.1
HPS4-201ENST00000336873 LYSMD3Q7Z3D4 306 aa8.16□□□□□ -1.1
HPS4-201ENST00000336873 ARHGAP12Q8IWW6 846 aa8.16□□□□□ -1.1
HPS4-201ENST00000336873 CPSF7Q8N684 471 aaKnown RBP8.16□□□□□ -1.1
HPS4-201ENST00000336873 KCTD13Q8WZ19 329 aa8.16□□□□□ -1.1
HPS4-201ENST00000336873 FAR2Q96K12 515 aa8.16□□□□□ -1.1
HPS4-201ENST00000336873 SLC2A13Q96QE2 648 aa8.16□□□□□ -1.1
HPS4-201ENST00000336873 SGIP1Q9BQI5 828 aa8.16□□□□□ -1.1
HPS4-201ENST00000336873 OSBPL2Q9H1P3 480 aa8.16□□□□□ -1.1
HPS4-201ENST00000336873 OPTCQ9UBM4 332 aa8.16□□□□□ -1.1
HPS4-201ENST00000336873 BLOC1S6Q9UL45 172 aa8.16□□□□□ -1.1
HPS4-201ENST00000336873 SNX8Q9Y5X2 465 aa8.16□□□□□ -1.1
HPS4-201ENST00000336873 MYO15AQ9UKN7 3530 aa8.16□□□□□ -1.1
HPS4-201ENST00000336873 ZNF831Q5JPB2 1677 aa8.15□□□□□ -1.1
HPS4-201ENST00000336873 hCG_2039718K7EN88 272 aa8.15□□□□□ -1.1
HPS4-201ENST00000336873 SAP18O00422 153 aaKnown RBP8.15□□□□□ -1.1
HPS4-201ENST00000336873 PLOD2O00469 737 aa8.15□□□□□ -1.1
HPS4-201ENST00000336873 MUSKO15146 869 aa8.15□□□□□ -1.1
HPS4-201ENST00000336873 TRMUO75648 421 aaKnown RBP8.15□□□□□ -1.1
HPS4-201ENST00000336873 CYP4F8P98187 520 aa8.15□□□□□ -1.1
HPS4-201ENST00000336873 BCL2L1Q07817 233 aa8.15□□□□□ -1.1
HPS4-201ENST00000336873 ACAP2Q15057 778 aa8.15□□□□□ -1.1
HPS4-201ENST00000336873 TBC1D25Q3MII6 688 aa8.15□□□□□ -1.1
HPS4-201ENST00000336873 ANKRD26P1Q6NSI1 321 aa8.15□□□□□ -1.1
HPS4-201ENST00000336873 FUT10Q6P4F1 479 aa8.15□□□□□ -1.1
HPS4-201ENST00000336873 PIANPQ8IYJ0 282 aa8.15□□□□□ -1.1
HPS4-201ENST00000336873 LSMEM2Q8N112 164 aa8.15□□□□□ -1.1
HPS4-201ENST00000336873 ZNF555Q8NEP9 628 aa8.15□□□□□ -1.1
HPS4-201ENST00000336873 OR2T34Q8NGX1 318 aa8.15□□□□□ -1.1
HPS4-201ENST00000336873 OR2T3Q8NH03 318 aa8.15□□□□□ -1.1
HPS4-201ENST00000336873 PLEKHG4BQ96PX9 1271 aa8.15□□□□□ -1.1
HPS4-201ENST00000336873 CHID1Q9BWS9 393 aa8.15□□□□□ -1.1
HPS4-201ENST00000336873 STN1Q9H668 368 aaKnown RBP8.15□□□□□ -1.1
HPS4-201ENST00000336873 SMURF2Q9HAU4 748 aa8.15□□□□□ -1.1
HPS4-201ENST00000336873 DNMT3LQ9UJW3 386 aa8.15□□□□□ -1.1
HPS4-201ENST00000336873 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP8.15□□□□□ -1.1
HPS4-201ENST00000336873 CDC14AQ9UNH5 594 aa8.15□□□□□ -1.1
HPS4-201ENST00000336873 RBMX2Q9Y388 322 aaKnown RBP8.15□□□□□ -1.1
HPS4-201ENST00000336873 CACNA1IQ9P0X4 2223 aa8.15□□□□□ -1.1
HPS4-201ENST00000336873 M0R3G1 203 aa8.15□□□□□ -1.1
HPS4-201ENST00000336873 SOCS2O14508 198 aa8.15□□□□□ -1.1
HPS4-201ENST00000336873 TBC1D4O60343 1298 aa8.15□□□□□ -1.1
HPS4-201ENST00000336873 RPP40O75818 363 aaKnown RBP8.15□□□□□ -1.1
HPS4-201ENST00000336873 RSL1D1O76021 490 aaKnown RBP8.15□□□□□ -1.1
HPS4-201ENST00000336873 CLDN7O95471 211 aa8.15□□□□□ -1.1
HPS4-201ENST00000336873 SNAP29O95721 258 aa8.15□□□□□ -1.1
HPS4-201ENST00000336873 ALDH1A1P00352 501 aa8.15□□□□□ -1.1
HPS4-201ENST00000336873 GSRP00390 522 aa8.15□□□□□ -1.1
HPS4-201ENST00000336873 CYBBP04839 570 aa8.15□□□□□ -1.1
HPS4-201ENST00000336873 G6PDP11413 515 aa8.15□□□□□ -1.1
HPS4-201ENST00000336873 IL7RP16871 459 aa8.15□□□□□ -1.1
HPS4-201ENST00000336873 RHOQP17081 205 aa8.15□□□□□ -1.1
HPS4-201ENST00000336873 ITGALP20701 1170 aa8.15□□□□□ -1.1
HPS4-201ENST00000336873 OXTRP30559 389 aa8.15□□□□□ -1.1
HPS4-201ENST00000336873 ALDH9A1P49189 494 aa8.15□□□□□ -1.1
HPS4-201ENST00000336873 HTR6P50406 440 aa8.15□□□□□ -1.1
HPS4-201ENST00000336873 BNIP3Q12983 259 aa8.15□□□□□ -1.1
HPS4-201ENST00000336873 KIAA0930Q6ICG6 404 aaPredicted RBP8.15□□□□□ -1.1
HPS4-201ENST00000336873 DOK6Q6PKX4 331 aa8.15□□□□□ -1.1
HPS4-201ENST00000336873 CHSY3Q70JA7 882 aa8.15□□□□□ -1.1
HPS4-201ENST00000336873 ISCA2Q86U28 154 aa8.15□□□□□ -1.1
HPS4-201ENST00000336873 RNF175Q8N4F7 328 aa8.15□□□□□ -1.1
HPS4-201ENST00000336873 RDH11Q8TC12 318 aa8.15□□□□□ -1.1
HPS4-201ENST00000336873 ZNF419Q96HQ0 510 aaPredicted RBP8.15□□□□□ -1.1
HPS4-201ENST00000336873 OR52E6Q96RD3 313 aa8.15□□□□□ -1.1
HPS4-201ENST00000336873 CORO1BQ9BR76 489 aa8.15□□□□□ -1.1
HPS4-201ENST00000336873 BOCQ9BWV1 1114 aa8.15□□□□□ -1.1
HPS4-201ENST00000336873 TRIM54Q9BYV2 358 aa8.15□□□□□ -1.1
HPS4-201ENST00000336873 LTB4R2Q9NPC1 389 aa8.15□□□□□ -1.1
HPS4-201ENST00000336873 DNAAF2Q9NVR5 837 aaKnown RBP8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms