RNA–Protein interactions for RNA: ENST00000330374.6

VMA21-201, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VMA21, Length 4,717 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-201ENST00000330374 GJB3O75712 270 aa7.82□□□□□ -1.16
VMA21-201ENST00000330374 SEC14L2O76054 403 aa7.82□□□□□ -1.16
VMA21-201ENST00000330374 STAU1O95793 577 aaKnown RBP7.82□□□□□ -1.16
VMA21-201ENST00000330374 TCEA1P23193 301 aaKnown RBP7.82□□□□□ -1.16
VMA21-201ENST00000330374 MAP2K4P45985 399 aa7.82□□□□□ -1.16
VMA21-201ENST00000330374 DGKQP52824 942 aa7.82□□□□□ -1.16
VMA21-201ENST00000330374 LILRA4P59901 499 aa7.82□□□□□ -1.16
VMA21-201ENST00000330374 HERVK_113P63132 956 aa7.82□□□□□ -1.16
VMA21-201ENST00000330374 ZNF846Q147U1 533 aa7.82□□□□□ -1.16
VMA21-201ENST00000330374 HACD2Q6Y1H2 254 aa7.82□□□□□ -1.16
VMA21-201ENST00000330374 SLC22A16Q86VW1 577 aa7.82□□□□□ -1.16
VMA21-201ENST00000330374 CNIH3Q8TBE1 160 aa7.82□□□□□ -1.16
VMA21-201ENST00000330374 DPF3Q92784 378 aa7.82□□□□□ -1.16
VMA21-201ENST00000330374 MRGPRX2Q96LB1 330 aa7.82□□□□□ -1.16
VMA21-201ENST00000330374 TBATAQ96M53 351 aa7.82□□□□□ -1.16
VMA21-201ENST00000330374 ERVK-6Q9BXR3 956 aa7.82□□□□□ -1.16
VMA21-201ENST00000330374 SPATA7Q9P0W8 599 aa7.82□□□□□ -1.16
VMA21-201ENST00000330374 ABCD2Q9UBJ2 740 aa7.82□□□□□ -1.16
VMA21-201ENST00000330374 GPN3Q9UHW5 284 aaPredicted RBP7.82□□□□□ -1.16
VMA21-201ENST00000330374 ATP11BQ9Y2G3 1177 aa7.82□□□□□ -1.16
VMA21-201ENST00000330374 GIT1Q9Y2X7 761 aa7.82□□□□□ -1.16
VMA21-201ENST00000330374 PCDHA9Q9Y5H5 950 aa7.82□□□□□ -1.16
VMA21-201ENST00000330374 H0Y858 1186 aa7.82□□□□□ -1.16
VMA21-201ENST00000330374 GSTA4O15217 222 aa7.82□□□□□ -1.16
VMA21-201ENST00000330374 PABPC1P11940 636 aaKnown RBP7.82□□□□□ -1.16
VMA21-201ENST00000330374 HRH2P25021 359 aa7.82□□□□□ -1.16
VMA21-201ENST00000330374 ADCYAP1R1P41586 468 aa7.82□□□□□ -1.16
VMA21-201ENST00000330374 AGTR2P50052 363 aa7.82□□□□□ -1.16
VMA21-201ENST00000330374 GEMP55040 296 aa7.82□□□□□ -1.16
VMA21-201ENST00000330374 TRIM32Q13049 653 aa7.82□□□□□ -1.16
VMA21-201ENST00000330374 SEMA3BQ13214 749 aa7.82□□□□□ -1.16
VMA21-201ENST00000330374 SF3B4Q15427 424 aaKnown RBP eCLIP7.82□□□□□ -1.166e-7■■■■■ 30.8
VMA21-201ENST00000330374 INAVAQ3KP66 663 aa7.82□□□□□ -1.16
VMA21-201ENST00000330374 BLOC1S3Q6QNY0 202 aa7.82□□□□□ -1.16
VMA21-201ENST00000330374 RNF19BQ6ZMZ0 732 aa7.82□□□□□ -1.16
VMA21-201ENST00000330374 ZDHHC13Q8IUH4 622 aa7.82□□□□□ -1.16
VMA21-201ENST00000330374 FNDC5Q8NAU1 212 aa7.82□□□□□ -1.16
VMA21-201ENST00000330374 OR7A2PQ8NGA2 310 aa7.82□□□□□ -1.16
VMA21-201ENST00000330374 NT5C3BQ969T7 300 aa7.82□□□□□ -1.16
VMA21-201ENST00000330374 TBRG4Q969Z0 631 aaKnown RBP eCLIP7.82□□□□□ -1.16
VMA21-201ENST00000330374 TSPAN17Q96FV3 270 aa7.82□□□□□ -1.16
VMA21-201ENST00000330374 ZNF347Q96SE7 839 aa7.82□□□□□ -1.16
VMA21-201ENST00000330374 SMOQ99835 787 aa7.82□□□□□ -1.16
VMA21-201ENST00000330374 TMEM9Q9P0T7 183 aa7.82□□□□□ -1.16
VMA21-201ENST00000330374 PDE10AQ9Y233 779 aa7.82□□□□□ -1.16
VMA21-201ENST00000330374 RLFQ13129 1914 aa7.82□□□□□ -1.16
VMA21-201ENST00000330374 ASPDHA6ND91 283 aa7.82□□□□□ -1.16
VMA21-201ENST00000330374 TBC1D4O60343 1298 aa7.82□□□□□ -1.16
VMA21-201ENST00000330374 CD53P19397 219 aa7.82□□□□□ -1.16
VMA21-201ENST00000330374 CRHBPP24387 322 aa7.82□□□□□ -1.16
VMA21-201ENST00000330374 PSMB9P28065 219 aa7.82□□□□□ -1.16
VMA21-201ENST00000330374 IL5RAQ01344 420 aa7.82□□□□□ -1.16
VMA21-201ENST00000330374 DAG1Q14118 895 aa7.82□□□□□ -1.16
VMA21-201ENST00000330374 VGLL4Q14135 290 aa7.82□□□□□ -1.16
VMA21-201ENST00000330374 TCEA2Q15560 299 aa7.82□□□□□ -1.16
VMA21-201ENST00000330374 GRIK4Q16099 956 aa7.82□□□□□ -1.16
VMA21-201ENST00000330374 KYAT1Q16773 422 aa7.82□□□□□ -1.16
VMA21-201ENST00000330374 CNTN4Q8IWV2 1026 aa7.82□□□□□ -1.16
VMA21-201ENST00000330374 CLIP4Q8N3C7 705 aa7.82□□□□□ -1.16
VMA21-201ENST00000330374 ZNF560Q96MR9 790 aa7.82□□□□□ -1.16
VMA21-201ENST00000330374 SLC2A13Q96QE2 648 aa7.82□□□□□ -1.16
VMA21-201ENST00000330374 C17orf80Q9BSJ5 609 aa7.82□□□□□ -1.16
VMA21-201ENST00000330374 NDEL1Q9GZM8 345 aa7.82□□□□□ -1.16
VMA21-201ENST00000330374 TLR9Q9NR96 1032 aa7.82□□□□□ -1.16
VMA21-201ENST00000330374 TCRBV5S2A0A599 114 aa7.81□□□□□ -1.16
VMA21-201ENST00000330374 AP3B1O00203 1094 aa7.81□□□□□ -1.16
VMA21-201ENST00000330374 DEAF1O75398 565 aaPredicted RBP7.81□□□□□ -1.16
VMA21-201ENST00000330374 FMO3P31513 532 aa7.81□□□□□ -1.16
VMA21-201ENST00000330374 SLC26A2P50443 739 aa7.81□□□□□ -1.16
VMA21-201ENST00000330374 CLCN5P51795 746 aa7.81□□□□□ -1.16
VMA21-201ENST00000330374 CHRNB3Q05901 458 aa7.81□□□□□ -1.16
VMA21-201ENST00000330374 OXA1LQ15070 435 aa7.81□□□□□ -1.16
VMA21-201ENST00000330374 MAPRE1Q15691 268 aaKnown RBP7.81□□□□□ -1.16
VMA21-201ENST00000330374 CTU2Q2VPK5 515 aaKnown RBP7.81□□□□□ -1.16
VMA21-201ENST00000330374 ENPP6Q6UWR7 440 aa7.81□□□□□ -1.16
VMA21-201ENST00000330374 LGI2Q8N0V4 545 aa7.81□□□□□ -1.16
VMA21-201ENST00000330374 SCAIQ8N9R8 606 aa7.81□□□□□ -1.16
VMA21-201ENST00000330374 ZNF555Q8NEP9 628 aa7.81□□□□□ -1.16
VMA21-201ENST00000330374 TRPM4Q8TD43 1214 aa7.81□□□□□ -1.16
VMA21-201ENST00000330374 FRS2Q8WU20 508 aa7.81□□□□□ -1.16
VMA21-201ENST00000330374 NCLNQ969V3 563 aa7.81□□□□□ -1.16
VMA21-201ENST00000330374 PCED1BQ96HM7 432 aa7.81□□□□□ -1.16
VMA21-201ENST00000330374 ALOXE3Q9BYJ1 711 aa7.81□□□□□ -1.16
VMA21-201ENST00000330374 ELP3Q9H9T3 547 aa7.81□□□□□ -1.16
VMA21-201ENST00000330374 CRTAC1Q9NQ79 661 aa7.81□□□□□ -1.16
VMA21-201ENST00000330374 HPS4Q9NQG7 708 aa7.81□□□□□ -1.16
VMA21-201ENST00000330374 TREX1Q9NSU2 369 aa7.81□□□□□ -1.16
VMA21-201ENST00000330374 G3V2T6 193 aa7.81□□□□□ -1.16
VMA21-201ENST00000330374 HAX1O00165 279 aa7.81□□□□□ -1.16
VMA21-201ENST00000330374 CPNE6O95741 557 aa7.81□□□□□ -1.16
VMA21-201ENST00000330374 CYBBP04839 570 aa7.81□□□□□ -1.16
VMA21-201ENST00000330374 NR4A2P43354 598 aa7.81□□□□□ -1.16
VMA21-201ENST00000330374 GSSP48637 474 aa7.81□□□□□ -1.16
VMA21-201ENST00000330374 DSC2Q02487 901 aa7.81□□□□□ -1.16
VMA21-201ENST00000330374 CD47Q08722 323 aa7.81□□□□□ -1.16
VMA21-201ENST00000330374 FSCN1Q16658 493 aaKnown RBP7.81□□□□□ -1.16
VMA21-201ENST00000330374 KIAA0930Q6ICG6 404 aaPredicted RBP7.81□□□□□ -1.16
VMA21-201ENST00000330374 DTWD1Q8N5C7 304 aa7.81□□□□□ -1.16
VMA21-201ENST00000330374 CDYL2Q8N8U2 506 aa7.81□□□□□ -1.16
VMA21-201ENST00000330374 THUMPD3Q9BV44 507 aaKnown RBP7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms