RNA–Protein interactions for RNA: ENST00000261584.8

PALB2-201, Transcript of partner and localizer of BRCA2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PALB2, Length 4,003 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-201ENST00000261584 PDE10AQ9Y233 779 aa10.02□□□□□ -0.8
PALB2-201ENST00000261584 ASNA1O43681 348 aa10.02□□□□□ -0.81
PALB2-201ENST00000261584 DFNA5O60443 496 aa10.02□□□□□ -0.81
PALB2-201ENST00000261584 ZNF26P17031 533 aaPredicted RBP10.02□□□□□ -0.81
PALB2-201ENST00000261584 MZF1P28698 734 aaPredicted RBP10.02□□□□□ -0.81
PALB2-201ENST00000261584 ST13P50502 369 aaKnown RBP10.02□□□□□ -0.81
PALB2-201ENST00000261584 COPZ1P61923 177 aa10.02□□□□□ -0.81
PALB2-201ENST00000261584 TRAF3Q13114 568 aa10.02□□□□□ -0.81
PALB2-201ENST00000261584 MED22Q15528 200 aa10.02□□□□□ -0.81
PALB2-201ENST00000261584 FSCN1Q16658 493 aaKnown RBP10.02□□□□□ -0.81
PALB2-201ENST00000261584 CTXN3Q4LDR2 81 aa10.02□□□□□ -0.81
PALB2-201ENST00000261584 CACHD1Q5VU97 1274 aa10.02□□□□□ -0.81
PALB2-201ENST00000261584 TIGD7Q6NT04 549 aaPredicted RBP10.02□□□□□ -0.81
PALB2-201ENST00000261584 NCCRP1Q6ZVX7 275 aaPredicted RBP10.02□□□□□ -0.81
PALB2-201ENST00000261584 ADGRG6Q86SQ4 1221 aa10.02□□□□□ -0.81
PALB2-201ENST00000261584 DENND1CQ8IV53 801 aa10.02□□□□□ -0.81
PALB2-201ENST00000261584 APOLD1Q96LR9 279 aa10.02□□□□□ -0.81
PALB2-201ENST00000261584 VAT1Q99536 393 aa10.02□□□□□ -0.81
PALB2-201ENST00000261584 COPS4Q9BT78 406 aa10.02□□□□□ -0.81
PALB2-201ENST00000261584 HIPK3Q9H422 1215 aa10.02□□□□□ -0.81
PALB2-201ENST00000261584 CMTM6Q9NX76 183 aa10.02□□□□□ -0.81
PALB2-201ENST00000261584 GMIPQ9P107 970 aa10.02□□□□□ -0.81
PALB2-201ENST00000261584 POU2F3Q9UKI9 436 aa10.02□□□□□ -0.81
PALB2-201ENST00000261584 DNAH12Q6ZR08 3092 aa10.02□□□□□ -0.81
PALB2-201ENST00000261584 M0R129 80 aa10.02□□□□□ -0.81
PALB2-201ENST00000261584 GSRP00390 522 aa10.02□□□□□ -0.81
PALB2-201ENST00000261584 XPAP23025 273 aaPredicted RBP10.02□□□□□ -0.81
PALB2-201ENST00000261584 ATP6V1E1P36543 226 aa10.02□□□□□ -0.81
PALB2-201ENST00000261584 CLCN2P51788 898 aa10.02□□□□□ -0.81
PALB2-201ENST00000261584 NCS1P62166 190 aa10.02□□□□□ -0.81
PALB2-201ENST00000261584 GPR162Q16538 588 aa10.02□□□□□ -0.81
PALB2-201ENST00000261584 FAM171A1Q5VUB5 890 aa10.02□□□□□ -0.81
PALB2-201ENST00000261584 ANKRD26P1Q6NSI1 321 aa10.02□□□□□ -0.81
PALB2-201ENST00000261584 LRRC52Q8N7C0 313 aa10.02□□□□□ -0.81
PALB2-201ENST00000261584 PIK3C3Q8NEB9 887 aa10.02□□□□□ -0.81
PALB2-201ENST00000261584 SH3RF2Q8TEC5 729 aa10.02□□□□□ -0.81
PALB2-201ENST00000261584 SELENOMQ8WWX9 145 aa10.02□□□□□ -0.81
PALB2-201ENST00000261584 MALT1Q9UDY8 824 aa10.02□□□□□ -0.81
PALB2-201ENST00000261584 ARID1AO14497 2285 aa10.01□□□□□ -0.81
PALB2-201ENST00000261584 DOCK2Q92608 1830 aa10.01□□□□□ -0.81
PALB2-201ENST00000261584 KIAA1551Q9HCM1 1747 aa10.01□□□□□ -0.81
PALB2-201ENST00000261584 NFKBIEO00221 500 aa10.01□□□□□ -0.81
PALB2-201ENST00000261584 NDUFB5O43674 189 aa10.01□□□□□ -0.81
PALB2-201ENST00000261584 C1RP00736 705 aa10.01□□□□□ -0.81
PALB2-201ENST00000261584 ALDOCP09972 364 aaKnown RBP10.01□□□□□ -0.81
PALB2-201ENST00000261584 MATN1P21941 496 aa10.01□□□□□ -0.81
PALB2-201ENST00000261584 OPRL1P41146 370 aa10.01□□□□□ -0.81
PALB2-201ENST00000261584 CCL23P55773 120 aa10.01□□□□□ -0.81
PALB2-201ENST00000261584 OXCT1P55809 520 aa10.01□□□□□ -0.81
PALB2-201ENST00000261584 RPS24P62847 133 aaKnown RBP10.01□□□□□ -0.81
PALB2-201ENST00000261584 INCA1Q0VD86 236 aa10.01□□□□□ -0.81
PALB2-201ENST00000261584 HNRNPDQ14103 355 aaKnown RBP10.01□□□□□ -0.81
PALB2-201ENST00000261584 FAM180BQ6P0A1 224 aa10.01□□□□□ -0.81
PALB2-201ENST00000261584 ENPP6Q6UWR7 440 aa10.01□□□□□ -0.81
PALB2-201ENST00000261584 ITIH5Q86UX2 942 aa10.01□□□□□ -0.81
PALB2-201ENST00000261584 TRPV3Q8NET8 790 aa10.01□□□□□ -0.81
PALB2-201ENST00000261584 PTERQ96BW5 349 aa10.01□□□□□ -0.81
PALB2-201ENST00000261584 PRKD2Q9BZL6 878 aa10.01□□□□□ -0.81
PALB2-201ENST00000261584 ZNF696Q9H7X3 374 aa10.01□□□□□ -0.81
PALB2-201ENST00000261584 CTPS2Q9NRF8 586 aa10.01□□□□□ -0.81
PALB2-201ENST00000261584 TMLHEQ9NVH6 421 aa10.01□□□□□ -0.81
PALB2-201ENST00000261584 PDP1Q9P0J1 537 aaPredicted RBP10.01□□□□□ -0.81
PALB2-201ENST00000261584 HSFX1Q9UBD0 423 aa10.01□□□□□ -0.81
PALB2-201ENST00000261584 PCDHB3Q9Y5E6 796 aa10.01□□□□□ -0.81
PALB2-201ENST00000261584 LRP5O75197 1615 aa10.01□□□□□ -0.81
PALB2-201ENST00000261584 FUOMA2VDF0 154 aa10.01□□□□□ -0.81
PALB2-201ENST00000261584 ZBTB42B2RXF5 422 aa10.01□□□□□ -0.81
PALB2-201ENST00000261584 F5H5T6 163 aa10.01□□□□□ -0.81
PALB2-201ENST00000261584 TNPO2O14787 897 aaKnown RBP10.01□□□□□ -0.81
PALB2-201ENST00000261584 ECI2O75521 394 aa10.01□□□□□ -0.81
PALB2-201ENST00000261584 SERPINA1P01009 418 aa10.01□□□□□ -0.81
PALB2-201ENST00000261584 IDO1P14902 403 aa10.01□□□□□ -0.81
PALB2-201ENST00000261584 FSHRP23945 695 aa10.01□□□□□ -0.81
PALB2-201ENST00000261584 S100A3P33764 101 aa10.01□□□□□ -0.81
PALB2-201ENST00000261584 HNF4AP41235 474 aa10.01□□□□□ -0.81
PALB2-201ENST00000261584 NR4A2P43354 598 aa10.01□□□□□ -0.81
PALB2-201ENST00000261584 HTR6P50406 440 aa10.01□□□□□ -0.81
PALB2-201ENST00000261584 RAB25P57735 213 aa10.01□□□□□ -0.81
PALB2-201ENST00000261584 ARHGAP1Q07960 439 aa10.01□□□□□ -0.81
PALB2-201ENST00000261584 CMPK2Q5EBM0 449 aa10.01□□□□□ -0.81
PALB2-201ENST00000261584 CCNYL2Q5T2Q4 361 aa10.01□□□□□ -0.81
PALB2-201ENST00000261584 NANOGP8Q6NSW7 305 aa10.01□□□□□ -0.81
PALB2-201ENST00000261584 TPGS1Q6ZTW0 290 aa10.01□□□□□ -0.81
PALB2-201ENST00000261584 MFSD6LQ8IWD5 586 aa10.01□□□□□ -0.81
PALB2-201ENST00000261584 KRTCAP2Q8N6L1 136 aa10.01□□□□□ -0.81
PALB2-201ENST00000261584 TMEM102Q8N9M5 508 aaPredicted RBP10.01□□□□□ -0.81
PALB2-201ENST00000261584 LHPPQ9H008 270 aa10.01□□□□□ -0.81
PALB2-201ENST00000261584 IPPKQ9H8X2 491 aa10.01□□□□□ -0.81
PALB2-201ENST00000261584 NANOGQ9H9S0 305 aa10.01□□□□□ -0.81
PALB2-201ENST00000261584 CNGB3Q9NQW8 809 aa10.01□□□□□ -0.81
PALB2-201ENST00000261584 ARL15Q9NXU5 204 aa10.01□□□□□ -0.81
PALB2-201ENST00000261584 PCDH10Q9P2E7 1040 aa10.01□□□□□ -0.81
PALB2-201ENST00000261584 KRT87PA6NCN2 255 aa10.01□□□□□ -0.81
PALB2-201ENST00000261584 CLDN25C9JDP6 229 aa10.01□□□□□ -0.81
PALB2-201ENST00000261584 DPYSL4O14531 572 aa10.01□□□□□ -0.81
PALB2-201ENST00000261584 ZNF195O14628 629 aa10.01□□□□□ -0.81
PALB2-201ENST00000261584 MTX2O75431 263 aa10.01□□□□□ -0.81
PALB2-201ENST00000261584 PTNP21246 168 aa10.01□□□□□ -0.81
PALB2-201ENST00000261584 GKP32189 559 aa10.01□□□□□ -0.81
PALB2-201ENST00000261584 RCVRNP35243 200 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms