RNA–Protein interactions for RNA: ENSMUST00000041643.3

Pcif1-201, Transcript of Phosphorylated CTD-interacting factor 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcif1, Length 5,772 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcif1-201ENSMUST00000041643 RtknQ8C6B2 564 aa11.79□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Mfsd6Q8CBH5 775 aa11.79□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Trim61Q8JZK6 461 aa11.79□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Vps4aQ8VEJ9 437 aa11.79□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Arl8bQ9CQW2 186 aa11.79□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Upf1Q9EPU0 1124 aaKnown RBP11.79□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Ap3m1Q9JKC8 418 aa11.79□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Gys1Q9Z1E4 738 aaKnown RBP11.79□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Zfp651E9PZ11 729 aa11.78□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Slc9a3G3X939 829 aa11.78□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Cd160O88875 185 aa11.78□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Fcho2Q3UQN2 809 aa11.78□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Hspbap1Q8BK58 483 aa11.78□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Fam161aQ8QZV6 448 aa11.78□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Tex12Q9CR81 123 aa11.78□□□□□ -0.52
Pcif1-201ENSMUST00000041643 PudpQ9D5U5 234 aa11.78□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Gtf2h2Q9JIB4 396 aa11.78□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Myh11O08638 1972 aa11.78□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Gm3604A0A087WPN2 559 aa11.78□□□□□ -0.52
Pcif1-201ENSMUST00000041643 SpaarA0A1B0GSZ0 75 aa11.78□□□□□ -0.52
Pcif1-201ENSMUST00000041643 EXOC1LB9EK06 172 aa11.78□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Mroh5E9PUJ8 762 aa11.78□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Gsdmc2Q2KHK6 480 aa11.78□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Hdgfl2Q3UMU9 669 aa11.78□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Map3k3Q61084 626 aa11.78□□□□□ -0.52
Pcif1-201ENSMUST00000041643 TsnQ62348 228 aaKnown RBP11.78□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Znf185Q62394 352 aa11.78□□□□□ -0.52
Pcif1-201ENSMUST00000041643 BlmhQ8R016 455 aa11.78□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Olfr273Q8VG87 317 aa11.78□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Q9CQF4 240 aa11.78□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Erp27Q9D8U3 272 aa11.78□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Actrt2Q9D9L5 377 aa11.78□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Tmbim4Q9DA39 238 aa11.78□□□□□ -0.52
Pcif1-201ENSMUST00000041643 HemgnQ9ERZ0 503 aa11.78□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Msgn1Q9JK54 188 aa11.78□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Sh2d3cQ9QZS8 854 aa11.78□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Adam18Q9R157 719 aa11.78□□□□□ -0.52
Pcif1-201ENSMUST00000041643 St6galnac4Q9R2B6 360 aa11.78□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Tnk2O54967 1055 aa11.78□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Rtn2O70622 471 aa11.78□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Q32M26 199 aa11.78□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Pdap1Q3UHX2 181 aaKnown RBP11.78□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Vps72Q62481 368 aa11.78□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Sh3rf1Q69ZI1 892 aa11.78□□□□□ -0.52
Pcif1-201ENSMUST00000041643 NfascQ810U3 1240 aa11.78□□□□□ -0.52
Pcif1-201ENSMUST00000041643 UnkQ8BL48 810 aaKnown RBP11.78□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Gpihbp1Q9D1N2 228 aa11.78□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Sema4fQ9Z123 777 aa11.78□□□□□ -0.52
Pcif1-201ENSMUST00000041643 UprtB1AVZ0 310 aa11.78□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Slc4a5E9Q3M5 1116 aa11.78□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Klrb1aP27811 227 aa11.78□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Slc6a13P31649 602 aa11.78□□□□□ -0.52
Pcif1-201ENSMUST00000041643 StacP97306 403 aa11.78□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Dusp2Q05922 318 aa11.78□□□□□ -0.52
Pcif1-201ENSMUST00000041643 PmlQ60953 885 aa11.78□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Brsk2Q69Z98 735 aa11.78□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Enpp3Q6DYE8 874 aa11.78□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Q8BH50 245 aa11.78□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Snx8Q8CFD4 459 aa11.78□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Nckap1lQ8K1X4 1134 aa11.78□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Pcdhga4Q91XY4 930 aa11.78□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Trem2Q99NH8 227 aa11.78□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Glod4Q9CPV4 298 aa11.78□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Wdsub1Q9D0I6 474 aa11.78□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Rnf138rt1Q9D9M9 248 aa11.78□□□□□ -0.52
Pcif1-201ENSMUST00000041643 D7h11orf16Q9JJR6 402 aa11.78□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Gm6685D3YYP3 228 aa11.77□□□□□ -0.52
Pcif1-201ENSMUST00000041643 CflarO35732 481 aa11.77□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Cldn2O88552 230 aa11.77□□□□□ -0.52
Pcif1-201ENSMUST00000041643 EnpepP16406 945 aa11.77□□□□□ -0.52
Pcif1-201ENSMUST00000041643 UoxP25688 303 aa11.77□□□□□ -0.52
Pcif1-201ENSMUST00000041643 RabggtbP53612 339 aa11.77□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Rps7P62082 194 aaKnown RBP11.77□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Ankdd1bQ14DN9 521 aa11.77□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Nr1h4Q60641 488 aa11.77□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Olfr1418Q7TQS3 318 aa11.77□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Fstl5Q8BFR2 847 aa11.77□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Crlf2Q8CII9 359 aa11.77□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Olfr1176Q8VG40 315 aa11.77□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Traf7Q922B6 594 aa11.77□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Ttll8A4Q9F1 832 aa11.77□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Rrm2P11157 390 aa11.77□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Prox1P48437 737 aa11.77□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Faf1P54731 649 aa11.77□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Inpp5jP59644 1003 aa11.77□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Mkl2P59759 1080 aa11.77□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Ifi47Q61635 420 aa11.77□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Trit1Q80UN9 467 aa11.77□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Ubap2lQ80X50 1107 aaKnown RBP11.77□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Bdh2Q8JZV9 245 aa11.77□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Ovca2Q9D7E3 225 aa11.77□□□□□ -0.52
Pcif1-201ENSMUST00000041643 FancgQ9EQR6 623 aa11.77□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Tcea2Q9QVN7 299 aa11.77□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Igkv18-36A0A075B5M9 114 aa11.77□□□□□ -0.53
Pcif1-201ENSMUST00000041643 Fam47eD3YWC7 402 aa11.77□□□□□ -0.53
Pcif1-201ENSMUST00000041643 Vmn2r84D3YWE3 849 aa11.77□□□□□ -0.53
Pcif1-201ENSMUST00000041643 H2-Q1O19441 368 aa11.77□□□□□ -0.53
Pcif1-201ENSMUST00000041643 Cyp8b1O88962 500 aa11.77□□□□□ -0.53
Pcif1-201ENSMUST00000041643 Rpl3P27659 403 aaKnown RBP11.77□□□□□ -0.53
Pcif1-201ENSMUST00000041643 Cxcl17Q5UW37 119 aa11.77□□□□□ -0.53
Retrieved 100 of 22,080 RNA–protein pairs in 18.6 ms