RNA–Protein interactions for RNA: ENST00000286835.11

SCAF4-201, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCAF4, Length 4,193 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-201ENST00000286835 A0A1W2PQH9 124 aa13.28□□□□□ -0.28
SCAF4-201ENST00000286835 A8MX80 341 aa13.28□□□□□ -0.28
SCAF4-201ENST00000286835 DUSP11O75319 330 aaKnown RBP13.28□□□□□ -0.28
SCAF4-201ENST00000286835 SH3BGRLO75368 114 aa13.28□□□□□ -0.28
SCAF4-201ENST00000286835 SNAI1O95863 264 aaPredicted RBP13.28□□□□□ -0.28
SCAF4-201ENST00000286835 HSMCR30P0CW71 290 aa13.28□□□□□ -0.28
SCAF4-201ENST00000286835 NANOGP8Q6NSW7 305 aa13.28□□□□□ -0.28
SCAF4-201ENST00000286835 PAQR9Q6ZVX9 377 aa13.28□□□□□ -0.28
SCAF4-201ENST00000286835 LYSMD3Q7Z3D4 306 aa13.28□□□□□ -0.28
SCAF4-201ENST00000286835 GPR78Q96P69 363 aa13.28□□□□□ -0.28
SCAF4-201ENST00000286835 TRIM62Q9BVG3 475 aa13.28□□□□□ -0.28
SCAF4-201ENST00000286835 UGT2B28Q9BY64 529 aa13.28□□□□□ -0.28
SCAF4-201ENST00000286835 SLC25A51Q9H1U9 297 aa13.28□□□□□ -0.28
SCAF4-201ENST00000286835 NANOGQ9H9S0 305 aa13.28□□□□□ -0.28
SCAF4-201ENST00000286835 KLQ9UEF7 1012 aa13.28□□□□□ -0.28
SCAF4-201ENST00000286835 TBC1D30Q9Y2I9 924 aa13.28□□□□□ -0.28
SCAF4-201ENST00000286835 TBKBP1A7MCY6 615 aa13.28□□□□□ -0.28
SCAF4-201ENST00000286835 CLDN25C9JDP6 229 aa13.28□□□□□ -0.28
SCAF4-201ENST00000286835 SEC22BO75396 215 aa13.28□□□□□ -0.28
SCAF4-201ENST00000286835 SEC24AO95486 1093 aa13.28□□□□□ -0.28
SCAF4-201ENST00000286835 TBX18O95935 607 aa13.28□□□□□ -0.28
SCAF4-201ENST00000286835 ZNF37AP17032 561 aaPredicted RBP13.28□□□□□ -0.28
SCAF4-201ENST00000286835 RFC2P35250 354 aa13.28□□□□□ -0.28
SCAF4-201ENST00000286835 MAPKAPK3Q16644 382 aa13.28□□□□□ -0.28
SCAF4-201ENST00000286835 MOGQ16653 247 aa13.28□□□□□ -0.28
SCAF4-201ENST00000286835 LARP4Q71RC2 724 aaKnown RBP eCLIP13.28□□□□□ -0.283e-9■■□□□ 13.6
SCAF4-201ENST00000286835 PAGE2Q7Z2X7 111 aa13.28□□□□□ -0.28
SCAF4-201ENST00000286835 SYTL1Q8IYJ3 562 aa13.28□□□□□ -0.28
SCAF4-201ENST00000286835 ADGRG5Q8IZF4 528 aa13.28□□□□□ -0.28
SCAF4-201ENST00000286835 PACRGLQ8N7B6 248 aa13.28□□□□□ -0.28
SCAF4-201ENST00000286835 LINGO1Q96FE5 620 aa13.28□□□□□ -0.28
SCAF4-201ENST00000286835 TOR3AQ9H497 397 aa13.28□□□□□ -0.28
SCAF4-201ENST00000286835 MAP10Q9P2G4 905 aa13.28□□□□□ -0.28
SCAF4-201ENST00000286835 PTBP2Q9UKA9 531 aaKnown RBP13.28□□□□□ -0.28
SCAF4-201ENST00000286835 XPNPEP2O43895 674 aa13.28□□□□□ -0.28
SCAF4-201ENST00000286835 MAFKO60675 156 aa13.28□□□□□ -0.28
SCAF4-201ENST00000286835 FADS2O95864 444 aaKnown RBP13.28□□□□□ -0.28
SCAF4-201ENST00000286835 C1RP00736 705 aa13.28□□□□□ -0.28
SCAF4-201ENST00000286835 PORP16435 677 aaPredicted RBP13.28□□□□□ -0.28
SCAF4-201ENST00000286835 MATN1P21941 496 aa13.28□□□□□ -0.28
SCAF4-201ENST00000286835 GPX3P22352 226 aa13.28□□□□□ -0.28
SCAF4-201ENST00000286835 PRDX3P30048 256 aaKnown RBP13.28□□□□□ -0.28
SCAF4-201ENST00000286835 AXLP30530 894 aa13.28□□□□□ -0.28
SCAF4-201ENST00000286835 HALP42357 657 aa13.28□□□□□ -0.28
SCAF4-201ENST00000286835 POLD2P49005 469 aa13.28□□□□□ -0.28
SCAF4-201ENST00000286835 CRYBB1P53674 252 aaPredicted RBP13.28□□□□□ -0.28
SCAF4-201ENST00000286835 INAQ16352 499 aa13.28□□□□□ -0.28
SCAF4-201ENST00000286835 PDCD4Q53EL6 469 aaKnown RBP13.28□□□□□ -0.28
SCAF4-201ENST00000286835 FAM171A1Q5VUB5 890 aa13.28□□□□□ -0.28
SCAF4-201ENST00000286835 DCDC5Q6ZRR9 648 aa13.28□□□□□ -0.28
SCAF4-201ENST00000286835 NUDT8Q8WV74 236 aa13.28□□□□□ -0.28
SCAF4-201ENST00000286835 CAPSLQ8WWF8 208 aa13.28□□□□□ -0.28
SCAF4-201ENST00000286835 ISL2Q96A47 359 aa13.28□□□□□ -0.28
SCAF4-201ENST00000286835 SLC2A11Q9BYW1 496 aa13.28□□□□□ -0.28
SCAF4-201ENST00000286835 FAM124BQ9H5Z6 455 aaPredicted RBP13.28□□□□□ -0.28
SCAF4-201ENST00000286835 WWOXQ9NZC7 414 aa13.28□□□□□ -0.28
SCAF4-201ENST00000286835 PSME2Q9UL46 239 aa13.28□□□□□ -0.28
SCAF4-201ENST00000286835 LOC100506127A0A0U1RQW1 187 aa13.27□□□□□ -0.28
SCAF4-201ENST00000286835 A0A1W2PP18 115 aa13.27□□□□□ -0.28
SCAF4-201ENST00000286835 CNTN5O94779 1100 aa13.27□□□□□ -0.28
SCAF4-201ENST00000286835 RASAL1O95294 804 aa13.27□□□□□ -0.28
SCAF4-201ENST00000286835 VARSP26640 1264 aaKnown RBP13.27□□□□□ -0.28
SCAF4-201ENST00000286835 DMPKQ09013 629 aa13.27□□□□□ -0.28
SCAF4-201ENST00000286835 OR4D1Q15615 310 aa13.27□□□□□ -0.28
SCAF4-201ENST00000286835 AP5B1Q2VPB7 878 aa13.27□□□□□ -0.28
SCAF4-201ENST00000286835 TIGD5Q53EQ6 642 aa13.27□□□□□ -0.28
SCAF4-201ENST00000286835 SIRPB2Q5JXA9 342 aa13.27□□□□□ -0.28
SCAF4-201ENST00000286835 EFL1Q7Z2Z2 1120 aaKnown RBP13.27□□□□□ -0.28
SCAF4-201ENST00000286835 P3H2Q8IVL5 708 aa13.27□□□□□ -0.28
SCAF4-201ENST00000286835 RAB2BQ8WUD1 216 aa13.27□□□□□ -0.28
SCAF4-201ENST00000286835 KCTD13Q8WZ19 329 aa13.27□□□□□ -0.28
SCAF4-201ENST00000286835 CEP19Q96LK0 163 aa13.27□□□□□ -0.28
SCAF4-201ENST00000286835 NODALQ96S42 347 aa13.27□□□□□ -0.28
SCAF4-201ENST00000286835 EPS8L2Q9H6S3 715 aa13.27□□□□□ -0.28
SCAF4-201ENST00000286835 SACM1LQ9NTJ5 587 aa13.27□□□□□ -0.28
SCAF4-201ENST00000286835 FAM105AQ9NUU6 356 aa13.27□□□□□ -0.28
SCAF4-201ENST00000286835 GJD2Q9UKL4 321 aa13.27□□□□□ -0.28
SCAF4-201ENST00000286835 ANKRD31Q8N7Z5 1873 aa13.27□□□□□ -0.28
SCAF4-201ENST00000286835 C2orf81A6NN90 581 aa13.27□□□□□ -0.29
SCAF4-201ENST00000286835 H0YJX3 145 aa13.27□□□□□ -0.29
SCAF4-201ENST00000286835 CBX4O00257 560 aa13.27□□□□□ -0.29
SCAF4-201ENST00000286835 SH3BP5O60239 455 aa13.27□□□□□ -0.29
SCAF4-201ENST00000286835 FAM20BO75063 409 aa13.27□□□□□ -0.29
SCAF4-201ENST00000286835 CLPXO76031 633 aa13.27□□□□□ -0.29
SCAF4-201ENST00000286835 ALDH2P05091 517 aa13.27□□□□□ -0.29
SCAF4-201ENST00000286835 IRF1P10914 325 aa13.27□□□□□ -0.29
SCAF4-201ENST00000286835 ARNTP27540 789 aa13.27□□□□□ -0.29
SCAF4-201ENST00000286835 FMO3P31513 532 aa13.27□□□□□ -0.29
SCAF4-201ENST00000286835 ARCN1P48444 511 aaKnown RBP13.27□□□□□ -0.29
SCAF4-201ENST00000286835 HCAR3P49019 387 aa13.27□□□□□ -0.29
SCAF4-201ENST00000286835 ARSFP54793 590 aa13.27□□□□□ -0.29
SCAF4-201ENST00000286835 DAG1Q14118 895 aa13.27□□□□□ -0.29
SCAF4-201ENST00000286835 ANKRD46Q86W74 232 aa13.27□□□□□ -0.29
SCAF4-201ENST00000286835 HORMAD1Q86X24 394 aa13.27□□□□□ -0.29
SCAF4-201ENST00000286835 EPHX4Q8IUS5 362 aa13.27□□□□□ -0.29
SCAF4-201ENST00000286835 ZUFSPQ96AP4 578 aa13.27□□□□□ -0.29
SCAF4-201ENST00000286835 MYRFLQ96LU7 910 aa13.27□□□□□ -0.29
SCAF4-201ENST00000286835 TMEM209Q96SK2 561 aa13.27□□□□□ -0.29
SCAF4-201ENST00000286835 HERC2P3Q9BVR0 1158 aa13.27□□□□□ -0.29
SCAF4-201ENST00000286835 CINPQ9BW66 212 aaPredicted RBP13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms