RNA–Protein interactions for RNA: ENSMUST00000005394.12

Ufd1-201, Transcript of Ubiquitin recognition factor in ER-associated degradation protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ufd1, Length 1,996 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ufd1-201ENSMUST00000005394 Kcnab3P97382 249 aa11.98□□□□□ -0.49
Ufd1-201ENSMUST00000005394 Ms4a15Q3UPL6 245 aa11.98□□□□□ -0.49
Ufd1-201ENSMUST00000005394 B230104I21RikQ3USW4 141 aa11.98□□□□□ -0.49
Ufd1-201ENSMUST00000005394 Grm5Q3UVX5 1203 aa11.98□□□□□ -0.49
Ufd1-201ENSMUST00000005394 Chsy3Q5DTK1 884 aa11.98□□□□□ -0.49
Ufd1-201ENSMUST00000005394 Stmnd1Q6P3A1 279 aa11.98□□□□□ -0.49
Ufd1-201ENSMUST00000005394 Galnt10Q6P9S7 603 aa11.98□□□□□ -0.49
Ufd1-201ENSMUST00000005394 Ankrd45Q810N6 248 aa11.98□□□□□ -0.49
Ufd1-201ENSMUST00000005394 Gm6377Q8BHV4 303 aa11.98□□□□□ -0.49
Ufd1-201ENSMUST00000005394 Iars2Q8BIJ6 1012 aa11.98□□□□□ -0.49
Ufd1-201ENSMUST00000005394 Tmem209Q8BRG8 561 aaKnown RBP11.98□□□□□ -0.49
Ufd1-201ENSMUST00000005394 BpifcQ8C186 509 aa11.98□□□□□ -0.49
Ufd1-201ENSMUST00000005394 Plekhn1Q8C886 359 aa11.98□□□□□ -0.49
Ufd1-201ENSMUST00000005394 Piwil2Q8CDG1 971 aa11.98□□□□□ -0.49
Ufd1-201ENSMUST00000005394 Zswim3Q8CFL8 695 aa11.98□□□□□ -0.49
Ufd1-201ENSMUST00000005394 Mterf1aQ8CHZ9 379 aa11.98□□□□□ -0.49
Ufd1-201ENSMUST00000005394 Olfr330Q8VGD9 315 aa11.98□□□□□ -0.49
Ufd1-201ENSMUST00000005394 Mark1Q8VHJ5 795 aa11.98□□□□□ -0.49
Ufd1-201ENSMUST00000005394 Cdkal1Q91WE6 578 aa11.98□□□□□ -0.49
Ufd1-201ENSMUST00000005394 Pcdhga4Q91XY4 930 aa11.98□□□□□ -0.49
Ufd1-201ENSMUST00000005394 B4galt3Q91YY2 395 aa11.98□□□□□ -0.49
Ufd1-201ENSMUST00000005394 Nipsnap3bQ9CQE1 247 aa11.98□□□□□ -0.49
Ufd1-201ENSMUST00000005394 DtnaQ9D2N4 746 aa11.98□□□□□ -0.49
Ufd1-201ENSMUST00000005394 TrilQ9DBY4 809 aa11.98□□□□□ -0.49
Ufd1-201ENSMUST00000005394 Isca2Q9DCB8 154 aa11.98□□□□□ -0.49
Ufd1-201ENSMUST00000005394 Serpina1fQ9DCQ7 411 aa11.98□□□□□ -0.49
Ufd1-201ENSMUST00000005394 NckipsdQ9ESJ4 714 aa11.98□□□□□ -0.49
Ufd1-201ENSMUST00000005394 Pik3cgQ9JHG7 1102 aa11.98□□□□□ -0.49
Ufd1-201ENSMUST00000005394 Olfr1200A2ATJ4 336 aa11.97□□□□□ -0.49
Ufd1-201ENSMUST00000005394 Vmn2r55G3UWZ4 781 aa11.97□□□□□ -0.49
Ufd1-201ENSMUST00000005394 Sema3aO08665 772 aa11.97□□□□□ -0.49
Ufd1-201ENSMUST00000005394 RbpjlO08674 515 aa11.97□□□□□ -0.49
Ufd1-201ENSMUST00000005394 Sh3pxd2aO89032 1124 aa11.97□□□□□ -0.49
Ufd1-201ENSMUST00000005394 Ap2a2P17427 938 aaKnown RBP11.97□□□□□ -0.49
Ufd1-201ENSMUST00000005394 CtsdP18242 410 aaKnown RBP11.97□□□□□ -0.49
Ufd1-201ENSMUST00000005394 Hoxa10P31310 416 aa11.97□□□□□ -0.49
Ufd1-201ENSMUST00000005394 GemP55041 295 aa11.97□□□□□ -0.49
Ufd1-201ENSMUST00000005394 Sephs2P97364 452 aa11.97□□□□□ -0.49
Ufd1-201ENSMUST00000005394 ZbbxQ0P5X5 716 aa11.97□□□□□ -0.49
Ufd1-201ENSMUST00000005394 Gpat2Q14DK4 801 aa11.97□□□□□ -0.49
Ufd1-201ENSMUST00000005394 LcorlQ3U285 600 aa11.97□□□□□ -0.49
Ufd1-201ENSMUST00000005394 Xkr4Q5GH67 647 aa11.97□□□□□ -0.49
Ufd1-201ENSMUST00000005394 CybbQ61093 570 aa11.97□□□□□ -0.49
Ufd1-201ENSMUST00000005394 Wscd1Q80XH4 572 aa11.97□□□□□ -0.49
Ufd1-201ENSMUST00000005394 Mppe1Q80XL7 396 aa11.97□□□□□ -0.49
Ufd1-201ENSMUST00000005394 C2cd4bQ80XU5 340 aa11.97□□□□□ -0.49
Ufd1-201ENSMUST00000005394 Ckap4Q8BMK4 575 aaKnown RBP11.97□□□□□ -0.49
Ufd1-201ENSMUST00000005394 Tprg1Q8CB49 279 aa11.97□□□□□ -0.49
Ufd1-201ENSMUST00000005394 Rcor1Q8CFE3 480 aa11.97□□□□□ -0.49
Ufd1-201ENSMUST00000005394 Olfr695Q8VFM3 315 aa11.97□□□□□ -0.49
Ufd1-201ENSMUST00000005394 Pcdhb17Q91VD8 799 aa11.97□□□□□ -0.49
Ufd1-201ENSMUST00000005394 Snrnp48Q9D361 337 aa11.97□□□□□ -0.49
Ufd1-201ENSMUST00000005394 Tsga13Q9DA17 273 aa11.97□□□□□ -0.49
Ufd1-201ENSMUST00000005394 Tor1bQ9ER41 336 aa11.97□□□□□ -0.49
Ufd1-201ENSMUST00000005394 Dclk1Q9JLM8 756 aa11.97□□□□□ -0.49
Ufd1-201ENSMUST00000005394 Klhl18A0A0G2JGN5 579 aa11.96□□□□□ -0.49
Ufd1-201ENSMUST00000005394 Vmn2r-ps130A0A140T8U3 855 aa11.96□□□□□ -0.49
Ufd1-201ENSMUST00000005394 Cylc1A0A1B0GR13 642 aa11.96□□□□□ -0.49
Ufd1-201ENSMUST00000005394 Olfr1247A2AT78 314 aa11.96□□□□□ -0.49
Ufd1-201ENSMUST00000005394 Btnl4A2CG29 586 aa11.96□□□□□ -0.49
Ufd1-201ENSMUST00000005394 Fbxl18E9PYR1 771 aa11.96□□□□□ -0.49
Ufd1-201ENSMUST00000005394 Zfp607bG3X9H3 648 aa11.96□□□□□ -0.49
Ufd1-201ENSMUST00000005394 Vmn2r88L7N1W8 857 aa11.96□□□□□ -0.49
Ufd1-201ENSMUST00000005394 Chrna4O70174 629 aa11.96□□□□□ -0.49
Ufd1-201ENSMUST00000005394 MycP01108 439 aa11.96□□□□□ -0.49
Ufd1-201ENSMUST00000005394 Aldh1a1P24549 501 aa11.96□□□□□ -0.49
Ufd1-201ENSMUST00000005394 AhcyP50247 432 aa11.96□□□□□ -0.49
Ufd1-201ENSMUST00000005394 Arhgap39P59281 1107 aa11.96□□□□□ -0.49
Ufd1-201ENSMUST00000005394 Isl1P61372 349 aa11.96□□□□□ -0.49
Ufd1-201ENSMUST00000005394 Pip5k1bP70181 539 aa11.96□□□□□ -0.49
Ufd1-201ENSMUST00000005394 Tmem207P86045 143 aa11.96□□□□□ -0.49
Ufd1-201ENSMUST00000005394 B3gntl1Q3U129 357 aa11.96□□□□□ -0.49
Ufd1-201ENSMUST00000005394 Trappc3lQ4KL14 181 aa11.96□□□□□ -0.49
Ufd1-201ENSMUST00000005394 Fam169aQ5XG69 665 aa11.96□□□□□ -0.49
Ufd1-201ENSMUST00000005394 FaddQ61160 205 aa11.96□□□□□ -0.49
Ufd1-201ENSMUST00000005394 BC080695Q66JY9 481 aa11.96□□□□□ -0.49
Ufd1-201ENSMUST00000005394 Rasgrp3Q6NZH9 691 aa11.96□□□□□ -0.49
Ufd1-201ENSMUST00000005394 Dclk2Q6PGN3 756 aa11.96□□□□□ -0.49
Ufd1-201ENSMUST00000005394 Ppp2r2bQ6ZWR4 443 aa11.96□□□□□ -0.49
Ufd1-201ENSMUST00000005394 Rps27lQ6ZWY3 84 aaKnown RBP11.96□□□□□ -0.49
Ufd1-201ENSMUST00000005394 Slc6a15Q8BG16 729 aa11.96□□□□□ -0.49
Ufd1-201ENSMUST00000005394 Epb41l5Q8BGS1 731 aa11.96□□□□□ -0.49
Ufd1-201ENSMUST00000005394 Rbmx2Q8R0F5 326 aaKnown RBP11.96□□□□□ -0.49
Ufd1-201ENSMUST00000005394 Far1Q922J9 515 aa11.96□□□□□ -0.49
Ufd1-201ENSMUST00000005394 Pmf1Q9CPV5 202 aa11.96□□□□□ -0.49
Ufd1-201ENSMUST00000005394 Pih1d1Q9CQJ2 290 aa11.96□□□□□ -0.49
Ufd1-201ENSMUST00000005394 Mri1Q9CQT1 369 aa11.96□□□□□ -0.49
Ufd1-201ENSMUST00000005394 Pard3bQ9CSB4 1203 aa11.96□□□□□ -0.49
Ufd1-201ENSMUST00000005394 Plpp6Q9D4F2 292 aa11.96□□□□□ -0.49
Ufd1-201ENSMUST00000005394 Ptges3lQ9D9A7 131 aa11.96□□□□□ -0.49
Ufd1-201ENSMUST00000005394 PgdQ9DCD0 483 aa11.96□□□□□ -0.49
Ufd1-201ENSMUST00000005394 Cdc20Q9JJ66 499 aa11.96□□□□□ -0.49
Ufd1-201ENSMUST00000005394 Dnajb7Q9QYI8 312 aa11.96□□□□□ -0.49
Ufd1-201ENSMUST00000005394 Fam136b-psA0A140T8T1 138 aa11.96□□□□□ -0.5
Ufd1-201ENSMUST00000005394 Pkd2l1A2A259 760 aa11.96□□□□□ -0.5
Ufd1-201ENSMUST00000005394 Gbp4A4UUI3 631 aa11.96□□□□□ -0.5
Ufd1-201ENSMUST00000005394 Gm10720D3Z1I5 223 aa11.96□□□□□ -0.5
Ufd1-201ENSMUST00000005394 Zfp938E9Q9G3 579 aa11.96□□□□□ -0.5
Ufd1-201ENSMUST00000005394 NmbrO54799 390 aa11.96□□□□□ -0.5
Ufd1-201ENSMUST00000005394 Itgb3O54890 787 aa11.96□□□□□ -0.5
Retrieved 100 of 22,080 RNA–protein pairs in 27.2 ms