RNA–Protein interactions for RNA: ENST00000310441.11

HCFC1-201, Transcript of host cell factor C1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HCFC1, Length 8,869 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-201ENST00000310441 IQSEC2Q5JU85 1478 aa15.37■□□□□ 0.05
HCFC1-201ENST00000310441 SRPRAP08240 638 aaKnown RBP15.36■□□□□ 0.05
HCFC1-201ENST00000310441 PSEN2P49810 448 aa15.36■□□□□ 0.05
HCFC1-201ENST00000310441 PPP3CAQ08209 521 aa15.36■□□□□ 0.05
HCFC1-201ENST00000310441 OR52K2Q8NGK3 314 aa15.36■□□□□ 0.05
HCFC1-201ENST00000310441 DNAJB3Q8WWF6 145 aa15.36■□□□□ 0.05
HCFC1-201ENST00000310441 NUDT4Q9NZJ9 180 aa15.36■□□□□ 0.05
HCFC1-201ENST00000310441 GLS2Q9UI32 602 aa15.36■□□□□ 0.05
HCFC1-201ENST00000310441 PLLPQ9Y342 182 aa15.36■□□□□ 0.05
HCFC1-201ENST00000310441 LMTK2Q8IWU2 1503 aa15.36■□□□□ 0.05
HCFC1-201ENST00000310441 HCN1O60741 890 aa15.36■□□□□ 0.05
HCFC1-201ENST00000310441 PRAMEF12O95522 483 aa15.36■□□□□ 0.05
HCFC1-201ENST00000310441 PUS10Q3MIT2 529 aaKnown RBP15.36■□□□□ 0.05
HCFC1-201ENST00000310441 FOXR2Q6PJQ5 311 aa15.36■□□□□ 0.05
HCFC1-201ENST00000310441 TMEM161BQ8NDZ6 487 aa15.36■□□□□ 0.05
HCFC1-201ENST00000310441 SENP8Q96LD8 212 aa15.36■□□□□ 0.05
HCFC1-201ENST00000310441 AGR2O95994 175 aa15.36■□□□□ 0.05
HCFC1-201ENST00000310441 HSD3B2P26439 372 aa15.36■□□□□ 0.05
HCFC1-201ENST00000310441 CDH8P55286 799 aa15.36■□□□□ 0.05
HCFC1-201ENST00000310441 LRRC70Q7Z2Q7 622 aa15.36■□□□□ 0.05
HCFC1-201ENST00000310441 DGLUCYQ7Z3D6 616 aa15.36■□□□□ 0.05
HCFC1-201ENST00000310441 NODALQ96S42 347 aa15.36■□□□□ 0.05
HCFC1-201ENST00000310441 S100A14Q9HCY8 104 aa15.36■□□□□ 0.05
HCFC1-201ENST00000310441 AGO1Q9UL18 857 aaKnown RBP15.36■□□□□ 0.05
HCFC1-201ENST00000310441 TNFRSF11BO00300 401 aa15.36■□□□□ 0.05
HCFC1-201ENST00000310441 HOXC8P31273 242 aa15.36■□□□□ 0.05
HCFC1-201ENST00000310441 HEPACAMQ14CZ8 416 aa15.36■□□□□ 0.05
HCFC1-201ENST00000310441 HERC3Q15034 1050 aa15.36■□□□□ 0.05
HCFC1-201ENST00000310441 DPY19L1Q2PZI1 675 aa15.36■□□□□ 0.05
HCFC1-201ENST00000310441 CAMK1GQ96NX5 476 aa15.36■□□□□ 0.05
HCFC1-201ENST00000310441 SEMA3CQ99985 751 aa15.36■□□□□ 0.05
HCFC1-201ENST00000310441 SMPD4Q9NXE4 827 aa15.36■□□□□ 0.05
HCFC1-201ENST00000310441 KIAA1522Q9P206 1035 aaPredicted RBP15.36■□□□□ 0.05
HCFC1-201ENST00000310441 ZNF490Q9ULM2 529 aaPredicted RBP15.36■□□□□ 0.05
HCFC1-201ENST00000310441 PCDHGB6Q9Y5F9 930 aa15.36■□□□□ 0.05
HCFC1-201ENST00000310441 FKBP7Q9Y680 259 aa15.36■□□□□ 0.05
HCFC1-201ENST00000310441 LTN1O94822 1766 aa15.36■□□□□ 0.05
HCFC1-201ENST00000310441 EPHA3P29320 983 aa15.36■□□□□ 0.05
HCFC1-201ENST00000310441 APLP1P51693 650 aa15.36■□□□□ 0.05
HCFC1-201ENST00000310441 FAM76BQ5HYJ3 339 aa15.36■□□□□ 0.05
HCFC1-201ENST00000310441 CNDP2Q96KP4 475 aaKnown RBP15.36■□□□□ 0.05
HCFC1-201ENST00000310441 RNF157Q96PX1 679 aa15.36■□□□□ 0.05
HCFC1-201ENST00000310441 DNAJC11Q9NVH1 559 aa15.36■□□□□ 0.05
HCFC1-201ENST00000310441 INTS10Q9NVR2 710 aaKnown RBP15.36■□□□□ 0.05
HCFC1-201ENST00000310441 TBC1D14Q9P2M4 693 aa15.36■□□□□ 0.05
HCFC1-201ENST00000310441 PTCH2Q9Y6C5 1203 aa15.36■□□□□ 0.05
HCFC1-201ENST00000310441 ARHGEF28Q8N1W1 1705 aaKnown RBP15.36■□□□□ 0.05
HCFC1-201ENST00000310441 SPATA31A6Q5VVP1 1343 aa15.36■□□□□ 0.05
HCFC1-201ENST00000310441 VSTM5A8MXK1 200 aa15.36■□□□□ 0.05
HCFC1-201ENST00000310441 H3BUI4 141 aa15.36■□□□□ 0.05
HCFC1-201ENST00000310441 ERAL1O75616 437 aaKnown RBP15.36■□□□□ 0.05
HCFC1-201ENST00000310441 NOL4O94818 638 aa15.36■□□□□ 0.05
HCFC1-201ENST00000310441 LRATO95237 230 aa15.36■□□□□ 0.05
HCFC1-201ENST00000310441 VARSP26640 1264 aaKnown RBP15.36■□□□□ 0.05
HCFC1-201ENST00000310441 SLC6A4P31645 630 aa15.36■□□□□ 0.05
HCFC1-201ENST00000310441 KHKP50053 298 aa15.36■□□□□ 0.05
HCFC1-201ENST00000310441 TUBA1BP68363 451 aa15.36■□□□□ 0.05
HCFC1-201ENST00000310441 CBLBQ13191 982 aa15.36■□□□□ 0.05
HCFC1-201ENST00000310441 TUBA1AQ71U36 451 aa15.36■□□□□ 0.05
HCFC1-201ENST00000310441 NATD1Q8N6N6 113 aa15.36■□□□□ 0.05
HCFC1-201ENST00000310441 TCF7L1Q9HCS4 588 aa15.36■□□□□ 0.05
HCFC1-201ENST00000310441 FARSBQ9NSD9 589 aaKnown RBP15.36■□□□□ 0.05
HCFC1-201ENST00000310441 VWDEQ8N2E2 1590 aa15.36■□□□□ 0.05
HCFC1-201ENST00000310441 TEX13CA0A0J9YWL9 993 aa15.36■□□□□ 0.05
HCFC1-201ENST00000310441 ILVBLA1L0T0 632 aa15.36■□□□□ 0.05
HCFC1-201ENST00000310441 SCELO95171 688 aa15.36■□□□□ 0.05
HCFC1-201ENST00000310441 ATP5A1P25705 553 aaKnown RBP15.36■□□□□ 0.05
HCFC1-201ENST00000310441 CDKL4Q5MAI5 379 aa15.36■□□□□ 0.05
HCFC1-201ENST00000310441 SLC44A3Q8N4M1 653 aa15.36■□□□□ 0.05
HCFC1-201ENST00000310441 TTLQ8NG68 377 aa15.36■□□□□ 0.05
HCFC1-201ENST00000310441 HCAR2Q8TDS4 363 aa15.36■□□□□ 0.05
HCFC1-201ENST00000310441 MTMR10Q9NXD2 777 aa15.36■□□□□ 0.05
HCFC1-201ENST00000310441 PRR36Q9H6K5 1346 aa15.36■□□□□ 0.05
HCFC1-201ENST00000310441 DENND6BQ8NEG7 585 aa15.35■□□□□ 0.05
HCFC1-201ENST00000310441 SLC1A2P43004 574 aa15.35■□□□□ 0.05
HCFC1-201ENST00000310441 XKR4Q5GH76 650 aa15.35■□□□□ 0.05
HCFC1-201ENST00000310441 DNM1P34Q6PK57 102 aa15.35■□□□□ 0.05
HCFC1-201ENST00000310441 OTOP1Q7RTM1 612 aa15.35■□□□□ 0.05
HCFC1-201ENST00000310441 PHF13Q86YI8 300 aaPredicted RBP15.35■□□□□ 0.05
HCFC1-201ENST00000310441 PM20D2Q8IYS1 436 aa15.35■□□□□ 0.05
HCFC1-201ENST00000310441 DPF3Q92784 378 aa15.35■□□□□ 0.05
HCFC1-201ENST00000310441 TPK1Q9H3S4 243 aa15.35■□□□□ 0.05
HCFC1-201ENST00000310441 PHPT1Q9NRX4 125 aaPredicted RBP15.35■□□□□ 0.05
HCFC1-201ENST00000310441 RDH8Q9NYR8 311 aa15.35■□□□□ 0.05
HCFC1-201ENST00000310441 PTTG2Q9NZH5 202 aa15.35■□□□□ 0.05
HCFC1-201ENST00000310441 RABL2AQ9UBK7 228 aaPredicted RBP15.35■□□□□ 0.05
HCFC1-201ENST00000310441 RABL2BQ9UNT1 228 aa15.35■□□□□ 0.05
HCFC1-201ENST00000310441 VWA7Q9Y334 891 aa15.35■□□□□ 0.05
HCFC1-201ENST00000310441 ISM1B1AKI9 464 aa15.35■□□□□ 0.05
HCFC1-201ENST00000310441 OR3A3P47888 321 aa15.35■□□□□ 0.05
HCFC1-201ENST00000310441 OR3A2P47893 321 aa15.35■□□□□ 0.05
HCFC1-201ENST00000310441 LACTB2Q53H82 288 aaPredicted RBP15.35■□□□□ 0.05
HCFC1-201ENST00000310441 TPGS1Q6ZTW0 290 aa15.35■□□□□ 0.05
HCFC1-201ENST00000310441 DEFB128Q7Z7B8 93 aa15.35■□□□□ 0.05
HCFC1-201ENST00000310441 CUZD1Q86UP6 607 aa15.35■□□□□ 0.05
HCFC1-201ENST00000310441 ZNF471Q9BX82 626 aaPredicted RBP15.35■□□□□ 0.05
HCFC1-201ENST00000310441 TM7SF2O76062 418 aa15.35■□□□□ 0.05
HCFC1-201ENST00000310441 IFNA21P01568 189 aa15.35■□□□□ 0.05
HCFC1-201ENST00000310441 LINC00471Q8N535 108 aa15.35■□□□□ 0.05
HCFC1-201ENST00000310441 ANKHQ9HCJ1 492 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms