RNA–Protein interactions for RNA: ENST00000324771.12

DDR1-223, Transcript of discoidin domain receptor tyrosine kinase 1, human

APPRIS ALT2 TSL 5 BASIC

Gene DDR1, Length 4,148 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDR1-223	ENST00000324771	ILVBL	A1L0T0	632 aa		11.72	□□□□□ -0.53
DDR1-223	ENST00000324771	GRM6	O15303	877 aa		11.72	□□□□□ -0.53
DDR1-223	ENST00000324771	PRAMEF11	O60813	436 aa		11.72	□□□□□ -0.53
DDR1-223	ENST00000324771	STC2	O76061	302 aa		11.72	□□□□□ -0.53
DDR1-223	ENST00000324771	SLC35E2B	P0CK96	405 aa		11.72	□□□□□ -0.53
DDR1-223	ENST00000324771	DGKQ	P52824	942 aa		11.72	□□□□□ -0.53
DDR1-223	ENST00000324771	CACNG1	Q06432	222 aa		11.72	□□□□□ -0.53
DDR1-223	ENST00000324771	TEAD2	Q15562	447 aa		11.72	□□□□□ -0.53
DDR1-223	ENST00000324771	ARSI	Q5FYB1	569 aa		11.72	□□□□□ -0.53
DDR1-223	ENST00000324771	ARHGAP22	Q7Z5H3	698 aa		11.72	□□□□□ -0.53
DDR1-223	ENST00000324771	TRIM74	Q86UV6	250 aa		11.72	□□□□□ -0.53
DDR1-223	ENST00000324771	TRIM73	Q86UV7	250 aa		11.72	□□□□□ -0.53
DDR1-223	ENST00000324771	OR10Q1	Q8NGQ4	319 aa		11.72	□□□□□ -0.53
DDR1-223	ENST00000324771	TMEM174	Q8WUU8	243 aa		11.72	□□□□□ -0.53
DDR1-223	ENST00000324771	NSUN3	Q9H649	340 aa	Known RBP	11.72	□□□□□ -0.53
DDR1-223	ENST00000324771	IMP3	Q9NV31	184 aa	Known RBP	11.72	□□□□□ -0.53
DDR1-223	ENST00000324771	COMMD8	Q9NX08	183 aa		11.72	□□□□□ -0.53
DDR1-223	ENST00000324771	DNAJC28	Q9NX36	388 aa		11.72	□□□□□ -0.53
DDR1-223	ENST00000324771	PDP2	Q9P2J9	529 aa		11.72	□□□□□ -0.53
DDR1-223	ENST00000324771	LEF1	Q9UJU2	399 aa	Predicted RBP	11.72	□□□□□ -0.53
DDR1-223	ENST00000324771	DHRS12	A0PJE2	317 aa		11.71	□□□□□ -0.53
DDR1-223	ENST00000324771	TPD52L2	O43399	206 aa	Known RBP	11.71	□□□□□ -0.53
DDR1-223	ENST00000324771	IFNA8	P32881	189 aa		11.71	□□□□□ -0.53
DDR1-223	ENST00000324771	HTR7	P34969	479 aa		11.71	□□□□□ -0.53
DDR1-223	ENST00000324771	CRAT	P43155	626 aa		11.71	□□□□□ -0.53
DDR1-223	ENST00000324771	MAPK9	P45984	424 aa		11.71	□□□□□ -0.53
DDR1-223	ENST00000324771	C2orf27A	Q580R0	203 aa		11.71	□□□□□ -0.53
DDR1-223	ENST00000324771	CGB2	Q6NT52	195 aa		11.71	□□□□□ -0.53
DDR1-223	ENST00000324771	TMPRSS11B	Q86T26	416 aa		11.71	□□□□□ -0.53
DDR1-223	ENST00000324771	RAVER1	Q8IY67	606 aa	Known RBP	11.71	□□□□□ -0.53
DDR1-223	ENST00000324771	KLHL23	Q8NBE8	558 aa		11.71	□□□□□ -0.53
DDR1-223	ENST00000324771	CXorf40A	Q8TE69	158 aa		11.71	□□□□□ -0.53
DDR1-223	ENST00000324771	PANX1	Q96RD7	426 aa		11.71	□□□□□ -0.53
DDR1-223	ENST00000324771	TRMO	Q9BU70	441 aa		11.71	□□□□□ -0.53
DDR1-223	ENST00000324771	KATNBL1	Q9H079	304 aa		11.71	□□□□□ -0.53
DDR1-223	ENST00000324771	ALG2	Q9H553	416 aa		11.71	□□□□□ -0.53
DDR1-223	ENST00000324771	ARMC7	Q9H6L4	198 aa		11.71	□□□□□ -0.53
DDR1-223	ENST00000324771	AKTIP	Q9H8T0	292 aa		11.71	□□□□□ -0.53
DDR1-223	ENST00000324771	TMEM248	Q9NWD8	314 aa		11.71	□□□□□ -0.53
DDR1-223	ENST00000324771	ANAPC2	Q9UJX6	822 aa		11.71	□□□□□ -0.53
DDR1-223	ENST00000324771	PRKAB1	Q9Y478	270 aa		11.71	□□□□□ -0.53
DDR1-223	ENST00000324771	CFAP20	Q9Y6A4	193 aa	Known RBP	11.71	□□□□□ -0.53
DDR1-223	ENST00000324771	SLC9A3R1	O14745	358 aa	Predicted RBP	11.71	□□□□□ -0.53
DDR1-223	ENST00000324771	DEAF1	O75398	565 aa	Predicted RBP	11.71	□□□□□ -0.53
DDR1-223	ENST00000324771	OAZ2	O95190	189 aa		11.71	□□□□□ -0.53
DDR1-223	ENST00000324771	EIF2S1	P05198	315 aa	Known RBP	11.71	□□□□□ -0.53
DDR1-223	ENST00000324771	CKMT2	P17540	419 aa		11.71	□□□□□ -0.53
DDR1-223	ENST00000324771	MTPN	P58546	118 aa		11.71	□□□□□ -0.53
DDR1-223	ENST00000324771	FOLH1	Q04609	750 aa		11.71	□□□□□ -0.53
DDR1-223	ENST00000324771	PDK3	Q15120	406 aa		11.71	□□□□□ -0.53
DDR1-223	ENST00000324771	TAF1A	Q15573	450 aa	Predicted RBP	11.71	□□□□□ -0.53
DDR1-223	ENST00000324771	C6orf52	Q5T4I8	152 aa		11.71	□□□□□ -0.53
DDR1-223	ENST00000324771	FAM171B	Q6P995	826 aa		11.71	□□□□□ -0.53
DDR1-223	ENST00000324771	SUPV3L1	Q8IYB8	786 aa	Known RBP eCLIP	11.71	□□□□□ -0.53
DDR1-223	ENST00000324771	MICU2	Q8IYU8	434 aa		11.71	□□□□□ -0.53
DDR1-223	ENST00000324771	ZBTB2	Q8N680	514 aa		11.71	□□□□□ -0.53
DDR1-223	ENST00000324771	LINC01465	Q8N7H1	131 aa		11.71	□□□□□ -0.53
DDR1-223	ENST00000324771	MAPK15	Q8TD08	544 aa		11.71	□□□□□ -0.53
DDR1-223	ENST00000324771	PLD4	Q96BZ4	506 aa		11.71	□□□□□ -0.53
DDR1-223	ENST00000324771	ZNF556	Q9HAH1	456 aa		11.71	□□□□□ -0.53
DDR1-223	ENST00000324771	SLC28A3	Q9HAS3	691 aa		11.71	□□□□□ -0.53
DDR1-223	ENST00000324771	COL5A3	P25940	1745 aa	Predicted RBP	11.71	□□□□□ -0.53
DDR1-223	ENST00000324771	TNKS1BP1	Q9C0C2	1729 aa	Known RBP	11.71	□□□□□ -0.53
DDR1-223	ENST00000324771	FAM163B	P0C2L3	166 aa		11.71	□□□□□ -0.54
DDR1-223	ENST00000324771	ACADM	P11310	421 aa		11.71	□□□□□ -0.54
DDR1-223	ENST00000324771	ATP6V1C1	P21283	382 aa		11.71	□□□□□ -0.54
DDR1-223	ENST00000324771	PSMD8	P48556	350 aa		11.71	□□□□□ -0.54
DDR1-223	ENST00000324771	SEC13	P55735	322 aa		11.71	□□□□□ -0.54
DDR1-223	ENST00000324771	DEFB103A	P81534	67 aa		11.71	□□□□□ -0.54
DDR1-223	ENST00000324771	RIPK1	Q13546	671 aa		11.71	□□□□□ -0.54
DDR1-223	ENST00000324771	CCDC157	Q569K6	752 aa		11.71	□□□□□ -0.54
DDR1-223	ENST00000324771	RNF220	Q5VTB9	566 aa		11.71	□□□□□ -0.54
DDR1-223	ENST00000324771	ZCCHC8	Q6NZY4	707 aa	Known RBP	11.71	□□□□□ -0.54
DDR1-223	ENST00000324771	PSRC1	Q6PGN9	363 aa	Predicted RBP	11.71	□□□□□ -0.54
DDR1-223	ENST00000324771		Q6ZVL8	140 aa		11.71	□□□□□ -0.54
DDR1-223	ENST00000324771	IMP4	Q96G21	291 aa	Known RBP	11.71	□□□□□ -0.54
DDR1-223	ENST00000324771	HIC2	Q96JB3	615 aa		11.71	□□□□□ -0.54
DDR1-223	ENST00000324771	AARSD1	Q9BTE6	412 aa	Known RBP	11.71	□□□□□ -0.54
DDR1-223	ENST00000324771	MFSD1	Q9H3U5	465 aa		11.71	□□□□□ -0.54
DDR1-223	ENST00000324771	RIBC2	Q9H4K1	309 aa		11.71	□□□□□ -0.54
DDR1-223	ENST00000324771	STN1	Q9H668	368 aa	Known RBP	11.71	□□□□□ -0.54
DDR1-223	ENST00000324771	APOBEC3C	Q9NRW3	190 aa	Known RBP eCLIP	11.71	□□□□□ -0.54
DDR1-223	ENST00000324771	DUS2	Q9NX74	493 aa	Known RBP	11.71	□□□□□ -0.54
DDR1-223	ENST00000324771	LZTS1	Q9Y250	596 aa		11.71	□□□□□ -0.54
DDR1-223	ENST00000324771	GPSM3	Q9Y4H4	160 aa		11.71	□□□□□ -0.54
DDR1-223	ENST00000324771	AP4B1	Q9Y6B7	739 aa		11.71	□□□□□ -0.54
DDR1-223	ENST00000324771		A0A0G2JN53	185 aa		11.71	□□□□□ -0.54
DDR1-223	ENST00000324771	UPK3BL1	B0FP48	263 aa		11.71	□□□□□ -0.54
DDR1-223	ENST00000324771	UPK3BL2	E5RIL1	263 aa		11.71	□□□□□ -0.54
DDR1-223	ENST00000324771	SLC31A1	O15431	190 aa		11.71	□□□□□ -0.54
DDR1-223	ENST00000324771	MTHFD1	P11586	935 aa	Known RBP	11.71	□□□□□ -0.54
DDR1-223	ENST00000324771	PTPN2	P17706	415 aa		11.71	□□□□□ -0.54
DDR1-223	ENST00000324771	MAPK1	P28482	360 aa		11.71	□□□□□ -0.54
DDR1-223	ENST00000324771	ZNF276	Q8N554	614 aa		11.71	□□□□□ -0.54
DDR1-223	ENST00000324771	CPSF7	Q8N684	471 aa	Known RBP	11.71	□□□□□ -0.54
DDR1-223	ENST00000324771	IMPAD1	Q9NX62	359 aa		11.71	□□□□□ -0.54
DDR1-223	ENST00000324771	TBC1D3D	A0A087WVF3	549 aa		11.7	□□□□□ -0.54
DDR1-223	ENST00000324771	TBC1D3I	A0A087WXS9	549 aa		11.7	□□□□□ -0.54
DDR1-223	ENST00000324771	TBC1D3E	A0A087X179	549 aa		11.7	□□□□□ -0.54
DDR1-223	ENST00000324771	TBC1D3K	A0A087X1G2	549 aa		11.7	□□□□□ -0.54

Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms