RNA–Protein interactions for RNA: ENST00000286398.11

SMC2-201, Transcript of structural maintenance of chromosomes 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC2, Length 5,992 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC2-201ENST00000286398 PRAMEF18Q5VWM3 479 aa9.03□□□□□ -0.96
SMC2-201ENST00000286398 C16orf59Q7L2K0 433 aa9.03□□□□□ -0.96
SMC2-201ENST00000286398 OTOP1Q7RTM1 612 aa9.03□□□□□ -0.96
SMC2-201ENST00000286398 CFAP206Q8IYR0 622 aa9.03□□□□□ -0.96
SMC2-201ENST00000286398 C11orf65Q8NCR3 313 aa9.03□□□□□ -0.96
SMC2-201ENST00000286398 TMEM161BQ8NDZ6 487 aa9.03□□□□□ -0.96
SMC2-201ENST00000286398 TWIST2Q8WVJ9 160 aa9.03□□□□□ -0.96
SMC2-201ENST00000286398 SEC14L1Q92503 715 aa9.03□□□□□ -0.96
SMC2-201ENST00000286398 MCMBPQ9BTE3 642 aa9.03□□□□□ -0.96
SMC2-201ENST00000286398 TMEM109Q9BVC6 243 aa9.03□□□□□ -0.96
SMC2-201ENST00000286398 DCSTAMPQ9H295 470 aa9.03□□□□□ -0.96
SMC2-201ENST00000286398 C3orf14Q9HBI5 128 aa9.03□□□□□ -0.96
SMC2-201ENST00000286398 KIAA0556O60303 1618 aa9.02□□□□□ -0.96
SMC2-201ENST00000286398 KRT33AO76009 404 aa9.02□□□□□ -0.96
SMC2-201ENST00000286398 GOT1P17174 413 aa9.02□□□□□ -0.96
SMC2-201ENST00000286398 LPOP22079 712 aaPredicted RBP9.02□□□□□ -0.96
SMC2-201ENST00000286398 DNASE1L3Q13609 305 aa9.02□□□□□ -0.96
SMC2-201ENST00000286398 TIGD6Q17RP2 521 aa9.02□□□□□ -0.96
SMC2-201ENST00000286398 PPP1R26Q5T8A7 1209 aaPredicted RBP9.02□□□□□ -0.96
SMC2-201ENST00000286398 IL23RQ5VWK5 629 aa9.02□□□□□ -0.96
SMC2-201ENST00000286398 ASB18Q6ZVZ8 466 aa9.02□□□□□ -0.96
SMC2-201ENST00000286398 PHF13Q86YI8 300 aaPredicted RBP9.02□□□□□ -0.96
SMC2-201ENST00000286398 UFD1Q92890 307 aa9.02□□□□□ -0.96
SMC2-201ENST00000286398 SLC38A4Q969I6 547 aa9.02□□□□□ -0.96
SMC2-201ENST00000286398 C2orf49Q9BVC5 232 aaPredicted RBP9.02□□□□□ -0.96
SMC2-201ENST00000286398 ABCC13Q9NSE7 274 aa9.02□□□□□ -0.96
SMC2-201ENST00000286398 NDUFAF4Q9P032 175 aa9.02□□□□□ -0.96
SMC2-201ENST00000286398 SPATA7Q9P0W8 599 aa9.02□□□□□ -0.96
SMC2-201ENST00000286398 TIMM22Q9Y584 194 aa9.02□□□□□ -0.96
SMC2-201ENST00000286398 BAZ2BQ9UIF8 2168 aaKnown RBP9.02□□□□□ -0.96
SMC2-201ENST00000286398 NLRP1Q9C000 1473 aa9.02□□□□□ -0.96
SMC2-201ENST00000286398 FXYD6-FXYD2A0A087WZ82 144 aa9.02□□□□□ -0.97
SMC2-201ENST00000286398 TMEM150BA6NC51 233 aa9.02□□□□□ -0.97
SMC2-201ENST00000286398 RIIAD1A6NNX1 92 aa9.02□□□□□ -0.97
SMC2-201ENST00000286398 H0YJX3 145 aa9.02□□□□□ -0.97
SMC2-201ENST00000286398 H3BSA7 217 aa9.02□□□□□ -0.97
SMC2-201ENST00000286398 L7N2F9 121 aa9.02□□□□□ -0.97
SMC2-201ENST00000286398 EI24O14681 340 aa9.02□□□□□ -0.97
SMC2-201ENST00000286398 HOXA2O43364 376 aa9.02□□□□□ -0.97
SMC2-201ENST00000286398 PLATP00750 562 aa9.02□□□□□ -0.97
SMC2-201ENST00000286398 CKBP12277 381 aa9.02□□□□□ -0.97
SMC2-201ENST00000286398 GADD45AP24522 165 aa9.02□□□□□ -0.97
SMC2-201ENST00000286398 STOMP27105 288 aa9.02□□□□□ -0.97
SMC2-201ENST00000286398 SLC12A3P55017 1021 aa9.02□□□□□ -0.97
SMC2-201ENST00000286398 MLLT6P55198 1093 aaPredicted RBP9.02□□□□□ -0.97
SMC2-201ENST00000286398 CDH12P55289 794 aa9.02□□□□□ -0.97
SMC2-201ENST00000286398 GNG2P59768 71 aa9.02□□□□□ -0.97
SMC2-201ENST00000286398 CSTF1Q05048 431 aaKnown RBP9.02□□□□□ -0.97
SMC2-201ENST00000286398 TMEM53Q6P2H8 277 aa9.02□□□□□ -0.97
SMC2-201ENST00000286398 METTL7BQ6UX53 244 aa9.02□□□□□ -0.97
SMC2-201ENST00000286398 PIGWQ7Z7B1 504 aa9.02□□□□□ -0.97
SMC2-201ENST00000286398 FAM35AQ86V20 835 aa9.02□□□□□ -0.97
SMC2-201ENST00000286398 OXR1Q8N573 874 aa9.02□□□□□ -0.97
SMC2-201ENST00000286398 ZNF548Q8NEK5 533 aaPredicted RBP9.02□□□□□ -0.97
SMC2-201ENST00000286398 BPIFB1Q8TDL5 484 aa9.02□□□□□ -0.97
SMC2-201ENST00000286398 GTPBP3Q969Y2 492 aaKnown RBP9.02□□□□□ -0.97
SMC2-201ENST00000286398 HSFY1Q96LI6 401 aa9.02□□□□□ -0.97
SMC2-201ENST00000286398 ZNF570Q96NI8 536 aa9.02□□□□□ -0.97
SMC2-201ENST00000286398 FXYD6Q9H0Q3 95 aa9.02□□□□□ -0.97
SMC2-201ENST00000286398 PXMP2Q9NR77 195 aa9.02□□□□□ -0.97
SMC2-201ENST00000286398 KCTD5Q9NXV2 234 aa9.02□□□□□ -0.97
SMC2-201ENST00000286398 GULP1Q9UBP9 304 aa9.02□□□□□ -0.97
SMC2-201ENST00000286398 KCNIP3Q9Y2W7 256 aa9.02□□□□□ -0.97
SMC2-201ENST00000286398 MEMO1Q9Y316 297 aa9.02□□□□□ -0.97
SMC2-201ENST00000286398 ILVBLA1L0T0 632 aa9.02□□□□□ -0.97
SMC2-201ENST00000286398 FOXO6A8MYZ6 492 aa9.02□□□□□ -0.97
SMC2-201ENST00000286398 ACADMP11310 421 aa9.02□□□□□ -0.97
SMC2-201ENST00000286398 SRCP12931 536 aa9.02□□□□□ -0.97
SMC2-201ENST00000286398 LAMP2P13473 410 aa9.02□□□□□ -0.97
SMC2-201ENST00000286398 CKMT2P17540 419 aa9.02□□□□□ -0.97
SMC2-201ENST00000286398 ZNF45Q02386 682 aa9.02□□□□□ -0.97
SMC2-201ENST00000286398 PLEKHG6Q3KR16 790 aa9.02□□□□□ -0.97
SMC2-201ENST00000286398 SLC27A1Q6PCB7 646 aa9.02□□□□□ -0.97
SMC2-201ENST00000286398 IRF2BP2Q7Z5L9 587 aa9.02□□□□□ -0.97
SMC2-201ENST00000286398 COMTD1Q86VU5 262 aa9.02□□□□□ -0.97
SMC2-201ENST00000286398 ZDHHC21Q8IVQ6 265 aa9.02□□□□□ -0.97
SMC2-201ENST00000286398 UBR7Q8N806 425 aa9.02□□□□□ -0.97
SMC2-201ENST00000286398 OR4L1Q8NH43 312 aa9.02□□□□□ -0.97
SMC2-201ENST00000286398 ZNF431Q8TF32 576 aaPredicted RBP9.02□□□□□ -0.97
SMC2-201ENST00000286398 GAL3ST1Q99999 423 aa9.02□□□□□ -0.97
SMC2-201ENST00000286398 GTPBP2Q9BX10 602 aaKnown RBP9.02□□□□□ -0.97
SMC2-201ENST00000286398 AMBNQ9NP70 447 aa9.02□□□□□ -0.97
SMC2-201ENST00000286398 RNF181Q9P0P0 153 aa9.02□□□□□ -0.97
SMC2-201ENST00000286398 SUCOQ9UBS9 1254 aaKnown RBP9.02□□□□□ -0.97
SMC2-201ENST00000286398 ZNF490Q9ULM2 529 aaPredicted RBP9.02□□□□□ -0.97
SMC2-201ENST00000286398 TESMINQ9Y4I5 508 aa9.02□□□□□ -0.97
SMC2-201ENST00000286398 GATBO75879 557 aaKnown RBP9.02□□□□□ -0.97
SMC2-201ENST00000286398 C8BP07358 591 aa9.02□□□□□ -0.97
SMC2-201ENST00000286398 SPARCP09486 303 aa9.02□□□□□ -0.97
SMC2-201ENST00000286398 HSD3B1P14060 373 aa9.02□□□□□ -0.97
SMC2-201ENST00000286398 INSRRP14616 1297 aa9.02□□□□□ -0.97
SMC2-201ENST00000286398 NOMO3P69849 1222 aa9.02□□□□□ -0.97
SMC2-201ENST00000286398 ABRQ12979 859 aa9.02□□□□□ -0.97
SMC2-201ENST00000286398 RPA4Q13156 261 aa9.02□□□□□ -0.97
SMC2-201ENST00000286398 NIPAL1Q6NVV3 410 aa9.02□□□□□ -0.97
SMC2-201ENST00000286398 SNX20Q7Z614 316 aa9.02□□□□□ -0.97
SMC2-201ENST00000286398 ITIH5Q86UX2 942 aa9.02□□□□□ -0.97
SMC2-201ENST00000286398 RASGEF1CQ8N431 466 aa9.02□□□□□ -0.97
SMC2-201ENST00000286398 TLCD1Q96CP7 247 aa9.02□□□□□ -0.97
SMC2-201ENST00000286398 CDADC1Q9BWV3 514 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms