RNA–Protein interactions for RNA: ENST00000266880.11

CHFR-201, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2 BASIC

Gene CHFR, Length 11,133 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-201ENST00000266880 PCDHGA11Q9Y5H2 935 aa11.09□□□□□ -0.63
CHFR-201ENST00000266880 C9JVG2 144 aa11.09□□□□□ -0.63
CHFR-201ENST00000266880 AVILO75366 819 aa11.09□□□□□ -0.63
CHFR-201ENST00000266880 POU2F1P14859 743 aa11.09□□□□□ -0.63
CHFR-201ENST00000266880 ZNF155Q12901 538 aaPredicted RBP11.09□□□□□ -0.63
CHFR-201ENST00000266880 STK11Q15831 433 aa11.09□□□□□ -0.63
CHFR-201ENST00000266880 SEC14L3Q9UDX4 400 aa11.09□□□□□ -0.63
CHFR-201ENST00000266880 TRAV6A0A075B6T7 132 aa11.09□□□□□ -0.63
CHFR-201ENST00000266880 CATP04040 527 aaKnown RBP11.09□□□□□ -0.63
CHFR-201ENST00000266880 DDX6P26196 483 aaKnown RBP eCLIP11.09□□□□□ -0.63
CHFR-201ENST00000266880 TMIEQ8NEW7 156 aa11.09□□□□□ -0.63
CHFR-201ENST00000266880 NXF3Q9H4D5 531 aaKnown RBP11.09□□□□□ -0.63
CHFR-201ENST00000266880 NDUFAF4Q9P032 175 aa11.09□□□□□ -0.63
CHFR-201ENST00000266880 KLF15Q9UIH9 416 aa11.09□□□□□ -0.63
CHFR-201ENST00000266880 ADGRL3Q9HAR2 1447 aa11.08□□□□□ -0.63
CHFR-201ENST00000266880 ZNF99A8MXY4 864 aaPredicted RBP11.08□□□□□ -0.63
CHFR-201ENST00000266880 ADGRE1Q14246 886 aa11.08□□□□□ -0.63
CHFR-201ENST00000266880 ATXN7L3Q14CW9 347 aaPredicted RBP11.08□□□□□ -0.63
CHFR-201ENST00000266880 ZCCHC12Q6PEW1 402 aa11.08□□□□□ -0.63
CHFR-201ENST00000266880 USP45Q70EL2 814 aa11.08□□□□□ -0.63
CHFR-201ENST00000266880 RBM15BQ8NDT2 890 aaKnown RBP11.08□□□□□ -0.63
CHFR-201ENST00000266880 TAS2R14Q9NYV8 317 aa11.08□□□□□ -0.63
CHFR-201ENST00000266880 FCER2P06734 321 aa11.08□□□□□ -0.64
CHFR-201ENST00000266880 RPS9P46781 194 aaKnown RBP11.08□□□□□ -0.64
CHFR-201ENST00000266880 ALG1LQ6GMV1 187 aa11.08□□□□□ -0.64
CHFR-201ENST00000266880 SMURF1Q9HCE7 757 aa11.08□□□□□ -0.64
CHFR-201ENST00000266880 BBIP1A8MTZ0 92 aa11.08□□□□□ -0.64
CHFR-201ENST00000266880 ITGA2BP08514 1039 aa11.08□□□□□ -0.64
CHFR-201ENST00000266880 SPARCP09486 303 aa11.08□□□□□ -0.64
CHFR-201ENST00000266880 ACTR3P61158 418 aa11.08□□□□□ -0.64
CHFR-201ENST00000266880 CPSF6Q16630 551 aaKnown RBP eCLIP11.08□□□□□ -0.64
CHFR-201ENST00000266880 VPS26BQ4G0F5 336 aa11.08□□□□□ -0.64
CHFR-201ENST00000266880 BORAQ6PGQ7 559 aa11.08□□□□□ -0.64
CHFR-201ENST00000266880 EMID1Q96A84 441 aaPredicted RBP11.08□□□□□ -0.64
CHFR-201ENST00000266880 RPL26L1Q9UNX3 145 aaKnown RBP11.08□□□□□ -0.64
CHFR-201ENST00000266880 NUDT7P0C024 238 aa11.08□□□□□ -0.64
CHFR-201ENST00000266880 MECP2P51608 486 aaKnown RBP11.08□□□□□ -0.64
CHFR-201ENST00000266880 RFKQ969G6 155 aa11.08□□□□□ -0.64
CHFR-201ENST00000266880 CERS2Q96G23 380 aa11.08□□□□□ -0.64
CHFR-201ENST00000266880 TTLL2Q9BWV7 592 aa11.08□□□□□ -0.64
CHFR-201ENST00000266880 COMMD4Q9H0A8 199 aa11.08□□□□□ -0.64
CHFR-201ENST00000266880 AAASQ9NRG9 546 aa11.08□□□□□ -0.64
CHFR-201ENST00000266880 MFHAS1Q9Y4C4 1052 aa11.08□□□□□ -0.64
CHFR-201ENST00000266880 EML1O00423 815 aa11.08□□□□□ -0.64
CHFR-201ENST00000266880 LIASO43766 372 aa11.08□□□□□ -0.64
CHFR-201ENST00000266880 ACSL1P33121 698 aa11.08□□□□□ -0.64
CHFR-201ENST00000266880 PCID2Q5JVF3 399 aa11.08□□□□□ -0.64
CHFR-201ENST00000266880 SNX15Q9NRS6 342 aa11.08□□□□□ -0.64
CHFR-201ENST00000266880 TIE1P35590 1138 aa11.08□□□□□ -0.64
CHFR-201ENST00000266880 LACTB2Q53H82 288 aaPredicted RBP11.08□□□□□ -0.64
CHFR-201ENST00000266880 DNASE1L2Q92874 299 aa11.08□□□□□ -0.64
CHFR-201ENST00000266880 TBCBQ99426 244 aa11.08□□□□□ -0.64
CHFR-201ENST00000266880 CDH7Q9ULB5 785 aa11.08□□□□□ -0.64
CHFR-201ENST00000266880 A0A0U1RQJ8 604 aa11.08□□□□□ -0.64
CHFR-201ENST00000266880 TMED4Q7Z7H5 227 aa11.08□□□□□ -0.64
CHFR-201ENST00000266880 GALNT11Q8NCW6 608 aa11.08□□□□□ -0.64
CHFR-201ENST00000266880 C7orf50Q9BRJ6 194 aaKnown RBP11.08□□□□□ -0.64
CHFR-201ENST00000266880 ADAMTS12P58397 1594 aa11.08□□□□□ -0.64
CHFR-201ENST00000266880 E2F3O00716 465 aa11.08□□□□□ -0.64
CHFR-201ENST00000266880 PIRTP0C851 137 aa11.08□□□□□ -0.64
CHFR-201ENST00000266880 KDELR1P24390 212 aa11.08□□□□□ -0.64
CHFR-201ENST00000266880 ARCN1P48444 511 aaKnown RBP11.08□□□□□ -0.64
CHFR-201ENST00000266880 UGT8Q16880 541 aa11.08□□□□□ -0.64
CHFR-201ENST00000266880 CHERPQ8IWX8 916 aaKnown RBP11.08□□□□□ -0.64
CHFR-201ENST00000266880 TESCQ96BS2 214 aa11.08□□□□□ -0.64
CHFR-201ENST00000266880 PWWP2AQ96N64 755 aa11.08□□□□□ -0.64
CHFR-201ENST00000266880 PGLYRP2Q96PD5 576 aa11.08□□□□□ -0.64
CHFR-201ENST00000266880 ATP13A3Q9H7F0 1226 aa11.08□□□□□ -0.64
CHFR-201ENST00000266880 GPSM3Q9Y4H4 160 aa11.08□□□□□ -0.64
CHFR-201ENST00000266880 NUP153P49790 1475 aaKnown RBP11.08□□□□□ -0.64
CHFR-201ENST00000266880 ERVK-7P63135 1459 aa11.08□□□□□ -0.64
CHFR-201ENST00000266880 ZW10O43264 779 aa11.08□□□□□ -0.64
CHFR-201ENST00000266880 CPT1AP50416 773 aa11.08□□□□□ -0.64
CHFR-201ENST00000266880 HJURPQ8NCD3 748 aaPredicted RBP11.08□□□□□ -0.64
CHFR-201ENST00000266880 KCNU1A8MYU2 1149 aa11.07□□□□□ -0.64
CHFR-201ENST00000266880 NUAK1O60285 661 aa11.07□□□□□ -0.64
CHFR-201ENST00000266880 TULP3O75386 442 aa11.07□□□□□ -0.64
CHFR-201ENST00000266880 LHX1P48742 406 aa11.07□□□□□ -0.64
CHFR-201ENST00000266880 CASP9P55211 416 aa11.07□□□□□ -0.64
CHFR-201ENST00000266880 PTPAQ15257 358 aa11.07□□□□□ -0.64
CHFR-201ENST00000266880 SPIN3Q5JUX0 258 aa11.07□□□□□ -0.64
CHFR-201ENST00000266880 AUTS2Q8WXX7 1259 aa11.07□□□□□ -0.64
CHFR-201ENST00000266880 COL15A1P39059 1388 aa11.07□□□□□ -0.64
CHFR-201ENST00000266880 SSX4O60224 188 aa11.07□□□□□ -0.64
CHFR-201ENST00000266880 RP2O75695 350 aa11.07□□□□□ -0.64
CHFR-201ENST00000266880 TFPTP0C1Z6 253 aa11.07□□□□□ -0.64
CHFR-201ENST00000266880 FDX1P10109 184 aa11.07□□□□□ -0.64
CHFR-201ENST00000266880 IGFALSP35858 605 aa11.07□□□□□ -0.64
CHFR-201ENST00000266880 CPSF7Q8N684 471 aaKnown RBP11.07□□□□□ -0.64
CHFR-201ENST00000266880 KIAA0895Q8NCT3 520 aa11.07□□□□□ -0.64
CHFR-201ENST00000266880 SLC2A14Q8TDB8 520 aa11.07□□□□□ -0.64
CHFR-201ENST00000266880 AP2M1Q96CW1 435 aa11.07□□□□□ -0.64
CHFR-201ENST00000266880 HIPK3Q9H422 1215 aa11.07□□□□□ -0.64
CHFR-201ENST00000266880 ATP10BO94823 1461 aa11.07□□□□□ -0.64
CHFR-201ENST00000266880 UGT2B4P06133 528 aa11.07□□□□□ -0.64
CHFR-201ENST00000266880 ABHD2P08910 425 aa11.07□□□□□ -0.64
CHFR-201ENST00000266880 DNAJB2P25686 324 aa11.07□□□□□ -0.64
CHFR-201ENST00000266880 MARCKSL1P49006 195 aa11.07□□□□□ -0.64
CHFR-201ENST00000266880 ZNF697Q5TEC3 545 aa11.07□□□□□ -0.64
CHFR-201ENST00000266880 SDR16C5Q8N3Y7 309 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms