RNA–Protein interactions for RNA: ENST00000313654.13

LAMA3-202, Transcript of laminin subunit alpha 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LAMA3, Length 10,661 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA3-202ENST00000313654 RALGPS2Q86X27 583 aaPredicted RBP12.72□□□□□ -0.37
LAMA3-202ENST00000313654 C7orf61Q8IZ16 206 aa12.72□□□□□ -0.37
LAMA3-202ENST00000313654 TRDMT1O14717 391 aaKnown RBP12.71□□□□□ -0.37
LAMA3-202ENST00000313654 MT-ND1P03886 318 aa12.71□□□□□ -0.37
LAMA3-202ENST00000313654 HOXD10P28358 340 aa12.71□□□□□ -0.37
LAMA3-202ENST00000313654 AFF3P51826 1226 aaKnown RBP12.71□□□□□ -0.37
LAMA3-202ENST00000313654 TMBIM6P55061 237 aa12.71□□□□□ -0.37
LAMA3-202ENST00000313654 HERVK_113P62684 666 aa12.71□□□□□ -0.37
LAMA3-202ENST00000313654 CRADDP78560 199 aa12.71□□□□□ -0.37
LAMA3-202ENST00000313654 ARFRP1Q13795 201 aa12.71□□□□□ -0.37
LAMA3-202ENST00000313654 SPPL2CQ8IUH8 684 aa12.71□□□□□ -0.37
LAMA3-202ENST00000313654 OR2T12Q8NG77 320 aa12.71□□□□□ -0.37
LAMA3-202ENST00000313654 HDAC7Q8WUI4 952 aa12.71□□□□□ -0.37
LAMA3-202ENST00000313654 ZNHIT2Q9UHR6 403 aa12.71□□□□□ -0.37
LAMA3-202ENST00000313654 PDE10AQ9Y233 779 aa12.71□□□□□ -0.37
LAMA3-202ENST00000313654 MAP3K8P41279 467 aa12.71□□□□□ -0.37
LAMA3-202ENST00000313654 GNA12Q03113 381 aa12.71□□□□□ -0.37
LAMA3-202ENST00000313654 LARS2Q15031 903 aaKnown RBP12.71□□□□□ -0.37
LAMA3-202ENST00000313654 STAG3L4Q8TBR4 150 aa12.71□□□□□ -0.37
LAMA3-202ENST00000313654 TATDN2Q93075 761 aa12.71□□□□□ -0.37
LAMA3-202ENST00000313654 PPCDCQ96CD2 204 aa12.71□□□□□ -0.37
LAMA3-202ENST00000313654 PPM1MQ96MI6 270 aa12.71□□□□□ -0.37
LAMA3-202ENST00000313654 LMTK3Q96Q04 1460 aa12.71□□□□□ -0.37
LAMA3-202ENST00000313654 RBAK-RBAKDNI3L0D1 243 aa12.71□□□□□ -0.37
LAMA3-202ENST00000313654 SLC22A1O15245 554 aa12.71□□□□□ -0.37
LAMA3-202ENST00000313654 PRLRP16471 622 aa12.71□□□□□ -0.37
LAMA3-202ENST00000313654 DDX6P26196 483 aaKnown RBP eCLIP12.71□□□□□ -0.37
LAMA3-202ENST00000313654 CDH5P33151 784 aaPredicted RBP12.71□□□□□ -0.37
LAMA3-202ENST00000313654 LIN52Q52LA3 116 aa12.71□□□□□ -0.37
LAMA3-202ENST00000313654 FAM122CQ6P4D5 195 aa12.71□□□□□ -0.37
LAMA3-202ENST00000313654 CDH22Q9UJ99 828 aa12.71□□□□□ -0.37
LAMA3-202ENST00000313654 MFHAS1Q9Y4C4 1052 aa12.71□□□□□ -0.37
LAMA3-202ENST00000313654 ISM1B1AKI9 464 aa12.71□□□□□ -0.37
LAMA3-202ENST00000313654 TPST2O60704 377 aa12.71□□□□□ -0.37
LAMA3-202ENST00000313654 RAMP2O60895 175 aa12.71□□□□□ -0.37
LAMA3-202ENST00000313654 PGLSO95336 258 aa12.71□□□□□ -0.37
LAMA3-202ENST00000313654 ZNF616Q08AN1 781 aa12.71□□□□□ -0.37
LAMA3-202ENST00000313654 PROSER3Q2NL68 480 aa12.71□□□□□ -0.37
LAMA3-202ENST00000313654 CADM2Q8N3J6 435 aa12.71□□□□□ -0.37
LAMA3-202ENST00000313654 RAET1EQ8TD07 263 aa12.71□□□□□ -0.37
LAMA3-202ENST00000313654 ZDHHC6Q9H6R6 413 aa12.71□□□□□ -0.37
LAMA3-202ENST00000313654 MAP4K5Q9Y4K4 846 aa12.71□□□□□ -0.37
LAMA3-202ENST00000313654 SLC12A8A0AV02 714 aa12.71□□□□□ -0.37
LAMA3-202ENST00000313654 FUT4P22083 530 aa12.71□□□□□ -0.37
LAMA3-202ENST00000313654 GK5Q6ZS86 529 aa12.71□□□□□ -0.37
LAMA3-202ENST00000313654 NINJ2Q9NZG7 142 aa12.71□□□□□ -0.37
LAMA3-202ENST00000313654 GULP1Q9UBP9 304 aa12.71□□□□□ -0.37
LAMA3-202ENST00000313654 CYP3A5P20815 502 aa12.71□□□□□ -0.38
LAMA3-202ENST00000313654 LIMK2P53671 638 aa12.71□□□□□ -0.38
LAMA3-202ENST00000313654 USP45Q70EL2 814 aa12.71□□□□□ -0.38
LAMA3-202ENST00000313654 WACQ9BTA9 647 aa12.71□□□□□ -0.38
LAMA3-202ENST00000313654 ASPNQ9BXN1 380 aa12.71□□□□□ -0.38
LAMA3-202ENST00000313654 MYO5CQ9NQX4 1742 aa12.71□□□□□ -0.38
LAMA3-202ENST00000313654 BRWD1Q9NSI6 2320 aa12.71□□□□□ -0.38
LAMA3-202ENST00000313654 TULP2O00295 520 aa12.71□□□□□ -0.38
LAMA3-202ENST00000313654 MYBL2P10244 700 aa12.71□□□□□ -0.38
LAMA3-202ENST00000313654 TSPAN8P19075 237 aa12.71□□□□□ -0.38
LAMA3-202ENST00000313654 C8orf48Q96LL4 319 aa12.71□□□□□ -0.38
LAMA3-202ENST00000313654 NXF3Q9H4D5 531 aaKnown RBP12.71□□□□□ -0.38
LAMA3-202ENST00000313654 ASTN2O75129 1339 aaPredicted RBP12.71□□□□□ -0.38
LAMA3-202ENST00000313654 IFNA1P01562 189 aa12.71□□□□□ -0.38
LAMA3-202ENST00000313654 RHOP08100 348 aa12.71□□□□□ -0.38
LAMA3-202ENST00000313654 DYRK1AQ13627 763 aa12.71□□□□□ -0.38
LAMA3-202ENST00000313654 NIPAL1Q6NVV3 410 aa12.71□□□□□ -0.38
LAMA3-202ENST00000313654 FCGR1BQ92637 280 aa12.71□□□□□ -0.38
LAMA3-202ENST00000313654 MRPS31Q92665 395 aaKnown RBP12.71□□□□□ -0.38
LAMA3-202ENST00000313654 WDR6Q9NNW5 1121 aaKnown RBP12.71□□□□□ -0.38
LAMA3-202ENST00000313654 CD93Q9NPY3 652 aa12.71□□□□□ -0.38
LAMA3-202ENST00000313654 MMP13P45452 471 aa12.7□□□□□ -0.38
LAMA3-202ENST00000313654 EPHB3P54753 998 aa12.7□□□□□ -0.38
LAMA3-202ENST00000313654 IRF8Q02556 426 aa12.7□□□□□ -0.38
LAMA3-202ENST00000313654 FNDC3BQ53EP0 1204 aaKnown RBP12.7□□□□□ -0.38
LAMA3-202ENST00000313654 PPP1R15BQ5SWA1 713 aa12.7□□□□□ -0.38
LAMA3-202ENST00000313654 ERGIC2Q96RQ1 377 aa12.7□□□□□ -0.38
LAMA3-202ENST00000313654 CFL2Q9Y281 166 aa12.7□□□□□ -0.38
LAMA3-202ENST00000313654 A0A0U1RQK1 487 aa12.7□□□□□ -0.38
LAMA3-202ENST00000313654 CYB561D2O14569 222 aa12.7□□□□□ -0.38
LAMA3-202ENST00000313654 PRMT5O14744 637 aaPredicted RBP12.7□□□□□ -0.38
LAMA3-202ENST00000313654 CHRM5P08912 532 aaPredicted RBP12.7□□□□□ -0.38
LAMA3-202ENST00000313654 PPIBP23284 216 aaKnown RBP12.7□□□□□ -0.38
LAMA3-202ENST00000313654 ACVR2AP27037 513 aa12.7□□□□□ -0.38
LAMA3-202ENST00000313654 TUBP50607 506 aa12.7□□□□□ -0.38
LAMA3-202ENST00000313654 NRG1Q02297 640 aaPredicted RBP12.7□□□□□ -0.38
LAMA3-202ENST00000313654 SIM2Q14190 667 aaPredicted RBP12.7□□□□□ -0.38
LAMA3-202ENST00000313654 RNASEH2BQ5TBB1 312 aaKnown RBP12.7□□□□□ -0.38
LAMA3-202ENST00000313654 PTGR2Q8N8N7 351 aaPredicted RBP12.7□□□□□ -0.38
LAMA3-202ENST00000313654 HELQQ8TDG4 1101 aa12.7□□□□□ -0.38
LAMA3-202ENST00000313654 CNDP2Q96KP4 475 aaKnown RBP12.7□□□□□ -0.38
LAMA3-202ENST00000313654 STRA6Q9BX79 667 aa12.7□□□□□ -0.38
LAMA3-202ENST00000313654 RANBP3Q9H6Z4 567 aaPredicted RBP12.7□□□□□ -0.38
LAMA3-202ENST00000313654 KAT8Q9H7Z6 458 aaKnown RBP12.7□□□□□ -0.38
LAMA3-202ENST00000313654 PPP4R1LQ9P1A2 415 aa12.7□□□□□ -0.38
LAMA3-202ENST00000313654 TNFRSF11BO00300 401 aa12.7□□□□□ -0.38
LAMA3-202ENST00000313654 HNRNPLP14866 589 aaKnown RBP eCLIP12.7□□□□□ -0.38
LAMA3-202ENST00000313654 ALDH3B2P48448 385 aa12.7□□□□□ -0.38
LAMA3-202ENST00000313654 MTMR2Q13614 643 aa12.7□□□□□ -0.38
LAMA3-202ENST00000313654 FSCN1Q16658 493 aaKnown RBP12.7□□□□□ -0.38
LAMA3-202ENST00000313654 MB21D2Q8IYB1 491 aaPredicted RBP12.7□□□□□ -0.38
LAMA3-202ENST00000313654 BORCS8Q96FH0 119 aa12.7□□□□□ -0.38
LAMA3-202ENST00000313654 KCTD7Q96MP8 289 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms