RNA–Protein interactions for RNA: ENST00000263956.7

GTF3C3-201, Transcript of general transcription factor IIIC subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF3C3, Length 4,282 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-201ENST00000263956 CACHD1Q5VU97 1274 aa8.19□□□□□ -1.1
GTF3C3-201ENST00000263956 CRTC1Q6UUV9 634 aa8.19□□□□□ -1.1
GTF3C3-201ENST00000263956 C11orf96Q7Z7L8 435 aa8.19□□□□□ -1.1
GTF3C3-201ENST00000263956 CPNE9Q8IYJ1 553 aa8.19□□□□□ -1.1
GTF3C3-201ENST00000263956 TEX26Q8N6G2 289 aa8.19□□□□□ -1.1
GTF3C3-201ENST00000263956 OR2A12Q8NGT7 310 aa8.19□□□□□ -1.1
GTF3C3-201ENST00000263956 OR10G6Q8NH81 332 aa8.19□□□□□ -1.1
GTF3C3-201ENST00000263956 RAB3IPQ96QF0 476 aaPredicted RBP8.19□□□□□ -1.1
GTF3C3-201ENST00000263956 THAP1Q9NVV9 213 aa8.19□□□□□ -1.1
GTF3C3-201ENST00000263956 SPASTQ9UBP0 616 aa8.19□□□□□ -1.1
GTF3C3-201ENST00000263956 GMEB2Q9UKD1 530 aa8.19□□□□□ -1.1
GTF3C3-201ENST00000263956 USH1CQ9Y6N9 552 aa8.19□□□□□ -1.1
GTF3C3-201ENST00000263956 RHPN2P1A8MT19 583 aa8.19□□□□□ -1.1
GTF3C3-201ENST00000263956 PLK4O00444 970 aa8.19□□□□□ -1.1
GTF3C3-201ENST00000263956 CFLARO15519 480 aa8.19□□□□□ -1.1
GTF3C3-201ENST00000263956 AP2A2O94973 939 aa8.19□□□□□ -1.1
GTF3C3-201ENST00000263956 EGFP01133 1207 aa8.19□□□□□ -1.1
GTF3C3-201ENST00000263956 C8GP07360 202 aa8.19□□□□□ -1.1
GTF3C3-201ENST00000263956 CHRM1P11229 460 aaPredicted RBP8.19□□□□□ -1.1
GTF3C3-201ENST00000263956 RGRP47804 291 aa8.19□□□□□ -1.1
GTF3C3-201ENST00000263956 SLC1A6P48664 564 aa8.19□□□□□ -1.1
GTF3C3-201ENST00000263956 SPINT3P49223 89 aa8.19□□□□□ -1.1
GTF3C3-201ENST00000263956 SKP1P63208 163 aa8.19□□□□□ -1.1
GTF3C3-201ENST00000263956 NFATC2Q13469 925 aa8.19□□□□□ -1.1
GTF3C3-201ENST00000263956 CAPN13Q6MZZ7 669 aaPredicted RBP8.19□□□□□ -1.1
GTF3C3-201ENST00000263956 PIWIL4Q7Z3Z4 852 aaKnown RBP8.19□□□□□ -1.1
GTF3C3-201ENST00000263956 CRIPAKQ8N1N5 446 aa8.19□□□□□ -1.1
GTF3C3-201ENST00000263956 OR2T34Q8NGX1 318 aa8.19□□□□□ -1.1
GTF3C3-201ENST00000263956 WDR92Q96MX6 357 aa8.19□□□□□ -1.1
GTF3C3-201ENST00000263956 PRSS16Q9NQE7 514 aa8.19□□□□□ -1.1
GTF3C3-201ENST00000263956 SOHLH2Q9NX45 425 aa8.19□□□□□ -1.1
GTF3C3-201ENST00000263956 PSMD13Q9UNM6 376 aa8.19□□□□□ -1.1
GTF3C3-201ENST00000263956 NPEPPSL1A6NEC2 478 aa8.19□□□□□ -1.1
GTF3C3-201ENST00000263956 PSMD11O00231 422 aa8.19□□□□□ -1.1
GTF3C3-201ENST00000263956 GRID2O43424 1007 aa8.19□□□□□ -1.1
GTF3C3-201ENST00000263956 MLYCDO95822 493 aa8.19□□□□□ -1.1
GTF3C3-201ENST00000263956 NDUFS1P28331 727 aa8.19□□□□□ -1.1
GTF3C3-201ENST00000263956 NUDT1P36639 197 aa8.19□□□□□ -1.1
GTF3C3-201ENST00000263956 TMEM115Q12893 351 aaPredicted RBP8.19□□□□□ -1.1
GTF3C3-201ENST00000263956 HTR4Q13639 388 aa8.19□□□□□ -1.1
GTF3C3-201ENST00000263956 TMTC4Q5T4D3 741 aa8.19□□□□□ -1.1
GTF3C3-201ENST00000263956 EXOC3L1Q86VI1 746 aa8.19□□□□□ -1.1
GTF3C3-201ENST00000263956 HEATR4Q86WZ0 1026 aa8.19□□□□□ -1.1
GTF3C3-201ENST00000263956 UNC5BQ8IZJ1 945 aa8.19□□□□□ -1.1
GTF3C3-201ENST00000263956 TEX9Q8N6V9 391 aa8.19□□□□□ -1.1
GTF3C3-201ENST00000263956 AVL9Q8NBF6 648 aa8.19□□□□□ -1.1
GTF3C3-201ENST00000263956 SIDT2Q8NBJ9 832 aaKnown RBP8.19□□□□□ -1.1
GTF3C3-201ENST00000263956 SMRP1Q8NCR6 262 aa8.19□□□□□ -1.1
GTF3C3-201ENST00000263956 VPS37AQ8NEZ2 397 aa8.19□□□□□ -1.1
GTF3C3-201ENST00000263956 PIGKQ92643 395 aa8.19□□□□□ -1.1
GTF3C3-201ENST00000263956 NXNL1Q96CM4 212 aa8.19□□□□□ -1.1
GTF3C3-201ENST00000263956 MAGEB10Q96LZ2 347 aaPredicted RBP8.19□□□□□ -1.1
GTF3C3-201ENST00000263956 C12orf66Q96MD2 445 aa8.19□□□□□ -1.1
GTF3C3-201ENST00000263956 KLC4Q9NSK0 619 aa8.19□□□□□ -1.1
GTF3C3-201ENST00000263956 DKK3Q9UBP4 350 aa8.19□□□□□ -1.1
GTF3C3-201ENST00000263956 BAG5Q9UL15 447 aa8.19□□□□□ -1.1
GTF3C3-201ENST00000263956 F5P12259 2224 aa8.19□□□□□ -1.1
GTF3C3-201ENST00000263956 EPOPA6NHQ4 379 aa8.18□□□□□ -1.1
GTF3C3-201ENST00000263956 ANKDD1BA6NHY2 528 aa8.18□□□□□ -1.1
GTF3C3-201ENST00000263956 NIPSNAP2O75323 286 aa8.18□□□□□ -1.1
GTF3C3-201ENST00000263956 CCNDBP1O95273 360 aa8.18□□□□□ -1.1
GTF3C3-201ENST00000263956 TCF3P15923 654 aa8.18□□□□□ -1.1
GTF3C3-201ENST00000263956 TIMP2P16035 220 aa8.18□□□□□ -1.1
GTF3C3-201ENST00000263956 RPIAP49247 311 aa8.18□□□□□ -1.1
GTF3C3-201ENST00000263956 OVGP1Q12889 678 aa8.18□□□□□ -1.1
GTF3C3-201ENST00000263956 PARS2Q7L3T8 475 aaKnown RBP8.18□□□□□ -1.1
GTF3C3-201ENST00000263956 TMEM150AQ86TG1 271 aa8.18□□□□□ -1.1
GTF3C3-201ENST00000263956 CILP2Q8IUL8 1156 aa8.18□□□□□ -1.1
GTF3C3-201ENST00000263956 SYNPOQ8N3V7 929 aa8.18□□□□□ -1.1
GTF3C3-201ENST00000263956 ZNF655Q8N720 491 aaPredicted RBP8.18□□□□□ -1.1
GTF3C3-201ENST00000263956 SEMA4BQ9NPR2 832 aaPredicted RBP8.18□□□□□ -1.1
GTF3C3-201ENST00000263956 EPS15L1Q9UBC2 864 aa8.18□□□□□ -1.1
GTF3C3-201ENST00000263956 STOML2Q9UJZ1 356 aa8.18□□□□□ -1.1
GTF3C3-201ENST00000263956 RIMKLBQ9ULI2 386 aa8.18□□□□□ -1.1
GTF3C3-201ENST00000263956 CLEC4EQ9ULY5 219 aa8.18□□□□□ -1.1
GTF3C3-201ENST00000263956 TMEM98Q9Y2Y6 226 aa8.18□□□□□ -1.1
GTF3C3-201ENST00000263956 ARID2Q68CP9 1835 aa8.18□□□□□ -1.1
GTF3C3-201ENST00000263956 E7ESA3 106 aa8.18□□□□□ -1.1
GTF3C3-201ENST00000263956 GSTA4O15217 222 aa8.18□□□□□ -1.1
GTF3C3-201ENST00000263956 RASSF9O75901 435 aa8.18□□□□□ -1.1
GTF3C3-201ENST00000263956 SASH3O75995 380 aa8.18□□□□□ -1.1
GTF3C3-201ENST00000263956 WDR47O94967 919 aa8.18□□□□□ -1.1
GTF3C3-201ENST00000263956 KLHL2O95198 593 aa8.18□□□□□ -1.1
GTF3C3-201ENST00000263956 CRHR1P34998 444 aa8.18□□□□□ -1.1
GTF3C3-201ENST00000263956 CCNFP41002 786 aa8.18□□□□□ -1.1
GTF3C3-201ENST00000263956 PXNP49023 591 aaPredicted RBP8.18□□□□□ -1.1
GTF3C3-201ENST00000263956 EIF2B5Q13144 721 aaKnown RBP8.18□□□□□ -1.1
GTF3C3-201ENST00000263956 NR6A1Q15406 480 aa8.18□□□□□ -1.1
GTF3C3-201ENST00000263956 TMEM184AQ6ZMB5 413 aa8.18□□□□□ -1.1
GTF3C3-201ENST00000263956 CYP4V2Q6ZWL3 525 aaPredicted RBP8.18□□□□□ -1.1
GTF3C3-201ENST00000263956 DPPA4Q7L190 304 aa8.18□□□□□ -1.1
GTF3C3-201ENST00000263956 TSPAN33Q86UF1 283 aa8.18□□□□□ -1.1
GTF3C3-201ENST00000263956 C17orf64Q86WR6 236 aa8.18□□□□□ -1.1
GTF3C3-201ENST00000263956 RELL1Q8IUW5 271 aa8.18□□□□□ -1.1
GTF3C3-201ENST00000263956 CLDN19Q8N6F1 224 aa8.18□□□□□ -1.1
GTF3C3-201ENST00000263956 FAM46DQ8NEK8 389 aa8.18□□□□□ -1.1
GTF3C3-201ENST00000263956 LCN9Q8WX39 176 aa8.18□□□□□ -1.1
GTF3C3-201ENST00000263956 PLEKHG4BQ96PX9 1271 aa8.18□□□□□ -1.1
GTF3C3-201ENST00000263956 CCT8L2Q96SF2 557 aa8.18□□□□□ -1.1
GTF3C3-201ENST00000263956 SERPINI1Q99574 410 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms