RNA–Protein interactions for RNA: ENST00000286349.3

TRIM42-201, Transcript of tripartite motif containing 42, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM42, Length 2,539 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM42-201ENST00000286349 GSTA3Q16772 222 aa7.53□□□□□ -1.2
TRIM42-201ENST00000286349 C16orf46Q6P387 395 aa7.53□□□□□ -1.2
TRIM42-201ENST00000286349 MAMDC2Q7Z304 686 aaPredicted RBP7.53□□□□□ -1.2
TRIM42-201ENST00000286349 TFAP2DQ7Z6R9 452 aa7.53□□□□□ -1.2
TRIM42-201ENST00000286349 RNF135Q8IUD6 432 aa7.53□□□□□ -1.2
TRIM42-201ENST00000286349 MMAAQ8IVH4 418 aaKnown RBP7.53□□□□□ -1.2
TRIM42-201ENST00000286349 C10orf107Q8IVU9 208 aa7.53□□□□□ -1.2
TRIM42-201ENST00000286349 CPSF7Q8N684 471 aaKnown RBP7.53□□□□□ -1.2
TRIM42-201ENST00000286349 TTC9BQ8N6N2 239 aa7.53□□□□□ -1.2
TRIM42-201ENST00000286349 OR6Y1Q8NGX8 325 aa7.53□□□□□ -1.2
TRIM42-201ENST00000286349 SLC7A6OSQ96CW6 309 aaPredicted RBP7.53□□□□□ -1.2
TRIM42-201ENST00000286349 PABPC5Q96DU9 382 aaKnown RBP7.53□□□□□ -1.2
TRIM42-201ENST00000286349 TSPAN17Q96FV3 270 aa7.53□□□□□ -1.2
TRIM42-201ENST00000286349 BTBD10Q9BSF8 475 aa7.53□□□□□ -1.2
TRIM42-201ENST00000286349 EPB41L1Q9H4G0 881 aa7.53□□□□□ -1.2
TRIM42-201ENST00000286349 PALMDQ9NP74 551 aa7.53□□□□□ -1.2
TRIM42-201ENST00000286349 POLE3Q9NRF9 147 aa7.53□□□□□ -1.2
TRIM42-201ENST00000286349 ZNF212Q9UDV6 495 aa7.53□□□□□ -1.2
TRIM42-201ENST00000286349 ZNHIT2Q9UHR6 403 aa7.53□□□□□ -1.2
TRIM42-201ENST00000286349 SLC39A10Q9ULF5 831 aa7.53□□□□□ -1.2
TRIM42-201ENST00000286349 TBC1D30Q9Y2I9 924 aa7.53□□□□□ -1.2
TRIM42-201ENST00000286349 ACOT9Q9Y305 439 aa7.53□□□□□ -1.2
TRIM42-201ENST00000286349 STON1Q9Y6Q2 735 aa7.53□□□□□ -1.2
TRIM42-201ENST00000286349 VWA8A3KMH1 1905 aa7.53□□□□□ -1.2
TRIM42-201ENST00000286349 MYO18AQ92614 2054 aaKnown RBP7.53□□□□□ -1.2
TRIM42-201ENST00000286349 SH3PXD2BA1X283 911 aa7.52□□□□□ -1.21
TRIM42-201ENST00000286349 PALM2-AKAP2B1ALY0 433 aaPredicted RBP7.52□□□□□ -1.21
TRIM42-201ENST00000286349 FCHO1O14526 889 aa7.52□□□□□ -1.21
TRIM42-201ENST00000286349 SLC7A4O43246 635 aa7.52□□□□□ -1.21
TRIM42-201ENST00000286349 PEX1O43933 1283 aa7.52□□□□□ -1.21
TRIM42-201ENST00000286349 CLDN11O75508 207 aa7.52□□□□□ -1.21
TRIM42-201ENST00000286349 CNTN5O94779 1100 aa7.52□□□□□ -1.21
TRIM42-201ENST00000286349 VAPBO95292 243 aa7.52□□□□□ -1.21
TRIM42-201ENST00000286349 FGF1P05230 155 aa7.52□□□□□ -1.21
TRIM42-201ENST00000286349 GSTM1P09488 218 aa7.52□□□□□ -1.21
TRIM42-201ENST00000286349 SPATA31D3P0C874 917 aa7.52□□□□□ -1.21
TRIM42-201ENST00000286349 SERPINB5P36952 375 aa7.52□□□□□ -1.21
TRIM42-201ENST00000286349 IST1P53990 364 aa7.52□□□□□ -1.21
TRIM42-201ENST00000286349 RAB10P61026 200 aa7.52□□□□□ -1.21
TRIM42-201ENST00000286349 CDC20Q12834 499 aa7.52□□□□□ -1.21
TRIM42-201ENST00000286349 ZNF235Q14590 738 aa7.52□□□□□ -1.21
TRIM42-201ENST00000286349 GRM3Q14832 879 aa7.52□□□□□ -1.21
TRIM42-201ENST00000286349 GRIN2CQ14957 1233 aa7.52□□□□□ -1.21
TRIM42-201ENST00000286349 KPNB1Q14974 876 aaKnown RBP7.52□□□□□ -1.21
TRIM42-201ENST00000286349 SF3B4Q15427 424 aaKnown RBP eCLIP7.52□□□□□ -1.21
TRIM42-201ENST00000286349 TAF12Q16514 161 aa7.52□□□□□ -1.21
TRIM42-201ENST00000286349 PHKG1Q16816 387 aa7.52□□□□□ -1.21
TRIM42-201ENST00000286349 LIN52Q52LA3 116 aa7.52□□□□□ -1.21
TRIM42-201ENST00000286349 PPM1JQ5JR12 505 aa7.52□□□□□ -1.21
TRIM42-201ENST00000286349 WASHC2DQ5SRD0 308 aa7.52□□□□□ -1.21
TRIM42-201ENST00000286349 HECTD3Q5T447 861 aa7.52□□□□□ -1.21
TRIM42-201ENST00000286349 TSTD2Q5T7W7 516 aa7.52□□□□□ -1.21
TRIM42-201ENST00000286349 ALG1LQ6GMV1 187 aa7.52□□□□□ -1.21
TRIM42-201ENST00000286349 ZYG11AQ6WRX3 759 aa7.52□□□□□ -1.21
TRIM42-201ENST00000286349 SPATA31D4Q6ZUB0 917 aa7.52□□□□□ -1.21
TRIM42-201ENST00000286349 CHST9Q7L1S5 443 aa7.52□□□□□ -1.21
TRIM42-201ENST00000286349 CMC1Q7Z7K0 106 aa7.52□□□□□ -1.21
TRIM42-201ENST00000286349 MRPL43Q8N983 215 aaKnown RBP7.52□□□□□ -1.21
TRIM42-201ENST00000286349 GALNT11Q8NCW6 608 aa7.52□□□□□ -1.21
TRIM42-201ENST00000286349 GPR152Q8TDT2 470 aa7.52□□□□□ -1.21
TRIM42-201ENST00000286349 GAB3Q8WWW8 586 aa7.52□□□□□ -1.21
TRIM42-201ENST00000286349 IGSF8Q969P0 613 aa7.52□□□□□ -1.21
TRIM42-201ENST00000286349 PSMG2Q969U7 264 aa7.52□□□□□ -1.21
TRIM42-201ENST00000286349 PTCD3Q96EY7 689 aaKnown RBP7.52□□□□□ -1.21
TRIM42-201ENST00000286349 TRMT2BQ96GJ1 504 aaKnown RBP7.52□□□□□ -1.21
TRIM42-201ENST00000286349 FEM1CQ96JP0 617 aa7.52□□□□□ -1.21
TRIM42-201ENST00000286349 MYRFLQ96LU7 910 aa7.52□□□□□ -1.21
TRIM42-201ENST00000286349 RILPQ96NA2 401 aa7.52□□□□□ -1.21
TRIM42-201ENST00000286349 SP140LQ9H930 580 aa7.52□□□□□ -1.21
TRIM42-201ENST00000286349 CRLF2Q9HC73 371 aa7.52□□□□□ -1.21
TRIM42-201ENST00000286349 UXTQ9UBK9 157 aaPredicted RBP7.52□□□□□ -1.21
TRIM42-201ENST00000286349 ATP6V1HQ9UI12 483 aa7.52□□□□□ -1.21
TRIM42-201ENST00000286349 REV3LO60673 3130 aa7.52□□□□□ -1.21
TRIM42-201ENST00000286349 SMIM31A0A1B0GVY4 71 aa7.52□□□□□ -1.21
TRIM42-201ENST00000286349 LOC285095A0A1B0GVY8 99 aa7.52□□□□□ -1.21
TRIM42-201ENST00000286349 FAM95CA0A1B0GW59 222 aa7.52□□□□□ -1.21
TRIM42-201ENST00000286349 C2orf71A6NGG8 1288 aa7.52□□□□□ -1.21
TRIM42-201ENST00000286349 A8MX80 341 aa7.52□□□□□ -1.21
TRIM42-201ENST00000286349 SLCO1B7G3V0H7 640 aa7.52□□□□□ -1.21
TRIM42-201ENST00000286349 H3BUI4 141 aa7.52□□□□□ -1.21
TRIM42-201ENST00000286349 J3KR12 359 aa7.52□□□□□ -1.21
TRIM42-201ENST00000286349 HOXC11O43248 304 aaPredicted RBP7.52□□□□□ -1.21
TRIM42-201ENST00000286349 CBX6O95503 412 aa7.52□□□□□ -1.21
TRIM42-201ENST00000286349 LATS1O95835 1130 aa7.52□□□□□ -1.21
TRIM42-201ENST00000286349 TBX18O95935 607 aa7.52□□□□□ -1.21
TRIM42-201ENST00000286349 AHSGP02765 367 aa7.52□□□□□ -1.21
TRIM42-201ENST00000286349 PRKCGP05129 697 aa7.52□□□□□ -1.21
TRIM42-201ENST00000286349 CNPP09543 421 aaKnown RBP7.52□□□□□ -1.21
TRIM42-201ENST00000286349 ADSLP30566 484 aaPredicted RBP7.52□□□□□ -1.21
TRIM42-201ENST00000286349 SOX6P35712 828 aa7.52□□□□□ -1.21
TRIM42-201ENST00000286349 CLCN5P51795 746 aa7.52□□□□□ -1.21
TRIM42-201ENST00000286349 IRX4P78413 519 aa7.52□□□□□ -1.21
TRIM42-201ENST00000286349 SLC10A7Q0GE19 358 aa7.52□□□□□ -1.21
TRIM42-201ENST00000286349 ADGRE1Q14246 886 aa7.52□□□□□ -1.21
TRIM42-201ENST00000286349 VEPH1Q14D04 833 aa7.52□□□□□ -1.21
TRIM42-201ENST00000286349 LIPMQ5VYY2 423 aa7.52□□□□□ -1.21
TRIM42-201ENST00000286349 ESRP1Q6NXG1 681 aaKnown RBP7.52□□□□□ -1.21
TRIM42-201ENST00000286349 KLHL35Q6PF15 583 aa7.52□□□□□ -1.21
TRIM42-201ENST00000286349 KCTD20Q7Z5Y7 419 aa7.52□□□□□ -1.21
TRIM42-201ENST00000286349 SETD3Q86TU7 594 aaPredicted RBP7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms