RNA–Protein interactions for RNA: ENST00000330137.11

SKA2-201, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SKA2, Length 2,798 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-201ENST00000330137 KCNAB2Q13303 367 aa8.32□□□□□ -1.08
SKA2-201ENST00000330137 RCAN2Q14206 197 aa8.32□□□□□ -1.08
SKA2-201ENST00000330137 SLC14A2Q15849 920 aa8.32□□□□□ -1.08
SKA2-201ENST00000330137 KIF19Q2TAC6 998 aa8.32□□□□□ -1.08
SKA2-201ENST00000330137 TECRLQ5HYJ1 363 aa8.32□□□□□ -1.08
SKA2-201ENST00000330137 KIAA0319Q5VV43 1072 aa8.32□□□□□ -1.08
SKA2-201ENST00000330137 SULT1C3Q6IMI6 304 aa8.32□□□□□ -1.08
SKA2-201ENST00000330137 DENND5AQ6IQ26 1287 aa8.32□□□□□ -1.08
SKA2-201ENST00000330137 CAPN13Q6MZZ7 669 aaPredicted RBP8.32□□□□□ -1.08
SKA2-201ENST00000330137 TRNP1Q6NT89 227 aa8.32□□□□□ -1.08
SKA2-201ENST00000330137 TRAF7Q6Q0C0 670 aa8.32□□□□□ -1.08
SKA2-201ENST00000330137 LCLAT1Q6UWP7 414 aa8.32□□□□□ -1.08
SKA2-201ENST00000330137 GALNT7Q86SF2 657 aa8.32□□□□□ -1.08
SKA2-201ENST00000330137 CCDC190Q86UF4 302 aa8.32□□□□□ -1.08
SKA2-201ENST00000330137 ADHFE1Q8IWW8 467 aa8.32□□□□□ -1.08
SKA2-201ENST00000330137 DPP10Q8N608 796 aa8.32□□□□□ -1.08
SKA2-201ENST00000330137 GABPB2Q8TAK5 448 aaPredicted RBP8.32□□□□□ -1.08
SKA2-201ENST00000330137 HSFY1Q96LI6 401 aa8.32□□□□□ -1.08
SKA2-201ENST00000330137 VAT1Q99536 393 aa8.32□□□□□ -1.08
SKA2-201ENST00000330137 GABARAPL1Q9H0R8 117 aa8.32□□□□□ -1.08
SKA2-201ENST00000330137 PORCNQ9H237 461 aa8.32□□□□□ -1.08
SKA2-201ENST00000330137 RNF181Q9P0P0 153 aa8.32□□□□□ -1.08
SKA2-201ENST00000330137 MOSPD1Q9UJG1 213 aa8.32□□□□□ -1.08
SKA2-201ENST00000330137 TRHDEQ9UKU6 1024 aa8.32□□□□□ -1.08
SKA2-201ENST00000330137 ZBTB21Q9ULJ3 1066 aa8.32□□□□□ -1.08
SKA2-201ENST00000330137 VPS4AQ9UN37 437 aa8.32□□□□□ -1.08
SKA2-201ENST00000330137 HES2Q9Y543 173 aa8.32□□□□□ -1.08
SKA2-201ENST00000330137 LINC00862A6NCI5 91 aa8.31□□□□□ -1.08
SKA2-201ENST00000330137 NR5A2O00482 541 aa8.31□□□□□ -1.08
SKA2-201ENST00000330137 RGS10O43665 173 aa8.31□□□□□ -1.08
SKA2-201ENST00000330137 CILPO75339 1184 aa8.31□□□□□ -1.08
SKA2-201ENST00000330137 ITGBL1O95965 494 aaPredicted RBP8.31□□□□□ -1.08
SKA2-201ENST00000330137 GOT2P00505 430 aaKnown RBP8.31□□□□□ -1.08
SKA2-201ENST00000330137 ICAM1P05362 532 aa8.31□□□□□ -1.08
SKA2-201ENST00000330137 ANXA6P08133 673 aa8.31□□□□□ -1.08
SKA2-201ENST00000330137 ALDOCP09972 364 aaKnown RBP8.31□□□□□ -1.08
SKA2-201ENST00000330137 CYP2C8P10632 490 aa8.31□□□□□ -1.08
SKA2-201ENST00000330137 LBPP18428 481 aa8.31□□□□□ -1.08
SKA2-201ENST00000330137 TALDO1P37837 337 aa8.31□□□□□ -1.08
SKA2-201ENST00000330137 ARL4AP40617 200 aa8.31□□□□□ -1.08
SKA2-201ENST00000330137 MTHFRP42898 656 aa8.31□□□□□ -1.08
SKA2-201ENST00000330137 SLC9A3P48764 834 aa8.31□□□□□ -1.08
SKA2-201ENST00000330137 NCS1P62166 190 aa8.31□□□□□ -1.08
SKA2-201ENST00000330137 SLC6A3Q01959 620 aa8.31□□□□□ -1.08
SKA2-201ENST00000330137 ACAP2Q15057 778 aa8.31□□□□□ -1.08
SKA2-201ENST00000330137 PAFAH1B3Q15102 231 aaKnown RBP8.31□□□□□ -1.08
SKA2-201ENST00000330137 AAK1Q2M2I8 961 aa8.31□□□□□ -1.08
SKA2-201ENST00000330137 ZIK1Q3SY52 487 aaPredicted RBP8.31□□□□□ -1.08
SKA2-201ENST00000330137 UGT3A2Q3SY77 523 aa8.31□□□□□ -1.08
SKA2-201ENST00000330137 GPAT3Q53EU6 434 aa8.31□□□□□ -1.08
SKA2-201ENST00000330137 PITRM1Q5JRX3 1037 aa8.31□□□□□ -1.08
SKA2-201ENST00000330137 COLEC12Q5KU26 742 aa8.31□□□□□ -1.08
SKA2-201ENST00000330137 VARS2Q5ST30 1063 aaKnown RBP8.31□□□□□ -1.08
SKA2-201ENST00000330137 CES5AQ6NT32 575 aa8.31□□□□□ -1.08
SKA2-201ENST00000330137 PDZD4Q76G19 769 aaPredicted RBP8.31□□□□□ -1.08
SKA2-201ENST00000330137 EFL1Q7Z2Z2 1120 aaKnown RBP8.31□□□□□ -1.08
SKA2-201ENST00000330137 UBE2Q1Q7Z7E8 422 aa8.31□□□□□ -1.08
SKA2-201ENST00000330137 FAM35AQ86V20 835 aa8.31□□□□□ -1.08
SKA2-201ENST00000330137 CDAN1Q8IWY9 1227 aa8.31□□□□□ -1.08
SKA2-201ENST00000330137 CADM2Q8N3J6 435 aa8.31□□□□□ -1.08
SKA2-201ENST00000330137 DNERQ8NFT8 737 aa8.31□□□□□ -1.08
SKA2-201ENST00000330137 SLC7A6Q92536 515 aa8.31□□□□□ -1.08
SKA2-201ENST00000330137 ISG20Q96AZ6 181 aaKnown RBP8.31□□□□□ -1.08
SKA2-201ENST00000330137 P2RY11Q96G91 374 aa8.31□□□□□ -1.08
SKA2-201ENST00000330137 TMEM80Q96HE8 168 aa8.31□□□□□ -1.08
SKA2-201ENST00000330137 SPATA17Q96L03 361 aa8.31□□□□□ -1.08
SKA2-201ENST00000330137 SIGLEC11Q96RL6 698 aa8.31□□□□□ -1.08
SKA2-201ENST00000330137 ACAT2Q9BWD1 397 aa8.31□□□□□ -1.08
SKA2-201ENST00000330137 MRPL39Q9NYK5 338 aaKnown RBP8.31□□□□□ -1.08
SKA2-201ENST00000330137 SEPT10Q9P0V9 454 aa8.31□□□□□ -1.08
SKA2-201ENST00000330137 EIF3KQ9UBQ5 218 aaKnown RBP8.31□□□□□ -1.08
SKA2-201ENST00000330137 SNX7Q9UNH6 387 aa8.31□□□□□ -1.08
SKA2-201ENST00000330137 M0QYV0 167 aa8.31□□□□□ -1.08
SKA2-201ENST00000330137 ARHGAP33O14559 1287 aa8.31□□□□□ -1.08
SKA2-201ENST00000330137 CTDSP2O14595 271 aa8.31□□□□□ -1.08
SKA2-201ENST00000330137 LRIG2O94898 1065 aa8.31□□□□□ -1.08
SKA2-201ENST00000330137 ALPPP05187 535 aa8.31□□□□□ -1.08
SKA2-201ENST00000330137 SERPINF2P08697 491 aa8.31□□□□□ -1.08
SKA2-201ENST00000330137 CD36P16671 472 aa8.31□□□□□ -1.08
SKA2-201ENST00000330137 ALOX12P18054 663 aa8.31□□□□□ -1.08
SKA2-201ENST00000330137 HRH2P25021 359 aa8.31□□□□□ -1.08
SKA2-201ENST00000330137 PSMB4P28070 264 aa8.31□□□□□ -1.08
SKA2-201ENST00000330137 SOX6P35712 828 aa8.31□□□□□ -1.08
SKA2-201ENST00000330137 ARL2P36404 184 aa8.31□□□□□ -1.08
SKA2-201ENST00000330137 CLK1P49759 484 aaKnown RBP8.31□□□□□ -1.08
SKA2-201ENST00000330137 EFNA5P52803 228 aa8.31□□□□□ -1.08
SKA2-201ENST00000330137 KCNK10P57789 538 aa8.31□□□□□ -1.08
SKA2-201ENST00000330137 POU5F1BQ06416 359 aa8.31□□□□□ -1.08
SKA2-201ENST00000330137 NFYCQ13952 458 aa8.31□□□□□ -1.08
SKA2-201ENST00000330137 PPP1R3AQ16821 1122 aa8.31□□□□□ -1.08
SKA2-201ENST00000330137 TBRG1Q3YBR2 411 aa8.31□□□□□ -1.08
SKA2-201ENST00000330137 XKR3Q5GH77 459 aa8.31□□□□□ -1.08
SKA2-201ENST00000330137 ZNF667Q5HYK9 610 aa8.31□□□□□ -1.08
SKA2-201ENST00000330137 INTS6LQ5JSJ4 861 aaKnown RBP8.31□□□□□ -1.08
SKA2-201ENST00000330137 SH3PXD2AQ5TCZ1 1133 aa8.31□□□□□ -1.08
SKA2-201ENST00000330137 GLYATQ6IB77 296 aa8.31□□□□□ -1.08
SKA2-201ENST00000330137 OR6B2Q6IFH4 312 aa8.31□□□□□ -1.08
SKA2-201ENST00000330137 SCYL2Q6P3W7 929 aa8.31□□□□□ -1.08
SKA2-201ENST00000330137 FAM183BPQ6ZVS7 135 aa8.31□□□□□ -1.08
SKA2-201ENST00000330137 SPATC1Q76KD6 591 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms