RNA–Protein interactions for RNA: ENST00000233468.4

SF3B6-201, Transcript of splicing factor 3b subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B6, Length 770 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-201ENST00000233468 CNOT6Q9ULM6 557 aaKnown RBP11.16□□□□□ -0.62
SF3B6-201ENST00000233468 RAXQ9Y2V3 346 aa11.16□□□□□ -0.62
SF3B6-201ENST00000233468 TMEM98Q9Y2Y6 226 aa11.16□□□□□ -0.62
SF3B6-201ENST00000233468 PCDHB3Q9Y5E6 796 aa11.16□□□□□ -0.62
SF3B6-201ENST00000233468 PCDHGA1Q9Y5H4 931 aa11.16□□□□□ -0.62
SF3B6-201ENST00000233468 TRPM6Q9BX84 2022 aa11.15□□□□□ -0.62
SF3B6-201ENST00000233468 KLHL33A6NCF5 533 aa11.15□□□□□ -0.62
SF3B6-201ENST00000233468 MROH6A6NGR9 719 aa11.15□□□□□ -0.62
SF3B6-201ENST00000233468 H7C0S8 307 aa11.15□□□□□ -0.62
SF3B6-201ENST00000233468 KMOO15229 486 aa11.15□□□□□ -0.62
SF3B6-201ENST00000233468 YY2O15391 372 aa11.15□□□□□ -0.62
SF3B6-201ENST00000233468 GRID2O43424 1007 aa11.15□□□□□ -0.62
SF3B6-201ENST00000233468 SIGLEC6O43699 453 aa11.15□□□□□ -0.62
SF3B6-201ENST00000233468 NUAK1O60285 661 aa11.15□□□□□ -0.62
SF3B6-201ENST00000233468 CDK14O94921 469 aa11.15□□□□□ -0.62
SF3B6-201ENST00000233468 SLC2A4P14672 509 aa11.15□□□□□ -0.62
SF3B6-201ENST00000233468 AKT1P31749 480 aa11.15□□□□□ -0.62
SF3B6-201ENST00000233468 POLD2P49005 469 aa11.15□□□□□ -0.62
SF3B6-201ENST00000233468 SESN2P58004 480 aaPredicted RBP11.15□□□□□ -0.62
SF3B6-201ENST00000233468 CACNG1Q06432 222 aa11.15□□□□□ -0.62
SF3B6-201ENST00000233468 NFATC2Q13469 925 aa11.15□□□□□ -0.62
SF3B6-201ENST00000233468 C1orf61Q13536 156 aa11.15□□□□□ -0.62
SF3B6-201ENST00000233468 PTK6Q13882 451 aa11.15□□□□□ -0.62
SF3B6-201ENST00000233468 NR0B2Q15466 257 aa11.15□□□□□ -0.62
SF3B6-201ENST00000233468 DEFB133Q30KQ1 61 aa11.15□□□□□ -0.62
SF3B6-201ENST00000233468 PYCR3Q53H96 274 aa11.15□□□□□ -0.62
SF3B6-201ENST00000233468 SOWAHCQ53LP3 525 aaPredicted RBP11.15□□□□□ -0.62
SF3B6-201ENST00000233468 CCDC157Q569K6 752 aa11.15□□□□□ -0.62
SF3B6-201ENST00000233468 CERCAMQ5T4B2 595 aa11.15□□□□□ -0.62
SF3B6-201ENST00000233468 LYPLAL1Q5VWZ2 237 aa11.15□□□□□ -0.62
SF3B6-201ENST00000233468 MARK2Q7KZI7 788 aaKnown RBP11.15□□□□□ -0.62
SF3B6-201ENST00000233468 TMPRSS7Q7RTY8 843 aa11.15□□□□□ -0.62
SF3B6-201ENST00000233468 PDZD3Q86UT5 571 aa11.15□□□□□ -0.62
SF3B6-201ENST00000233468 PPIL6Q8IXY8 311 aa11.15□□□□□ -0.62
SF3B6-201ENST00000233468 FAM46DQ8NEK8 389 aa11.15□□□□□ -0.62
SF3B6-201ENST00000233468 DDHD1Q8NEL9 900 aa11.15□□□□□ -0.62
SF3B6-201ENST00000233468 OR13C4Q8NGS5 318 aa11.15□□□□□ -0.62
SF3B6-201ENST00000233468 GPBAR1Q8TDU6 330 aa11.15□□□□□ -0.62
SF3B6-201ENST00000233468 NAT6Q93015 286 aa11.15□□□□□ -0.62
SF3B6-201ENST00000233468 CRELD1Q96HD1 420 aa11.15□□□□□ -0.62
SF3B6-201ENST00000233468 TMEM168Q9H0V1 697 aa11.15□□□□□ -0.62
SF3B6-201ENST00000233468 OR2AG1Q9H205 316 aa11.15□□□□□ -0.62
SF3B6-201ENST00000233468 TCEAL2Q9H3H9 227 aaPredicted RBP11.15□□□□□ -0.62
SF3B6-201ENST00000233468 MRPL40Q9NQ50 206 aaKnown RBP11.15□□□□□ -0.62
SF3B6-201ENST00000233468 SAMD15Q9P1V8 674 aa11.15□□□□□ -0.62
SF3B6-201ENST00000233468 FKBPLQ9UIM3 349 aa11.15□□□□□ -0.62
SF3B6-201ENST00000233468 GPR34Q9UPC5 381 aa11.15□□□□□ -0.62
SF3B6-201ENST00000233468 NEU2Q9Y3R4 380 aa11.15□□□□□ -0.62
SF3B6-201ENST00000233468 TCAF1Q9Y4C2 921 aa11.15□□□□□ -0.62
SF3B6-201ENST00000233468 ARID1BQ8NFD5 2236 aaPredicted RBP11.15□□□□□ -0.63
SF3B6-201ENST00000233468 SDR42E2A6NKP2 422 aa11.14□□□□□ -0.63
SF3B6-201ENST00000233468 TRIM38O00635 465 aa11.14□□□□□ -0.63
SF3B6-201ENST00000233468 PFDN6O15212 129 aa11.14□□□□□ -0.63
SF3B6-201ENST00000233468 DKK1O94907 266 aa11.14□□□□□ -0.63
SF3B6-201ENST00000233468 CKMT1AP12532 417 aa11.14□□□□□ -0.63
SF3B6-201ENST00000233468 PAMP19021 973 aa11.14□□□□□ -0.63
SF3B6-201ENST00000233468 PSMA3P25788 255 aa11.14□□□□□ -0.63
SF3B6-201ENST00000233468 MC4RP32245 332 aa11.14□□□□□ -0.63
SF3B6-201ENST00000233468 CLDN6P56747 220 aa11.14□□□□□ -0.63
SF3B6-201ENST00000233468 PRAMEP78395 509 aa11.14□□□□□ -0.63
SF3B6-201ENST00000233468 TMPRSS15P98073 1019 aa11.14□□□□□ -0.63
SF3B6-201ENST00000233468 E2F1Q01094 437 aa11.14□□□□□ -0.63
SF3B6-201ENST00000233468 CYP4F3Q08477 520 aa11.14□□□□□ -0.63
SF3B6-201ENST00000233468 TMEM115Q12893 351 aaPredicted RBP11.14□□□□□ -0.63
SF3B6-201ENST00000233468 BIRC2Q13490 618 aa11.14□□□□□ -0.63
SF3B6-201ENST00000233468 KCNJ11Q14654 390 aa11.14□□□□□ -0.63
SF3B6-201ENST00000233468 WHAMMP3Q1A5X7 153 aa11.14□□□□□ -0.63
SF3B6-201ENST00000233468 ZRANB3Q5FWF4 1079 aa11.14□□□□□ -0.63
SF3B6-201ENST00000233468 AARS2Q5JTZ9 985 aaKnown RBP11.14□□□□□ -0.63
SF3B6-201ENST00000233468 TSTD2Q5T7W7 516 aa11.14□□□□□ -0.63
SF3B6-201ENST00000233468 AFTPHQ6ULP2 937 aa11.14□□□□□ -0.63
SF3B6-201ENST00000233468 TAS2R42Q7RTR8 314 aa11.14□□□□□ -0.63
SF3B6-201ENST00000233468 ADGRG6Q86SQ4 1221 aa11.14□□□□□ -0.63
SF3B6-201ENST00000233468 TRIM74Q86UV6 250 aa11.14□□□□□ -0.63
SF3B6-201ENST00000233468 LRRTM4Q86VH4 590 aa11.14□□□□□ -0.63
SF3B6-201ENST00000233468 HOOK3Q86VS8 718 aa11.14□□□□□ -0.63
SF3B6-201ENST00000233468 ARL10Q8N8L6 244 aa11.14□□□□□ -0.63
SF3B6-201ENST00000233468 AVL9Q8NBF6 648 aa11.14□□□□□ -0.63
SF3B6-201ENST00000233468 BBOF1Q8ND07 529 aa11.14□□□□□ -0.63
SF3B6-201ENST00000233468 MNS1Q8NEH6 495 aa11.14□□□□□ -0.63
SF3B6-201ENST00000233468 SPATA4Q8NEY3 305 aa11.14□□□□□ -0.63
SF3B6-201ENST00000233468 KIF18AQ8NI77 898 aa11.14□□□□□ -0.63
SF3B6-201ENST00000233468 CPT1BQ92523 772 aa11.14□□□□□ -0.63
SF3B6-201ENST00000233468 ZNF592Q92610 1267 aa11.14□□□□□ -0.63
SF3B6-201ENST00000233468 CDKN2AIPNLQ96HQ2 116 aa11.14□□□□□ -0.63
SF3B6-201ENST00000233468 DNAJC1Q96KC8 554 aaKnown RBP11.14□□□□□ -0.63
SF3B6-201ENST00000233468 APOLD1Q96LR9 279 aa11.14□□□□□ -0.63
SF3B6-201ENST00000233468 BBC3Q96PG8 261 aaPredicted RBP11.14□□□□□ -0.63
SF3B6-201ENST00000233468 COPS8Q99627 209 aa11.14□□□□□ -0.63
SF3B6-201ENST00000233468 BOCQ9BWV1 1114 aa11.14□□□□□ -0.63
SF3B6-201ENST00000233468 CLPBQ9H078 707 aa11.14□□□□□ -0.63
SF3B6-201ENST00000233468 DPEP2Q9H4A9 486 aa11.14□□□□□ -0.63
SF3B6-201ENST00000233468 SUDS3Q9H7L9 328 aaPredicted RBP11.14□□□□□ -0.63
SF3B6-201ENST00000233468 VPS37BQ9H9H4 285 aa11.14□□□□□ -0.63
SF3B6-201ENST00000233468 MRM3Q9HC36 420 aaKnown RBP11.14□□□□□ -0.63
SF3B6-201ENST00000233468 PIH1D1Q9NWS0 290 aaKnown RBP11.14□□□□□ -0.63
SF3B6-201ENST00000233468 ATXN10Q9UBB4 475 aa11.14□□□□□ -0.63
SF3B6-201ENST00000233468 CDC23Q9UJX2 597 aa11.14□□□□□ -0.63
SF3B6-201ENST00000233468 ANAPC5Q9UJX4 755 aa11.14□□□□□ -0.63
SF3B6-201ENST00000233468 KCTD3Q9Y597 815 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms