RNA–Protein interactions for RNA: ENST00000268607.9

MAP1LC3B-201, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MAP1LC3B, Length 2,688 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-201ENST00000268607 HDAC10Q969S8 669 aa15.83■□□□□ 0.13
MAP1LC3B-201ENST00000268607 CENPNQ96H22 339 aaPredicted RBP15.83■□□□□ 0.13
MAP1LC3B-201ENST00000268607 SEZ6LQ9BYH1 1024 aa15.83■□□□□ 0.13
MAP1LC3B-201ENST00000268607 CYP4F12Q9HCS2 524 aa15.83■□□□□ 0.13
MAP1LC3B-201ENST00000268607 ABCC13Q9NSE7 274 aa15.83■□□□□ 0.13
MAP1LC3B-201ENST00000268607 MTPAPQ9NVV4 582 aaKnown RBP eCLIP15.83■□□□□ 0.13
MAP1LC3B-201ENST00000268607 NME4O00746 187 aa15.83■□□□□ 0.12
MAP1LC3B-201ENST00000268607 PMPCBO75439 489 aa15.83■□□□□ 0.12
MAP1LC3B-201ENST00000268607 PSMA4P25789 261 aaKnown RBP15.83■□□□□ 0.12
MAP1LC3B-201ENST00000268607 EEF1DP29692 281 aaKnown RBP15.83■□□□□ 0.12
MAP1LC3B-201ENST00000268607 CCR1P32246 355 aa15.83■□□□□ 0.12
MAP1LC3B-201ENST00000268607 SOX11P35716 441 aa15.83■□□□□ 0.12
MAP1LC3B-201ENST00000268607 HLCSP50747 726 aa15.83■□□□□ 0.12
MAP1LC3B-201ENST00000268607 YBX1P67809 324 aaKnown RBP15.83■□□□□ 0.12
MAP1LC3B-201ENST00000268607 UTS2BQ765I0 119 aa15.83■□□□□ 0.12
MAP1LC3B-201ENST00000268607 RETREG3Q86VR2 466 aa15.83■□□□□ 0.12
MAP1LC3B-201ENST00000268607 CEP97Q8IW35 865 aa15.83■□□□□ 0.12
MAP1LC3B-201ENST00000268607 DDIASQ8IXT1 998 aa15.83■□□□□ 0.12
MAP1LC3B-201ENST00000268607 PEX5LQ8IYB4 626 aa15.83■□□□□ 0.12
MAP1LC3B-201ENST00000268607 SIX5Q8N196 739 aa15.83■□□□□ 0.12
MAP1LC3B-201ENST00000268607 PNPLA1Q8N8W4 532 aa15.83■□□□□ 0.12
MAP1LC3B-201ENST00000268607 LILRB4Q8NHJ6 448 aa15.83■□□□□ 0.12
MAP1LC3B-201ENST00000268607 BADQ92934 168 aa15.83■□□□□ 0.12
MAP1LC3B-201ENST00000268607 TUBA1CQ9BQE3 449 aa15.83■□□□□ 0.12
MAP1LC3B-201ENST00000268607 TRIM8Q9BZR9 551 aa15.83■□□□□ 0.12
MAP1LC3B-201ENST00000268607 FBRSL1Q9HCM7 1045 aaKnown RBP15.83■□□□□ 0.12
MAP1LC3B-201ENST00000268607 CD320Q9NPF0 282 aa15.83■□□□□ 0.12
MAP1LC3B-201ENST00000268607 POLE4Q9NR33 117 aa15.83■□□□□ 0.12
MAP1LC3B-201ENST00000268607 SMPD3Q9NY59 655 aaPredicted RBP15.83■□□□□ 0.12
MAP1LC3B-201ENST00000268607 PSME2Q9UL46 239 aa15.83■□□□□ 0.12
MAP1LC3B-201ENST00000268607 ACOT9Q9Y305 439 aa15.83■□□□□ 0.12
MAP1LC3B-201ENST00000268607 MICAL3Q7RTP6 2002 aa15.82■□□□□ 0.12
MAP1LC3B-201ENST00000268607 TIMP1P01033 207 aa15.82■□□□□ 0.12
MAP1LC3B-201ENST00000268607 IGLV3-25P01717 112 aa15.82■□□□□ 0.12
MAP1LC3B-201ENST00000268607 TGM1P22735 817 aa15.82■□□□□ 0.12
MAP1LC3B-201ENST00000268607 INPP5AQ14642 412 aa15.82■□□□□ 0.12
MAP1LC3B-201ENST00000268607 GIPC2Q8TF65 315 aa15.82■□□□□ 0.12
MAP1LC3B-201ENST00000268607 SEPT5Q99719 369 aaPredicted RBP15.82■□□□□ 0.12
MAP1LC3B-201ENST00000268607 TP63Q9H3D4 680 aaPredicted RBP15.82■□□□□ 0.12
MAP1LC3B-201ENST00000268607 RAD21L1Q9H4I0 556 aa15.82■□□□□ 0.12
MAP1LC3B-201ENST00000268607 TRHDEQ9UKU6 1024 aa15.82■□□□□ 0.12
MAP1LC3B-201ENST00000268607 PRRC2BQ5JSZ5 2229 aaKnown RBP15.82■□□□□ 0.12
MAP1LC3B-201ENST00000268607 NPHS1O60500 1241 aa15.82■□□□□ 0.12
MAP1LC3B-201ENST00000268607 CPNE6O95741 557 aa15.82■□□□□ 0.12
MAP1LC3B-201ENST00000268607 DUSP4Q13115 394 aa15.82■□□□□ 0.12
MAP1LC3B-201ENST00000268607 MAPRE1Q15691 268 aaKnown RBP15.82■□□□□ 0.12
MAP1LC3B-201ENST00000268607 IRAK1BP1Q5VVH5 260 aa15.82■□□□□ 0.12
MAP1LC3B-201ENST00000268607 SPRED1Q7Z699 444 aa15.82■□□□□ 0.12
MAP1LC3B-201ENST00000268607 ANKRD13BQ86YJ7 626 aa15.82■□□□□ 0.12
MAP1LC3B-201ENST00000268607 CALML6Q8TD86 181 aa15.82■□□□□ 0.12
MAP1LC3B-201ENST00000268607 DPF3Q92784 378 aa15.82■□□□□ 0.12
MAP1LC3B-201ENST00000268607 UROC1Q96N76 676 aa15.82■□□□□ 0.12
MAP1LC3B-201ENST00000268607 GPR78Q96P69 363 aa15.82■□□□□ 0.12
MAP1LC3B-201ENST00000268607 LHPPQ9H008 270 aa15.82■□□□□ 0.12
MAP1LC3B-201ENST00000268607 PCDHB8Q9UN66 801 aa15.82■□□□□ 0.12
MAP1LC3B-201ENST00000268607 HS3ST4Q9Y661 456 aa15.82■□□□□ 0.12
MAP1LC3B-201ENST00000268607 TTC24A2A3L6 582 aaPredicted RBP15.81■□□□□ 0.12
MAP1LC3B-201ENST00000268607 TOR1BO14657 336 aa15.81■□□□□ 0.12
MAP1LC3B-201ENST00000268607 AHSGP02765 367 aa15.81■□□□□ 0.12
MAP1LC3B-201ENST00000268607 MT-ND1P03886 318 aa15.81■□□□□ 0.12
MAP1LC3B-201ENST00000268607 HMBSP08397 361 aa15.81■□□□□ 0.12
MAP1LC3B-201ENST00000268607 CHRNB1P11230 501 aa15.81■□□□□ 0.12
MAP1LC3B-201ENST00000268607 CHRNA4P43681 627 aa15.81■□□□□ 0.12
MAP1LC3B-201ENST00000268607 CAPRIN1Q14444 709 aaKnown RBP15.81■□□□□ 0.12
MAP1LC3B-201ENST00000268607 ZNF846Q147U1 533 aa15.81■□□□□ 0.12
MAP1LC3B-201ENST00000268607 ZUFSPQ96AP4 578 aa15.81■□□□□ 0.12
MAP1LC3B-201ENST00000268607 RHOJQ9H4E5 214 aa15.81■□□□□ 0.12
MAP1LC3B-201ENST00000268607 MEAF6Q9HAF1 191 aa15.81■□□□□ 0.12
MAP1LC3B-201ENST00000268607 SCUBE2Q9NQ36 999 aa15.81■□□□□ 0.12
MAP1LC3B-201ENST00000268607 FNDC1Q4ZHG4 1894 aaPredicted RBP15.81■□□□□ 0.12
MAP1LC3B-201ENST00000268607 C9JVG2 144 aa15.81■□□□□ 0.12
MAP1LC3B-201ENST00000268607 MTSS1O43312 755 aa15.81■□□□□ 0.12
MAP1LC3B-201ENST00000268607 SYNCRIPO60506 623 aaKnown RBP15.81■□□□□ 0.12
MAP1LC3B-201ENST00000268607 MAFKO60675 156 aa15.81■□□□□ 0.12
MAP1LC3B-201ENST00000268607 SEC14L2O76054 403 aa15.81■□□□□ 0.12
MAP1LC3B-201ENST00000268607 ALOX5P09917 674 aa15.81■□□□□ 0.12
MAP1LC3B-201ENST00000268607 MBL2P11226 248 aaPredicted RBP15.81■□□□□ 0.12
MAP1LC3B-201ENST00000268607 ENDOUP21128 410 aaKnown RBP15.81■□□□□ 0.12
MAP1LC3B-201ENST00000268607 WDR5P61964 334 aaKnown RBP15.81■□□□□ 0.12
MAP1LC3B-201ENST00000268607 EIF4EBP2Q13542 120 aaPredicted RBP15.81■□□□□ 0.12
MAP1LC3B-201ENST00000268607 PCSK7Q16549 785 aa15.81■□□□□ 0.12
MAP1LC3B-201ENST00000268607 CCNYL2Q5T2Q4 361 aa15.81■□□□□ 0.12
MAP1LC3B-201ENST00000268607 TMTC4Q5T4D3 741 aa15.81■□□□□ 0.12
MAP1LC3B-201ENST00000268607 MIB1Q86YT6 1006 aa15.81■□□□□ 0.12
MAP1LC3B-201ENST00000268607 FUNDC1Q8IVP5 155 aa15.81■□□□□ 0.12
MAP1LC3B-201ENST00000268607 MFSD6LQ8IWD5 586 aa15.81■□□□□ 0.12
MAP1LC3B-201ENST00000268607 TTC16Q8NEE8 873 aa15.81■□□□□ 0.12
MAP1LC3B-201ENST00000268607 SLC45A3Q96JT2 553 aa15.81■□□□□ 0.12
MAP1LC3B-201ENST00000268607 FICDQ9BVA6 458 aa15.81■□□□□ 0.12
MAP1LC3B-201ENST00000268607 RNF38Q9H0F5 515 aa15.81■□□□□ 0.12
MAP1LC3B-201ENST00000268607 CWH43Q9H720 699 aa15.81■□□□□ 0.12
MAP1LC3B-201ENST00000268607 ELAC1Q9H777 363 aaKnown RBP15.81■□□□□ 0.12
MAP1LC3B-201ENST00000268607 RBM22Q9NW64 420 aaKnown RBP eCLIP15.81■□□□□ 0.12
MAP1LC3B-201ENST00000268607 MTF2Q9Y483 593 aaPredicted RBP15.81■□□□□ 0.12
MAP1LC3B-201ENST00000268607 RAD54BQ9Y620 910 aa15.81■□□□□ 0.12
MAP1LC3B-201ENST00000268607 AQP12BA6NM10 295 aa15.81■□□□□ 0.12
MAP1LC3B-201ENST00000268607 E9PAM4 449 aa15.81■□□□□ 0.12
MAP1LC3B-201ENST00000268607 INPPL1O15357 1258 aa15.81■□□□□ 0.12
MAP1LC3B-201ENST00000268607 BMPR1AP36894 532 aa15.81■□□□□ 0.12
MAP1LC3B-201ENST00000268607 RPS9P46781 194 aaKnown RBP15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms