RNA–Protein interactions for RNA: ENST00000317243.9

ZNF554-201, Transcript of zinc finger protein 554, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF554, Length 2,736 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF554-201ENST00000317243 PCSK9Q8NBP7 692 aaKnown RBP19.25■□□□□ 0.67
ZNF554-201ENST00000317243 TTC16Q8NEE8 873 aa19.25■□□□□ 0.67
ZNF554-201ENST00000317243 FEM1CQ96JP0 617 aa19.25■□□□□ 0.67
ZNF554-201ENST00000317243 SLC45A3Q96JT2 553 aa19.25■□□□□ 0.67
ZNF554-201ENST00000317243 SEMA3CQ99985 751 aa19.25■□□□□ 0.67
ZNF554-201ENST00000317243 HGH1Q9BTY7 390 aa19.25■□□□□ 0.67
ZNF554-201ENST00000317243 NDEL1Q9GZM8 345 aa19.25■□□□□ 0.67
ZNF554-201ENST00000317243 AGPAT4Q9NRZ5 378 aa19.25■□□□□ 0.67
ZNF554-201ENST00000317243 PSME2Q9UL46 239 aa19.25■□□□□ 0.67
ZNF554-201ENST00000317243 FNDC3AQ9Y2H6 1198 aaKnown RBP19.25■□□□□ 0.67
ZNF554-201ENST00000317243 TRAF6Q9Y4K3 522 aa19.25■□□□□ 0.67
ZNF554-201ENST00000317243 CCDC162PA2VCL2 907 aa19.24■□□□□ 0.67
ZNF554-201ENST00000317243 LRRC14BA6NHZ5 514 aa19.24■□□□□ 0.67
ZNF554-201ENST00000317243 PPP6CO00743 305 aa19.24■□□□□ 0.67
ZNF554-201ENST00000317243 TCEA1P23193 301 aaKnown RBP19.24■□□□□ 0.67
ZNF554-201ENST00000317243 ELK4P28324 431 aa19.24■□□□□ 0.67
ZNF554-201ENST00000317243 OXTRP30559 389 aa19.24■□□□□ 0.67
ZNF554-201ENST00000317243 SLC11A1P49279 550 aa19.24■□□□□ 0.67
ZNF554-201ENST00000317243 TMBIM6P55061 237 aa19.24■□□□□ 0.67
ZNF554-201ENST00000317243 GPR158Q5T848 1215 aa19.24■□□□□ 0.67
ZNF554-201ENST00000317243 RNF180Q86T96 592 aa19.24■□□□□ 0.67
ZNF554-201ENST00000317243 IFNEQ86WN2 208 aa19.24■□□□□ 0.67
ZNF554-201ENST00000317243 RYBPQ8N488 228 aaPredicted RBP19.24■□□□□ 0.67
ZNF554-201ENST00000317243 OR7D4Q8NG98 312 aa19.24■□□□□ 0.67
ZNF554-201ENST00000317243 MAGEE2Q8TD90 523 aaPredicted RBP19.24■□□□□ 0.67
ZNF554-201ENST00000317243 C3orf30Q96M34 536 aa19.24■□□□□ 0.67
ZNF554-201ENST00000317243 MTMR11A4FU01 709 aa19.24■□□□□ 0.67
ZNF554-201ENST00000317243 UBFD1O14562 309 aaKnown RBP19.24■□□□□ 0.67
ZNF554-201ENST00000317243 SNAP29O95721 258 aa19.24■□□□□ 0.67
ZNF554-201ENST00000317243 PAX3P23760 479 aa19.24■□□□□ 0.67
ZNF554-201ENST00000317243 FASP25445 335 aa19.24■□□□□ 0.67
ZNF554-201ENST00000317243 EEF1DP29692 281 aaKnown RBP19.24■□□□□ 0.67
ZNF554-201ENST00000317243 SLC6A4P31645 630 aa19.24■□□□□ 0.67
ZNF554-201ENST00000317243 RAD23AP54725 363 aa19.24■□□□□ 0.67
ZNF554-201ENST00000317243 STX1BP61266 288 aa19.24■□□□□ 0.67
ZNF554-201ENST00000317243 ZNF33AQ06730 810 aa19.24■□□□□ 0.67
ZNF554-201ENST00000317243 POLD3Q15054 466 aaPredicted RBP19.24■□□□□ 0.67
ZNF554-201ENST00000317243 VPS26BQ4G0F5 336 aa19.24■□□□□ 0.67
ZNF554-201ENST00000317243 CYBRD1Q53TN4 286 aa19.24■□□□□ 0.67
ZNF554-201ENST00000317243 FUNDC1Q8IVP5 155 aa19.24■□□□□ 0.67
ZNF554-201ENST00000317243 NAT16Q8N8M0 369 aa19.24■□□□□ 0.67
ZNF554-201ENST00000317243 SH3YL1Q96HL8 342 aaPredicted RBP19.24■□□□□ 0.67
ZNF554-201ENST00000317243 C9orf16Q9BUW7 83 aa19.24■□□□□ 0.67
ZNF554-201ENST00000317243 RAD21L1Q9H4I0 556 aa19.24■□□□□ 0.67
ZNF554-201ENST00000317243 PCDH12Q9NPG4 1184 aa19.24■□□□□ 0.67
ZNF554-201ENST00000317243 PKD2L2Q9NZM6 624 aa19.24■□□□□ 0.67
ZNF554-201ENST00000317243 A0A1W2PQ45 241 aaPredicted RBP19.24■□□□□ 0.67
ZNF554-201ENST00000317243 A0A1W2PQY0 241 aa19.24■□□□□ 0.67
ZNF554-201ENST00000317243 NME4O00746 187 aa19.24■□□□□ 0.67
ZNF554-201ENST00000317243 ATXN1LP0C7T5 689 aaKnown RBP19.24■□□□□ 0.67
ZNF554-201ENST00000317243 CHRM3P20309 590 aa19.24■□□□□ 0.67
ZNF554-201ENST00000317243 CAPGP40121 348 aa19.24■□□□□ 0.67
ZNF554-201ENST00000317243 RGRP47804 291 aa19.24■□□□□ 0.67
ZNF554-201ENST00000317243 SGSHP51688 502 aa19.24■□□□□ 0.67
ZNF554-201ENST00000317243 NKX3-2P78367 333 aa19.24■□□□□ 0.67
ZNF554-201ENST00000317243 TECRLQ5HYJ1 363 aa19.24■□□□□ 0.67
ZNF554-201ENST00000317243 KIAA0930Q6ICG6 404 aaPredicted RBP19.24■□□□□ 0.67
ZNF554-201ENST00000317243 RAVER1Q8IY67 606 aaKnown RBP19.24■□□□□ 0.67
ZNF554-201ENST00000317243 ZNF347Q96SE7 839 aa19.24■□□□□ 0.67
ZNF554-201ENST00000317243 ALG9Q9H6U8 611 aa19.24■□□□□ 0.67
ZNF554-201ENST00000317243 TMEM248Q9NWD8 314 aa19.24■□□□□ 0.67
ZNF554-201ENST00000317243 CHD7Q9P2D1 2997 aa19.23■□□□□ 0.67
ZNF554-201ENST00000317243 TOR1BO14657 336 aa19.23■□□□□ 0.67
ZNF554-201ENST00000317243 ACOX3O15254 700 aa19.23■□□□□ 0.67
ZNF554-201ENST00000317243 JRKO75564 520 aa19.23■□□□□ 0.67
ZNF554-201ENST00000317243 GJB5O95377 273 aa19.23■□□□□ 0.67
ZNF554-201ENST00000317243 RHOQP17081 205 aa19.23■□□□□ 0.67
ZNF554-201ENST00000317243 HLCSP50747 726 aa19.23■□□□□ 0.67
ZNF554-201ENST00000317243 RENBPP51606 427 aa19.23■□□□□ 0.67
ZNF554-201ENST00000317243 DNAJB13P59910 316 aa19.23■□□□□ 0.67
ZNF554-201ENST00000317243 DSG4Q86SJ6 1040 aa19.23■□□□□ 0.67
ZNF554-201ENST00000317243 C1orf74Q96LT6 269 aa19.23■□□□□ 0.67
ZNF554-201ENST00000317243 SEZ6LQ9BYH1 1024 aa19.23■□□□□ 0.67
ZNF554-201ENST00000317243 LHPPQ9H008 270 aa19.23■□□□□ 0.67
ZNF554-201ENST00000317243 CAMSAP3Q9P1Y5 1249 aaPredicted RBP19.23■□□□□ 0.67
ZNF554-201ENST00000317243 PLXNA3P51805 1871 aa19.23■□□□□ 0.67
ZNF554-201ENST00000317243 A0A087X1B8 175 aa19.23■□□□□ 0.67
ZNF554-201ENST00000317243 PSMD3O43242 534 aa19.23■□□□□ 0.67
ZNF554-201ENST00000317243 SYNCRIPO60506 623 aaKnown RBP19.23■□□□□ 0.67
ZNF554-201ENST00000317243 MYO1DO94832 1006 aa19.23■□□□□ 0.67
ZNF554-201ENST00000317243 MT-ND1P03886 318 aa19.23■□□□□ 0.67
ZNF554-201ENST00000317243 ALDOCP09972 364 aaKnown RBP19.23■□□□□ 0.67
ZNF554-201ENST00000317243 ATF6P18850 670 aa19.23■□□□□ 0.67
ZNF554-201ENST00000317243 IL10P22301 178 aa19.23■□□□□ 0.67
ZNF554-201ENST00000317243 KPNA2P52292 529 aaKnown RBP19.23■□□□□ 0.67
ZNF554-201ENST00000317243 RPS24P62847 133 aaKnown RBP19.23■□□□□ 0.67
ZNF554-201ENST00000317243 IFITM3Q01628 133 aa19.23■□□□□ 0.67
ZNF554-201ENST00000317243 SPCS2Q15005 226 aa19.23■□□□□ 0.67
ZNF554-201ENST00000317243 ATP6AP1Q15904 470 aa19.23■□□□□ 0.67
ZNF554-201ENST00000317243 MSANTD2Q6P1R3 559 aa19.23■□□□□ 0.67
ZNF554-201ENST00000317243 DDIASQ8IXT1 998 aa19.23■□□□□ 0.67
ZNF554-201ENST00000317243 STON2Q8WXE9 905 aa19.23■□□□□ 0.67
ZNF554-201ENST00000317243 SGCDQ92629 289 aa19.23■□□□□ 0.67
ZNF554-201ENST00000317243 FAR2Q96K12 515 aa19.23■□□□□ 0.67
ZNF554-201ENST00000317243 C8orf48Q96LL4 319 aa19.23■□□□□ 0.67
ZNF554-201ENST00000317243 CGREF1Q99674 301 aa19.23■□□□□ 0.67
ZNF554-201ENST00000317243 TRIM62Q9BVG3 475 aa19.23■□□□□ 0.67
ZNF554-201ENST00000317243 SCN5AQ14524 2016 aa19.22■□□□□ 0.67
ZNF554-201ENST00000317243 A0A0J9YYE9 177 aa19.22■□□□□ 0.67
ZNF554-201ENST00000317243 CLDN25C9JDP6 229 aa19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms