RNA–Protein interactions for RNA: ENST00000263121.11

SMARCB1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMARCB1, Length 1,690 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-201ENST00000263121 PTERQ96BW5 349 aa22.64■■□□□ 1.21
SMARCB1-201ENST00000263121 NUS1Q96E22 293 aa22.64■■□□□ 1.21
SMARCB1-201ENST00000263121 TSPAN6O43657 245 aa22.63■■□□□ 1.21
SMARCB1-201ENST00000263121 DLX3O60479 287 aa22.63■■□□□ 1.21
SMARCB1-201ENST00000263121 OCRLQ01968 901 aa22.63■■□□□ 1.21
SMARCB1-201ENST00000263121 STX3Q13277 289 aa22.63■■□□□ 1.21
SMARCB1-201ENST00000263121 HSF5Q4G112 596 aaPredicted RBP22.63■■□□□ 1.21
SMARCB1-201ENST00000263121 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP22.63■■□□□ 1.21
SMARCB1-201ENST00000263121 PPP1R14CQ8TAE6 165 aa22.63■■□□□ 1.21
SMARCB1-201ENST00000263121 BTN2A2Q8WVV5 523 aa22.63■■□□□ 1.21
SMARCB1-201ENST00000263121 C7orf26Q96N11 449 aa22.63■■□□□ 1.21
SMARCB1-201ENST00000263121 TFB2MQ9H5Q4 396 aaKnown RBP22.63■■□□□ 1.21
SMARCB1-201ENST00000263121 ALG9Q9H6U8 611 aa22.63■■□□□ 1.21
SMARCB1-201ENST00000263121 PRUNE2Q8WUY3 3088 aa22.63■■□□□ 1.21
SMARCB1-201ENST00000263121 ATG2BQ96BY7 2078 aa22.62■■□□□ 1.21
SMARCB1-201ENST00000263121 A0A1W2PP55 124 aa22.62■■□□□ 1.21
SMARCB1-201ENST00000263121 LZTS3O60299 673 aaPredicted RBP22.62■■□□□ 1.21
SMARCB1-201ENST00000263121 TRIM13O60858 407 aa22.62■■□□□ 1.21
SMARCB1-201ENST00000263121 SOD1P00441 154 aa22.62■■□□□ 1.21
SMARCB1-201ENST00000263121 GRK2P25098 689 aa22.62■■□□□ 1.21
SMARCB1-201ENST00000263121 PRKAA2P54646 552 aa22.62■■□□□ 1.21
SMARCB1-201ENST00000263121 ATP6V0D1P61421 351 aa22.62■■□□□ 1.21
SMARCB1-201ENST00000263121 DPTQ07507 201 aa22.62■■□□□ 1.21
SMARCB1-201ENST00000263121 CCDC15Q0P6D6 951 aa22.62■■□□□ 1.21
SMARCB1-201ENST00000263121 NLRP8Q86W28 1048 aa22.62■■□□□ 1.21
SMARCB1-201ENST00000263121 INPP5DQ92835 1189 aa22.62■■□□□ 1.21
SMARCB1-201ENST00000263121 GLYATL1Q969I3 302 aa22.62■■□□□ 1.21
SMARCB1-201ENST00000263121 SEC16BQ96JE7 1060 aa22.62■■□□□ 1.21
SMARCB1-201ENST00000263121 SARS2Q9NP81 518 aaKnown RBP22.62■■□□□ 1.21
SMARCB1-201ENST00000263121 LATS2Q9NRM7 1088 aa22.62■■□□□ 1.21
SMARCB1-201ENST00000263121 DUSP12Q9UNI6 340 aa22.62■■□□□ 1.21
SMARCB1-201ENST00000263121 SLC25A14O95258 325 aaPredicted RBP22.62■■□□□ 1.21
SMARCB1-201ENST00000263121 IL2P60568 153 aa22.62■■□□□ 1.21
SMARCB1-201ENST00000263121 TFF2Q03403 129 aa22.62■■□□□ 1.21
SMARCB1-201ENST00000263121 LIPMQ5VYY2 423 aa22.62■■□□□ 1.21
SMARCB1-201ENST00000263121 TMPRSS6Q8IU80 811 aa22.62■■□□□ 1.21
SMARCB1-201ENST00000263121 CPNE9Q8IYJ1 553 aa22.62■■□□□ 1.21
SMARCB1-201ENST00000263121 RPLP0P6Q8NHW5 317 aa22.62■■□□□ 1.21
SMARCB1-201ENST00000263121 RHEBL1Q8TAI7 183 aa22.62■■□□□ 1.21
SMARCB1-201ENST00000263121 SREK1Q8WXA9 508 aaKnown RBP22.62■■□□□ 1.21
SMARCB1-201ENST00000263121 C20orf27Q9GZN8 174 aa22.62■■□□□ 1.21
SMARCB1-201ENST00000263121 THAP1Q9NVV9 213 aa22.62■■□□□ 1.21
SMARCB1-201ENST00000263121 H2AFYO75367 372 aaKnown RBP22.61■■□□□ 1.21
SMARCB1-201ENST00000263121 RNASEH2AO75792 299 aaKnown RBP22.61■■□□□ 1.21
SMARCB1-201ENST00000263121 ATP1B2P14415 290 aaPredicted RBP22.61■■□□□ 1.21
SMARCB1-201ENST00000263121 ATP5F1P24539 256 aaPredicted RBP22.61■■□□□ 1.21
SMARCB1-201ENST00000263121 AKT1P31749 480 aa22.61■■□□□ 1.21
SMARCB1-201ENST00000263121 KCNC1P48547 511 aa22.61■■□□□ 1.21
SMARCB1-201ENST00000263121 OR4D1Q15615 310 aa22.61■■□□□ 1.21
SMARCB1-201ENST00000263121 MLF2Q15773 248 aaPredicted RBP22.61■■□□□ 1.21
SMARCB1-201ENST00000263121 KHDC1Q4VXA5 237 aaKnown RBP22.61■■□□□ 1.21
SMARCB1-201ENST00000263121 EOGTQ5NDL2 527 aa22.61■■□□□ 1.21
SMARCB1-201ENST00000263121 LDLRAP1Q5SW96 308 aa22.61■■□□□ 1.21
SMARCB1-201ENST00000263121 SPATA21Q7Z572 469 aa22.61■■□□□ 1.21
SMARCB1-201ENST00000263121 PELI3Q8N2H9 469 aa22.61■■□□□ 1.21
SMARCB1-201ENST00000263121 EEF1AKMT1Q8WVE0 214 aa22.61■■□□□ 1.21
SMARCB1-201ENST00000263121 KIAA1191Q96A73 305 aa22.61■■□□□ 1.21
SMARCB1-201ENST00000263121 SGF29Q96ES7 293 aa22.61■■□□□ 1.21
SMARCB1-201ENST00000263121 LINGO1Q96FE5 620 aa22.61■■□□□ 1.21
SMARCB1-201ENST00000263121 DCUN1D1Q96GG9 259 aa22.61■■□□□ 1.21
SMARCB1-201ENST00000263121 PDLIM5Q96HC4 596 aaKnown RBP22.61■■□□□ 1.21
SMARCB1-201ENST00000263121 SLC6A17Q9H1V8 727 aa22.61■■□□□ 1.21
SMARCB1-201ENST00000263121 IKZF3Q9UKT9 509 aa22.61■■□□□ 1.21
SMARCB1-201ENST00000263121 CFAP99D6REC4 459 aa22.6■■□□□ 1.21
SMARCB1-201ENST00000263121 MAN2B1O00754 1011 aa22.6■■□□□ 1.21
SMARCB1-201ENST00000263121 TRIM16O95361 564 aa22.6■■□□□ 1.21
SMARCB1-201ENST00000263121 DNTTP04053 509 aa22.6■■□□□ 1.21
SMARCB1-201ENST00000263121 OR56A5P0C7T3 313 aa22.6■■□□□ 1.21
SMARCB1-201ENST00000263121 ITGB6P18564 788 aa22.6■■□□□ 1.21
SMARCB1-201ENST00000263121 CD72P21854 359 aa22.6■■□□□ 1.21
SMARCB1-201ENST00000263121 NAPRTQ6XQN6 538 aa22.6■■□□□ 1.21
SMARCB1-201ENST00000263121 PANX3Q96QZ0 392 aa22.6■■□□□ 1.21
SMARCB1-201ENST00000263121 ATOH8Q96SQ7 321 aa22.6■■□□□ 1.21
SMARCB1-201ENST00000263121 GATA5Q9BWX5 397 aaPredicted RBP22.6■■□□□ 1.21
SMARCB1-201ENST00000263121 ZNF395Q9H8N7 513 aaPredicted RBP22.6■■□□□ 1.21
SMARCB1-201ENST00000263121 SPATS2LQ9NUQ6 558 aaKnown RBP22.6■■□□□ 1.21
SMARCB1-201ENST00000263121 FBXL12Q9NXK8 326 aa22.6■■□□□ 1.21
SMARCB1-201ENST00000263121 KLHL42Q9P2K6 505 aa22.6■■□□□ 1.21
SMARCB1-201ENST00000263121 MBD1Q9UIS9 605 aaPredicted RBP22.6■■□□□ 1.21
SMARCB1-201ENST00000263121 CNOT6Q9ULM6 557 aaKnown RBP22.6■■□□□ 1.21
SMARCB1-201ENST00000263121 SCML1Q9UN30 329 aa22.6■■□□□ 1.21
SMARCB1-201ENST00000263121 CCDC189A1A4V9 331 aa22.59■■□□□ 1.21
SMARCB1-201ENST00000263121 ITM2AO43736 263 aa22.59■■□□□ 1.21
SMARCB1-201ENST00000263121 SGTAO43765 313 aa22.59■■□□□ 1.21
SMARCB1-201ENST00000263121 MTX2O75431 263 aa22.59■■□□□ 1.21
SMARCB1-201ENST00000263121 AP2A2O94973 939 aa22.59■■□□□ 1.21
SMARCB1-201ENST00000263121 SLC1A6P48664 564 aa22.59■■□□□ 1.21
SMARCB1-201ENST00000263121 DNAJB13P59910 316 aa22.59■■□□□ 1.21
SMARCB1-201ENST00000263121 ZBTB16Q05516 673 aa22.59■■□□□ 1.21
SMARCB1-201ENST00000263121 FOXR1Q6PIV2 292 aa22.59■■□□□ 1.21
SMARCB1-201ENST00000263121 CACNA2D3Q8IZS8 1091 aa22.59■■□□□ 1.21
SMARCB1-201ENST00000263121 ZBTB2Q8N680 514 aa22.59■■□□□ 1.21
SMARCB1-201ENST00000263121 CCDC197Q8NCU1 140 aa22.59■■□□□ 1.21
SMARCB1-201ENST00000263121 KCTD5Q9NXV2 234 aa22.59■■□□□ 1.21
SMARCB1-201ENST00000263121 MMP17Q9ULZ9 603 aa22.59■■□□□ 1.21
SMARCB1-201ENST00000263121 A8MT66 165 aa22.58■■□□□ 1.21
SMARCB1-201ENST00000263121 TMEM114B3SHH9 223 aa22.58■■□□□ 1.21
SMARCB1-201ENST00000263121 F8W8V4 182 aa22.58■■□□□ 1.21
SMARCB1-201ENST00000263121 K7ESM1 405 aa22.58■■□□□ 1.21
SMARCB1-201ENST00000263121 PLRG1O43660 514 aaKnown RBP22.58■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms