RNA–Protein interactions for RNA: ENST00000266546.10

CLSTN3-201, Transcript of calsyntenin 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CLSTN3, Length 4,185 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-201ENST00000266546 BEND5Q7L4P6 421 aa11.45□□□□□ -0.58
CLSTN3-201ENST00000266546 OTOP3Q7RTS5 596 aa11.45□□□□□ -0.58
CLSTN3-201ENST00000266546 ERMP1Q7Z2K6 904 aa11.45□□□□□ -0.58
CLSTN3-201ENST00000266546 GPSM1Q86YR5 675 aa11.45□□□□□ -0.58
CLSTN3-201ENST00000266546 PLD6Q8N2A8 252 aaKnown RBP11.45□□□□□ -0.58
CLSTN3-201ENST00000266546 UBASH3BQ8TF42 649 aa11.45□□□□□ -0.58
CLSTN3-201ENST00000266546 TWIST2Q8WVJ9 160 aa11.45□□□□□ -0.58
CLSTN3-201ENST00000266546 SCLYQ96I15 445 aa11.45□□□□□ -0.58
CLSTN3-201ENST00000266546 BIRC8Q96P09 236 aa11.45□□□□□ -0.58
CLSTN3-201ENST00000266546 TMEM9Q9P0T7 183 aa11.45□□□□□ -0.58
CLSTN3-201ENST00000266546 PSME2Q9UL46 239 aa11.45□□□□□ -0.58
CLSTN3-201ENST00000266546 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.44□□□□□ -0.58
CLSTN3-201ENST00000266546 YJEFN3A6XGL0 299 aa11.44□□□□□ -0.58
CLSTN3-201ENST00000266546 FOXD2O60548 495 aaPredicted RBP11.44□□□□□ -0.58
CLSTN3-201ENST00000266546 CCNKO75909 580 aa11.44□□□□□ -0.58
CLSTN3-201ENST00000266546 MLYCDO95822 493 aa11.44□□□□□ -0.58
CLSTN3-201ENST00000266546 GUCA1CO95843 209 aa11.44□□□□□ -0.58
CLSTN3-201ENST00000266546 ZNF182P17025 639 aaPredicted RBP11.44□□□□□ -0.58
CLSTN3-201ENST00000266546 ZNF37AP17032 561 aaPredicted RBP11.44□□□□□ -0.58
CLSTN3-201ENST00000266546 PPP3CCP48454 512 aa11.44□□□□□ -0.58
CLSTN3-201ENST00000266546 ZNF177Q13360 481 aaPredicted RBP11.44□□□□□ -0.58
CLSTN3-201ENST00000266546 DDX39BQ13838 428 aaKnown RBP11.44□□□□□ -0.58
CLSTN3-201ENST00000266546 OR2T12Q8NG77 320 aa11.44□□□□□ -0.58
CLSTN3-201ENST00000266546 ZNF420Q8TAQ5 688 aaPredicted RBP11.44□□□□□ -0.58
CLSTN3-201ENST00000266546 TEX12Q9BXU0 123 aa11.44□□□□□ -0.58
CLSTN3-201ENST00000266546 REEP1Q9H902 201 aa11.44□□□□□ -0.58
CLSTN3-201ENST00000266546 TRIM39Q9HCM9 518 aa11.44□□□□□ -0.58
CLSTN3-201ENST00000266546 PCDH12Q9NPG4 1184 aa11.44□□□□□ -0.58
CLSTN3-201ENST00000266546 EFCAB10A6NFE3 127 aa11.44□□□□□ -0.58
CLSTN3-201ENST00000266546 DLX3O60479 287 aa11.44□□□□□ -0.58
CLSTN3-201ENST00000266546 CLIC3O95833 236 aa11.44□□□□□ -0.58
CLSTN3-201ENST00000266546 PORP16435 677 aaPredicted RBP11.44□□□□□ -0.58
CLSTN3-201ENST00000266546 KRT20P35900 424 aa11.44□□□□□ -0.58
CLSTN3-201ENST00000266546 IDH2P48735 452 aaKnown RBP11.44□□□□□ -0.58
CLSTN3-201ENST00000266546 PRIM2P49643 509 aa11.44□□□□□ -0.58
CLSTN3-201ENST00000266546 KRT33BQ14525 404 aa11.44□□□□□ -0.58
CLSTN3-201ENST00000266546 TIMM50Q3ZCQ8 353 aa11.44□□□□□ -0.58
CLSTN3-201ENST00000266546 NIPAL1Q6NVV3 410 aa11.44□□□□□ -0.58
CLSTN3-201ENST00000266546 ESRP1Q6NXG1 681 aaKnown RBP11.44□□□□□ -0.58
CLSTN3-201ENST00000266546 RRM2BQ7LG56 351 aa11.44□□□□□ -0.58
CLSTN3-201ENST00000266546 PQLC3Q8N755 202 aa11.44□□□□□ -0.58
CLSTN3-201ENST00000266546 KBTBD8Q8NFY9 601 aa11.44□□□□□ -0.58
CLSTN3-201ENST00000266546 SPPL2AQ8TCT8 520 aa11.44□□□□□ -0.58
CLSTN3-201ENST00000266546 PIWIL1Q96J94 861 aaKnown RBP11.44□□□□□ -0.58
CLSTN3-201ENST00000266546 CEP295NLQ96MC4 621 aa11.44□□□□□ -0.58
CLSTN3-201ENST00000266546 TMEM245Q9H330 911 aa11.44□□□□□ -0.58
CLSTN3-201ENST00000266546 CCNB1IP1Q9NPC3 277 aa11.44□□□□□ -0.58
CLSTN3-201ENST00000266546 FAIMQ9NVQ4 179 aa11.44□□□□□ -0.58
CLSTN3-201ENST00000266546 AP3M1Q9Y2T2 418 aa11.44□□□□□ -0.58
CLSTN3-201ENST00000266546 C5orf58C9J3I9 102 aa11.44□□□□□ -0.58
CLSTN3-201ENST00000266546 FBP2O00757 339 aa11.44□□□□□ -0.58
CLSTN3-201ENST00000266546 OAZ2O95190 189 aa11.44□□□□□ -0.58
CLSTN3-201ENST00000266546 CPSF4O95639 269 aaKnown RBP11.44□□□□□ -0.58
CLSTN3-201ENST00000266546 TFAP2AP05549 437 aa11.44□□□□□ -0.58
CLSTN3-201ENST00000266546 OR1D2P34982 312 aa11.44□□□□□ -0.58
CLSTN3-201ENST00000266546 CD86P42081 329 aa11.44□□□□□ -0.58
CLSTN3-201ENST00000266546 WNT3AP56704 352 aa11.44□□□□□ -0.58
CLSTN3-201ENST00000266546 INTS11Q5TA45 600 aaKnown RBP11.44□□□□□ -0.58
CLSTN3-201ENST00000266546 CHSY3Q70JA7 882 aa11.44□□□□□ -0.58
CLSTN3-201ENST00000266546 TMEM132CQ8N3T6 1108 aa11.44□□□□□ -0.58
CLSTN3-201ENST00000266546 PHC3Q8NDX5 983 aa11.44□□□□□ -0.58
CLSTN3-201ENST00000266546 C17orf50Q8WW18 174 aa11.44□□□□□ -0.58
CLSTN3-201ENST00000266546 TEKT5Q96M29 485 aa11.44□□□□□ -0.58
CLSTN3-201ENST00000266546 YTHDF1Q9BYJ9 559 aaKnown RBP11.44□□□□□ -0.58
CLSTN3-201ENST00000266546 CLPBQ9H078 707 aa11.44□□□□□ -0.58
CLSTN3-201ENST00000266546 ELOVL6Q9H5J4 265 aa11.44□□□□□ -0.58
CLSTN3-201ENST00000266546 GLOD4Q9HC38 313 aa11.44□□□□□ -0.58
CLSTN3-201ENST00000266546 DUSP12Q9UNI6 340 aa11.44□□□□□ -0.58
CLSTN3-201ENST00000266546 PLXNA1Q9UIW2 1896 aa11.43□□□□□ -0.58
CLSTN3-201ENST00000266546 TSC22D2O75157 780 aa11.43□□□□□ -0.58
CLSTN3-201ENST00000266546 ANGPTL1O95841 491 aa11.43□□□□□ -0.58
CLSTN3-201ENST00000266546 KRT6AP02538 564 aa11.43□□□□□ -0.58
CLSTN3-201ENST00000266546 KRT6BP04259 564 aa11.43□□□□□ -0.58
CLSTN3-201ENST00000266546 MBL2P11226 248 aaPredicted RBP11.43□□□□□ -0.58
CLSTN3-201ENST00000266546 MAPK1P28482 360 aa11.43□□□□□ -0.58
CLSTN3-201ENST00000266546 ALDH4A1P30038 563 aa11.43□□□□□ -0.58
CLSTN3-201ENST00000266546 S100A3P33764 101 aa11.43□□□□□ -0.58
CLSTN3-201ENST00000266546 KRT6CP48668 564 aa11.43□□□□□ -0.58
CLSTN3-201ENST00000266546 GPR17Q13304 367 aa11.43□□□□□ -0.58
CLSTN3-201ENST00000266546 CCDC142Q17RM4 750 aa11.43□□□□□ -0.58
CLSTN3-201ENST00000266546 TTLL9Q3SXZ7 439 aa11.43□□□□□ -0.58
CLSTN3-201ENST00000266546 INO80DQ53TQ3 878 aaPredicted RBP11.43□□□□□ -0.58
CLSTN3-201ENST00000266546 PDZK1Q5T2W1 519 aa11.43□□□□□ -0.58
CLSTN3-201ENST00000266546 GPR158Q5T848 1215 aa11.43□□□□□ -0.58
CLSTN3-201ENST00000266546 HECTD2Q5U5R9 776 aa11.43□□□□□ -0.58
CLSTN3-201ENST00000266546 P2RY8Q86VZ1 359 aa11.43□□□□□ -0.58
CLSTN3-201ENST00000266546 SLC2A13Q96QE2 648 aa11.43□□□□□ -0.58
CLSTN3-201ENST00000266546 CATSPERZQ9NTU4 200 aa11.43□□□□□ -0.58
CLSTN3-201ENST00000266546 UBAP1Q9NZ09 502 aa11.43□□□□□ -0.58
CLSTN3-201ENST00000266546 SFMBT1Q9UHJ3 866 aa11.43□□□□□ -0.58
CLSTN3-201ENST00000266546 SNX8Q9Y5X2 465 aa11.43□□□□□ -0.58
CLSTN3-201ENST00000266546 PRRC2BQ5JSZ5 2229 aaKnown RBP11.43□□□□□ -0.58
CLSTN3-201ENST00000266546 ZNF236Q9UL36 1845 aa11.43□□□□□ -0.58
CLSTN3-201ENST00000266546 ENDOD1O94919 500 aa11.43□□□□□ -0.58
CLSTN3-201ENST00000266546 CYP4B1P13584 511 aa11.43□□□□□ -0.58
CLSTN3-201ENST00000266546 OXCT1P55809 520 aa11.43□□□□□ -0.58
CLSTN3-201ENST00000266546 FAM189BP81408 668 aa11.43□□□□□ -0.58
CLSTN3-201ENST00000266546 PKDCCQ504Y2 493 aa11.43□□□□□ -0.58
CLSTN3-201ENST00000266546 COLGALT2Q8IYK4 626 aa11.43□□□□□ -0.58
CLSTN3-201ENST00000266546 SCML4Q8N228 414 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms