RNA–Protein interactions for RNA: ENST00000257262.12

TMEM258-201, Transcript of transmembrane protein 258, humanhuman

TSL 3

Gene TMEM258, Length 468 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM258-201ENST00000257262 ADRA1DP25100 572 aa8.41□□□□□ -1.06
TMEM258-201ENST00000257262 MC4RP32245 332 aa8.41□□□□□ -1.06
TMEM258-201ENST00000257262 HADHAP40939 763 aa8.41□□□□□ -1.06
TMEM258-201ENST00000257262 ZNF140P52738 457 aaPredicted RBP8.41□□□□□ -1.06
TMEM258-201ENST00000257262 TARDBPQ13148 414 aaKnown RBP eCLIP8.41□□□□□ -1.06
TMEM258-201ENST00000257262 SEPT6Q14141 434 aa8.41□□□□□ -1.06
TMEM258-201ENST00000257262 HLTFQ14527 1009 aaKnown RBP eCLIP8.41□□□□□ -1.06
TMEM258-201ENST00000257262 CYP1B1Q16678 543 aa8.41□□□□□ -1.06
TMEM258-201ENST00000257262 ST3GAL2Q16842 350 aa8.41□□□□□ -1.06
TMEM258-201ENST00000257262 PLA2G4EQ3MJ16 856 aa8.41□□□□□ -1.06
TMEM258-201ENST00000257262 C14orf28Q4W4Y0 310 aa8.41□□□□□ -1.06
TMEM258-201ENST00000257262 CCDC38Q502W7 563 aa8.41□□□□□ -1.06
TMEM258-201ENST00000257262 LDLRAP1Q5SW96 308 aa8.41□□□□□ -1.06
TMEM258-201ENST00000257262 GPRC6AQ5T6X5 926 aa8.41□□□□□ -1.06
TMEM258-201ENST00000257262 HES3Q5TGS1 186 aa8.41□□□□□ -1.06
TMEM258-201ENST00000257262 CCNI2Q6ZMN8 369 aaPredicted RBP8.41□□□□□ -1.06
TMEM258-201ENST00000257262 LRRTM4Q86VH4 590 aa8.41□□□□□ -1.06
TMEM258-201ENST00000257262 C17orf82Q86X59 251 aaPredicted RBP8.41□□□□□ -1.06
TMEM258-201ENST00000257262 ZNF547Q8IVP9 402 aa8.41□□□□□ -1.06
TMEM258-201ENST00000257262 C17orf53Q8N3J3 647 aaPredicted RBP8.41□□□□□ -1.06
TMEM258-201ENST00000257262 RASGEF1AQ8N9B8 481 aa8.41□□□□□ -1.06
TMEM258-201ENST00000257262 DDHD1Q8NEL9 900 aa8.41□□□□□ -1.06
TMEM258-201ENST00000257262 OR6C4Q8NGE1 309 aa8.41□□□□□ -1.06
TMEM258-201ENST00000257262 MAPK15Q8TD08 544 aa8.41□□□□□ -1.06
TMEM258-201ENST00000257262 STYXQ8WUJ0 223 aa8.41□□□□□ -1.06
TMEM258-201ENST00000257262 PATE1Q8WXA2 126 aa8.41□□□□□ -1.06
TMEM258-201ENST00000257262 CDKN2AIPNLQ96HQ2 116 aa8.41□□□□□ -1.06
TMEM258-201ENST00000257262 DNAJC1Q96KC8 554 aaKnown RBP8.41□□□□□ -1.06
TMEM258-201ENST00000257262 NAPGQ99747 312 aaPredicted RBP8.41□□□□□ -1.06
TMEM258-201ENST00000257262 C19orf43Q9BQ61 176 aa8.41□□□□□ -1.06
TMEM258-201ENST00000257262 CASS4Q9NQ75 786 aa8.41□□□□□ -1.06
TMEM258-201ENST00000257262 KCND1Q9NSA2 647 aa8.41□□□□□ -1.06
TMEM258-201ENST00000257262 KLC4Q9NSK0 619 aa8.41□□□□□ -1.06
TMEM258-201ENST00000257262 LRIT1Q9P2V4 623 aa8.41□□□□□ -1.06
TMEM258-201ENST00000257262 SLC23A2Q9UGH3 650 aa8.41□□□□□ -1.06
TMEM258-201ENST00000257262 KCNK6Q9Y257 313 aa8.41□□□□□ -1.06
TMEM258-201ENST00000257262 SAR1BQ9Y6B6 198 aa8.41□□□□□ -1.06
TMEM258-201ENST00000257262 RNF215Q9Y6U7 377 aa8.41□□□□□ -1.06
TMEM258-201ENST00000257262 SPTBN2O15020 2390 aa8.41□□□□□ -1.06
TMEM258-201ENST00000257262 AKAP13Q12802 2813 aa8.4□□□□□ -1.06
TMEM258-201ENST00000257262 TCRBV7S3A2A0A539 114 aa8.4□□□□□ -1.06
TMEM258-201ENST00000257262 HEATR9A2RTY3 570 aa8.4□□□□□ -1.06
TMEM258-201ENST00000257262 CTAGE9A4FU28 777 aa8.4□□□□□ -1.06
TMEM258-201ENST00000257262 MROH6A6NGR9 719 aa8.4□□□□□ -1.06
TMEM258-201ENST00000257262 OR2AG2A6NM03 316 aa8.4□□□□□ -1.06
TMEM258-201ENST00000257262 C1QTNF9BB2RNN3 333 aa8.4□□□□□ -1.06
TMEM258-201ENST00000257262 H7C0S8 307 aa8.4□□□□□ -1.06
TMEM258-201ENST00000257262 FANCGO15287 622 aa8.4□□□□□ -1.06
TMEM258-201ENST00000257262 SNX2O60749 519 aa8.4□□□□□ -1.06
TMEM258-201ENST00000257262 PHF2O75151 1096 aa8.4□□□□□ -1.06
TMEM258-201ENST00000257262 GAS8O95995 478 aa8.4□□□□□ -1.06
TMEM258-201ENST00000257262 MT-CO3P00414 261 aa8.4□□□□□ -1.06
TMEM258-201ENST00000257262 C1QTNF9P0C862 333 aa8.4□□□□□ -1.06
TMEM258-201ENST00000257262 PRSS56P0CW18 603 aa8.4□□□□□ -1.06
TMEM258-201ENST00000257262 ZNF7P17097 686 aaPredicted RBP8.4□□□□□ -1.06
TMEM258-201ENST00000257262 MSH3P20585 1137 aa8.4□□□□□ -1.06
TMEM258-201ENST00000257262 NPY2RP49146 381 aa8.4□□□□□ -1.06
TMEM258-201ENST00000257262 VPS41P49754 854 aa8.4□□□□□ -1.06
TMEM258-201ENST00000257262 CDKN1CP49918 316 aaPredicted RBP8.4□□□□□ -1.06
TMEM258-201ENST00000257262 MAZP56270 477 aaKnown RBP8.4□□□□□ -1.06
TMEM258-201ENST00000257262 CCL7P80098 99 aa8.4□□□□□ -1.06
TMEM258-201ENST00000257262 GPS1Q13098 491 aa8.4□□□□□ -1.06
TMEM258-201ENST00000257262 NFATC2Q13469 925 aa8.4□□□□□ -1.06
TMEM258-201ENST00000257262 GTF2H3Q13889 308 aa8.4□□□□□ -1.06
TMEM258-201ENST00000257262 INSCQ1MX18 579 aa8.4□□□□□ -1.06
TMEM258-201ENST00000257262 SKIDA1Q1XH10 827 aa8.4□□□□□ -1.06
TMEM258-201ENST00000257262 ZRANB3Q5FWF4 1079 aa8.4□□□□□ -1.06
TMEM258-201ENST00000257262 CDCP2Q5VXM1 449 aa8.4□□□□□ -1.06
TMEM258-201ENST00000257262 TMEM220Q6QAJ8 160 aa8.4□□□□□ -1.06
TMEM258-201ENST00000257262 CRTC3Q6UUV7 619 aa8.4□□□□□ -1.06
TMEM258-201ENST00000257262 SNX20Q7Z614 316 aa8.4□□□□□ -1.06
TMEM258-201ENST00000257262 C11orf96Q7Z7L8 435 aa8.4□□□□□ -1.06
TMEM258-201ENST00000257262 CREG2Q8IUH2 290 aa8.4□□□□□ -1.06
TMEM258-201ENST00000257262 ARL14Q8N4G2 192 aa8.4□□□□□ -1.06
TMEM258-201ENST00000257262 Q8N9G6 341 aaPredicted RBP8.4□□□□□ -1.06
TMEM258-201ENST00000257262 NAT14Q8WUY8 206 aa8.4□□□□□ -1.06
TMEM258-201ENST00000257262 GATA6Q92908 595 aa8.4□□□□□ -1.06
TMEM258-201ENST00000257262 NAT6Q93015 286 aa8.4□□□□□ -1.06
TMEM258-201ENST00000257262 CCDC74AQ96AQ1 378 aa8.4□□□□□ -1.06
TMEM258-201ENST00000257262 CAPZA3Q96KX2 299 aa8.4□□□□□ -1.06
TMEM258-201ENST00000257262 ZNF778Q96MU6 729 aa8.4□□□□□ -1.06
TMEM258-201ENST00000257262 RANBP9Q96S59 729 aa8.4□□□□□ -1.06
TMEM258-201ENST00000257262 EIF2B3Q9NR50 452 aaKnown RBP8.4□□□□□ -1.06
TMEM258-201ENST00000257262 CHRAC1Q9NRG0 131 aa8.4□□□□□ -1.06
TMEM258-201ENST00000257262 SMOXQ9NWM0 555 aa8.4□□□□□ -1.06
TMEM258-201ENST00000257262 TBC1D29Q9UFV1 150 aa8.4□□□□□ -1.06
TMEM258-201ENST00000257262 CLCA2Q9UQC9 943 aa8.4□□□□□ -1.06
TMEM258-201ENST00000257262 DNAJC16Q9Y2G8 782 aa8.4□□□□□ -1.06
TMEM258-201ENST00000257262 NEU2Q9Y3R4 380 aa8.4□□□□□ -1.06
TMEM258-201ENST00000257262 SLC30A1Q9Y6M5 507 aa8.4□□□□□ -1.06
TMEM258-201ENST00000257262 EPG5Q9HCE0 2579 aa8.4□□□□□ -1.07
TMEM258-201ENST00000257262 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.39□□□□□ -1.07
TMEM258-201ENST00000257262 GOLGA6L10A0A0M3HER8 536 aa8.39□□□□□ -1.07
TMEM258-201ENST00000257262 A0A1W2PQM1 296 aa8.39□□□□□ -1.07
TMEM258-201ENST00000257262 TRABD2BA6NFA1 517 aa8.39□□□□□ -1.07
TMEM258-201ENST00000257262 OR51F1A6NGY5 319 aa8.39□□□□□ -1.07
TMEM258-201ENST00000257262 PPM1DO15297 605 aa8.39□□□□□ -1.07
TMEM258-201ENST00000257262 B4GAT1O43505 415 aa8.39□□□□□ -1.07
TMEM258-201ENST00000257262 NUDT21O43809 227 aaKnown RBP8.39□□□□□ -1.07
TMEM258-201ENST00000257262 POP7O75817 140 aaKnown RBP8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms