RNA–Protein interactions for RNA: ENST00000300527.8

COL6A2-201, Transcript of collagen type VI alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL6A2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-201ENST00000300527 SULT1C3Q6IMI6 304 aa14.54□□□□□ -0.08
COL6A2-201ENST00000300527 SLC27A1Q6PCB7 646 aa14.54□□□□□ -0.08
COL6A2-201ENST00000300527 TXNDC11Q6PKC3 985 aa14.54□□□□□ -0.08
COL6A2-201ENST00000300527 ZBED3Q96IU2 234 aaPredicted RBP14.54□□□□□ -0.08
COL6A2-201ENST00000300527 TDRD1Q9BXT4 1180 aaKnown RBP14.54□□□□□ -0.08
COL6A2-201ENST00000300527 YTHDF1Q9BYJ9 559 aaKnown RBP14.54□□□□□ -0.08
COL6A2-201ENST00000300527 RASSF1Q9NS23 344 aa14.54□□□□□ -0.08
COL6A2-201ENST00000300527 TRIM64A6NGJ6 449 aa14.54□□□□□ -0.08
COL6A2-201ENST00000300527 RHOBTB1O94844 696 aa14.54□□□□□ -0.08
COL6A2-201ENST00000300527 MFN2O95140 757 aa14.54□□□□□ -0.08
COL6A2-201ENST00000300527 S100A1P23297 94 aa14.54□□□□□ -0.08
COL6A2-201ENST00000300527 EDNRBP24530 442 aa14.54□□□□□ -0.08
COL6A2-201ENST00000300527 PIK3CGP48736 1102 aa14.54□□□□□ -0.08
COL6A2-201ENST00000300527 CLK1P49759 484 aaKnown RBP14.54□□□□□ -0.08
COL6A2-201ENST00000300527 TSNQ15631 228 aaKnown RBP14.54□□□□□ -0.08
COL6A2-201ENST00000300527 SYT16Q17RD7 645 aa14.54□□□□□ -0.08
COL6A2-201ENST00000300527 SGO1Q5FBB7 561 aa14.54□□□□□ -0.08
COL6A2-201ENST00000300527 ZNF484Q5JVG2 852 aa14.54□□□□□ -0.08
COL6A2-201ENST00000300527 ATAD3BQ5T9A4 648 aa14.54□□□□□ -0.08
COL6A2-201ENST00000300527 KIAA0408Q6ZU52 694 aa14.54□□□□□ -0.08
COL6A2-201ENST00000300527 FLAD1Q8NFF5 587 aa14.54□□□□□ -0.08
COL6A2-201ENST00000300527 OR10A6Q8NH74 314 aa14.54□□□□□ -0.08
COL6A2-201ENST00000300527 OTUD5Q96G74 571 aa14.54□□□□□ -0.08
COL6A2-201ENST00000300527 FCRL5Q96RD9 977 aa14.54□□□□□ -0.08
COL6A2-201ENST00000300527 KIAA1522Q9P206 1035 aaPredicted RBP14.54□□□□□ -0.08
COL6A2-201ENST00000300527 ERVK-11Q9UQG0 969 aa14.54□□□□□ -0.08
COL6A2-201ENST00000300527 COL4A5P29400 1685 aa14.53□□□□□ -0.08
COL6A2-201ENST00000300527 H0YAE9 185 aa14.53□□□□□ -0.08
COL6A2-201ENST00000300527 GJB3O75712 270 aa14.53□□□□□ -0.08
COL6A2-201ENST00000300527 STAU1O95793 577 aaKnown RBP14.53□□□□□ -0.08
COL6A2-201ENST00000300527 DBTP11182 482 aaKnown RBP14.53□□□□□ -0.08
COL6A2-201ENST00000300527 ALOX12P18054 663 aa14.53□□□□□ -0.08
COL6A2-201ENST00000300527 FMO4P31512 558 aa14.53□□□□□ -0.08
COL6A2-201ENST00000300527 LILRA4P59901 499 aa14.53□□□□□ -0.08
COL6A2-201ENST00000300527 VAC14Q08AM6 782 aa14.53□□□□□ -0.08
COL6A2-201ENST00000300527 TAS2R42Q7RTR8 314 aa14.53□□□□□ -0.08
COL6A2-201ENST00000300527 CILP2Q8IUL8 1156 aa14.53□□□□□ -0.08
COL6A2-201ENST00000300527 TREX1Q9NSU2 369 aa14.53□□□□□ -0.08
COL6A2-201ENST00000300527 COMMD8Q9NX08 183 aa14.53□□□□□ -0.08
COL6A2-201ENST00000300527 GALPQ9UBC7 116 aa14.53□□□□□ -0.08
COL6A2-201ENST00000300527 ADGRE2Q9UHX3 823 aa14.53□□□□□ -0.08
COL6A2-201ENST00000300527 SLCO3A1Q9UIG8 710 aa14.53□□□□□ -0.08
COL6A2-201ENST00000300527 H3BRB1 525 aa14.53□□□□□ -0.08
COL6A2-201ENST00000300527 SLC1A7O00341 560 aa14.53□□□□□ -0.08
COL6A2-201ENST00000300527 ASNA1O43681 348 aa14.53□□□□□ -0.08
COL6A2-201ENST00000300527 SCNN1AP37088 669 aa14.53□□□□□ -0.08
COL6A2-201ENST00000300527 LEPRP48357 1165 aaKnown RBP14.53□□□□□ -0.08
COL6A2-201ENST00000300527 ATP4BP51164 291 aa14.53□□□□□ -0.08
COL6A2-201ENST00000300527 TUBA3CQ13748 450 aa14.53□□□□□ -0.08
COL6A2-201ENST00000300527 FAM187BQ17R55 369 aa14.53□□□□□ -0.08
COL6A2-201ENST00000300527 KIAA0319Q5VV43 1072 aa14.53□□□□□ -0.08
COL6A2-201ENST00000300527 UGT3A1Q6NUS8 523 aa14.53□□□□□ -0.08
COL6A2-201ENST00000300527 RIOX2Q8IUF8 465 aa14.53□□□□□ -0.08
COL6A2-201ENST00000300527 SLC2A13Q96QE2 648 aa14.53□□□□□ -0.08
COL6A2-201ENST00000300527 SMOQ99835 787 aa14.53□□□□□ -0.08
COL6A2-201ENST00000300527 ASPSCR1Q9BZE9 553 aa14.53□□□□□ -0.08
COL6A2-201ENST00000300527 CARS2Q9HA77 564 aaKnown RBP14.53□□□□□ -0.08
COL6A2-201ENST00000300527 VTA1Q9NP79 307 aa14.53□□□□□ -0.08
COL6A2-201ENST00000300527 PAK1IP1Q9NWT1 392 aaPredicted RBP14.53□□□□□ -0.08
COL6A2-201ENST00000300527 GDAP2Q9NXN4 497 aa14.53□□□□□ -0.08
COL6A2-201ENST00000300527 HACD3Q9P035 362 aa14.53□□□□□ -0.08
COL6A2-201ENST00000300527 ORC6Q9Y5N6 252 aa14.53□□□□□ -0.08
COL6A2-201ENST00000300527 COL11A1P12107 1806 aaPredicted RBP14.53□□□□□ -0.08
COL6A2-201ENST00000300527 A8MV72 311 aaPredicted RBP14.53□□□□□ -0.08
COL6A2-201ENST00000300527 SOCS7O14512 581 aa14.53□□□□□ -0.08
COL6A2-201ENST00000300527 ANGPTL1O95841 491 aa14.53□□□□□ -0.08
COL6A2-201ENST00000300527 GOT2P00505 430 aaKnown RBP14.53□□□□□ -0.08
COL6A2-201ENST00000300527 ALOX5P09917 674 aa14.53□□□□□ -0.08
COL6A2-201ENST00000300527 CDH1P12830 882 aa14.53□□□□□ -0.08
COL6A2-201ENST00000300527 IL12AP29459 219 aa14.53□□□□□ -0.08
COL6A2-201ENST00000300527 HOXA11P31270 313 aaPredicted RBP14.53□□□□□ -0.08
COL6A2-201ENST00000300527 EMX1Q04741 257 aaPredicted RBP14.53□□□□□ -0.08
COL6A2-201ENST00000300527 SEMA3BQ13214 749 aa14.53□□□□□ -0.08
COL6A2-201ENST00000300527 RBM48Q5RL73 367 aaKnown RBP14.53□□□□□ -0.08
COL6A2-201ENST00000300527 MCFD2Q8NI22 146 aa14.53□□□□□ -0.08
COL6A2-201ENST00000300527 UBXN10Q96LJ8 280 aa14.53□□□□□ -0.08
COL6A2-201ENST00000300527 HGH1Q9BTY7 390 aa14.53□□□□□ -0.08
COL6A2-201ENST00000300527 SCHIP1Q9P0W5 487 aaPredicted RBP14.53□□□□□ -0.08
COL6A2-201ENST00000300527 GPR45Q9Y5Y3 372 aa14.53□□□□□ -0.08
COL6A2-201ENST00000300527 CDC7O00311 574 aa14.52□□□□□ -0.08
COL6A2-201ENST00000300527 BTN3A1O00481 513 aa14.52□□□□□ -0.08
COL6A2-201ENST00000300527 PRKD3O94806 890 aa14.52□□□□□ -0.08
COL6A2-201ENST00000300527 OR4F21O95013 312 aa14.52□□□□□ -0.08
COL6A2-201ENST00000300527 KCNC4Q03721 635 aa14.52□□□□□ -0.08
COL6A2-201ENST00000300527 NR6A1Q15406 480 aa14.52□□□□□ -0.08
COL6A2-201ENST00000300527 GRIK4Q16099 956 aa14.52□□□□□ -0.08
COL6A2-201ENST00000300527 CTF1Q16619 201 aa14.52□□□□□ -0.08
COL6A2-201ENST00000300527 SV2CQ496J9 727 aa14.52□□□□□ -0.08
COL6A2-201ENST00000300527 ANKS6Q68DC2 871 aa14.52□□□□□ -0.08
COL6A2-201ENST00000300527 P2RY8Q86VZ1 359 aa14.52□□□□□ -0.08
COL6A2-201ENST00000300527 NT5C3BQ969T7 300 aa14.52□□□□□ -0.08
COL6A2-201ENST00000300527 FKBP10Q96AY3 582 aa14.52□□□□□ -0.08
COL6A2-201ENST00000300527 GAD1Q99259 594 aa14.52□□□□□ -0.08
COL6A2-201ENST00000300527 TP63Q9H3D4 680 aaPredicted RBP14.52□□□□□ -0.08
COL6A2-201ENST00000300527 AKIP1Q9NQ31 210 aa14.52□□□□□ -0.08
COL6A2-201ENST00000300527 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP14.52□□□□□ -0.08
COL6A2-201ENST00000300527 TMEM98Q9Y2Y6 226 aa14.52□□□□□ -0.08
COL6A2-201ENST00000300527 ARL5AQ9Y689 179 aa14.52□□□□□ -0.08
COL6A2-201ENST00000300527 NPEPPSL1A6NEC2 478 aa14.52□□□□□ -0.09
COL6A2-201ENST00000300527 SLC2A3P11169 496 aa14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms