RNA–Protein interactions for RNA: ENST00000641899.1

SRRM4-204, Transcript of serine/arginine repetitive matrix 4, humanhuman

Gene SRRM4, Length 682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4-204ENST00000641899 NLGN2Q8NFZ4 835 aa21.28■■□□□ 1
SRRM4-204ENST00000641899 USP54Q70EL1 1684 aa21.28■■□□□ 1
SRRM4-204ENST00000641899 FLAD1Q8NFF5 587 aa21.27■■□□□ 1
SRRM4-204ENST00000641899 SIN3AQ96ST3 1273 aa21.27■■□□□ 1
SRRM4-204ENST00000641899 CGNL1Q0VF96 1302 aa21.27■□□□□ 0.99
SRRM4-204ENST00000641899 CD163L1Q9NR16 1453 aa21.26■□□□□ 0.99
SRRM4-204ENST00000641899 CD2APQ9Y5K6 639 aa21.24■□□□□ 0.99
SRRM4-204ENST00000641899 QSER1Q2KHR3 1735 aa21.24■□□□□ 0.99
SRRM4-204ENST00000641899 A0A1W2PP64 1363 aa21.23■□□□□ 0.99
SRRM4-204ENST00000641899 LTN1O94822 1766 aa21.23■□□□□ 0.99
SRRM4-204ENST00000641899 KCNQ4P56696 695 aa21.23■□□□□ 0.99
SRRM4-204ENST00000641899 RAPGEF4Q8WZA2 1011 aa21.23■□□□□ 0.99
SRRM4-204ENST00000641899 GPBP1L1Q9HC44 474 aaPredicted RBP21.23■□□□□ 0.99
SRRM4-204ENST00000641899 FAM208AQ9UK61 1670 aaKnown RBP21.22■□□□□ 0.99
SRRM4-204ENST00000641899 HOXC9P31274 260 aa21.22■□□□□ 0.99
SRRM4-204ENST00000641899 SMG6Q86US8 1419 aaKnown RBP21.21■□□□□ 0.99
SRRM4-204ENST00000641899 YBX3P16989 372 aaKnown RBP eCLIP21.21■□□□□ 0.99
SRRM4-204ENST00000641899 COL23A1Q86Y22 540 aaPredicted RBP21.21■□□□□ 0.99
SRRM4-204ENST00000641899 MAP3K19Q56UN5 1328 aa21.21■□□□□ 0.99
SRRM4-204ENST00000641899 KAT6BQ8WYB5 2073 aa21.2■□□□□ 0.98
SRRM4-204ENST00000641899 RTL1A6NKG5 1358 aa21.18■□□□□ 0.98
SRRM4-204ENST00000641899 NSD2O96028 1365 aa21.18■□□□□ 0.98
SRRM4-204ENST00000641899 ATP10DQ9P241 1426 aa21.18■□□□□ 0.98
SRRM4-204ENST00000641899 TATP17735 454 aaPredicted RBP21.17■□□□□ 0.98
SRRM4-204ENST00000641899 MSL1Q68DK7 614 aa21.17■□□□□ 0.98
SRRM4-204ENST00000641899 COL24A1Q17RW2 1714 aa21.16■□□□□ 0.98
SRRM4-204ENST00000641899 PCDH11XQ9BZA7 1347 aa21.15■□□□□ 0.98
SRRM4-204ENST00000641899 PCDH11YQ9BZA8 1340 aa21.15■□□□□ 0.98
SRRM4-204ENST00000641899 SMARCC1Q92922 1105 aaPredicted RBP21.15■□□□□ 0.98
SRRM4-204ENST00000641899 AK7Q96M32 723 aa21.15■□□□□ 0.98
SRRM4-204ENST00000641899 SHANK3Q9BYB0 1731 aa21.15■□□□□ 0.98
SRRM4-204ENST00000641899 NSD3Q9BZ95 1437 aa21.14■□□□□ 0.98
SRRM4-204ENST00000641899 GOLGB1Q14789 3259 aaKnown RBP21.14■□□□□ 0.97
SRRM4-204ENST00000641899 HSPA6P17066 643 aa21.13■□□□□ 0.97
SRRM4-204ENST00000641899 MEGF6O75095 1541 aa21.13■□□□□ 0.97
SRRM4-204ENST00000641899 PALLDQ8WX93 1383 aa21.12■□□□□ 0.97
SRRM4-204ENST00000641899 LY75O60449 1722 aa21.12■□□□□ 0.97
SRRM4-204ENST00000641899 DOT1LQ8TEK3 1739 aa21.12■□□□□ 0.97
SRRM4-204ENST00000641899 TONSLQ96HA7 1378 aa21.11■□□□□ 0.97
SRRM4-204ENST00000641899 NBPF6Q5VWK0 638 aa21.11■□□□□ 0.97
SRRM4-204ENST00000641899 MPRIPQ6WCQ1 1025 aa21.11■□□□□ 0.97
SRRM4-204ENST00000641899 NBPF4Q96M43 638 aa21.11■□□□□ 0.97
SRRM4-204ENST00000641899 ZNF526Q8TF50 670 aaPredicted RBP21.09■□□□□ 0.97
SRRM4-204ENST00000641899 RRS1Q15050 365 aaKnown RBP21.08■□□□□ 0.97
SRRM4-204ENST00000641899 USHBP1Q8N6Y0 703 aa21.07■□□□□ 0.96
SRRM4-204ENST00000641899 KIF24Q5T7B8 1368 aa21.07■□□□□ 0.96
SRRM4-204ENST00000641899 IGSF1Q8N6C5 1336 aa21.05■□□□□ 0.96
SRRM4-204ENST00000641899 FBLN1P23142 703 aa21.05■□□□□ 0.96
SRRM4-204ENST00000641899 SSFA2P28290 1259 aa21.05■□□□□ 0.96
SRRM4-204ENST00000641899 TUBGCP6Q96RT7 1819 aa21.05■□□□□ 0.96
SRRM4-204ENST00000641899 ADCY9O60503 1353 aa21.05■□□□□ 0.96
SRRM4-204ENST00000641899 INSRP06213 1382 aa21.05■□□□□ 0.96
SRRM4-204ENST00000641899 ST20-MTHFSA0A0A6YYL1 179 aa21.04■□□□□ 0.96
SRRM4-204ENST00000641899 PHF14O94880 888 aa21.04■□□□□ 0.96
SRRM4-204ENST00000641899 FLT4P35916 1363 aa21.04■□□□□ 0.96
SRRM4-204ENST00000641899 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.03■□□□□ 0.96
SRRM4-204ENST00000641899 FYB1O15117 783 aa21.03■□□□□ 0.96
SRRM4-204ENST00000641899 TMF1P82094 1093 aa21.03■□□□□ 0.96
SRRM4-204ENST00000641899 CDCA8Q53HL2 280 aa21.03■□□□□ 0.96
SRRM4-204ENST00000641899 TESK2Q96S53 571 aa21.03■□□□□ 0.96
SRRM4-204ENST00000641899 GGNBP2Q9H3C7 697 aa21.03■□□□□ 0.96
SRRM4-204ENST00000641899 SPG7Q9UQ90 795 aa21.03■□□□□ 0.96
SRRM4-204ENST00000641899 CEP350Q5VT06 3117 aa21.02■□□□□ 0.96
SRRM4-204ENST00000641899 HSP90AB2PQ58FF8 381 aa21.01■□□□□ 0.95
SRRM4-204ENST00000641899 C5P01031 1676 aa21.01■□□□□ 0.95
SRRM4-204ENST00000641899 CYP27B1O15528 508 aa20.99■□□□□ 0.95
SRRM4-204ENST00000641899 APLP1P51693 650 aa20.99■□□□□ 0.95
SRRM4-204ENST00000641899 LOC102724428A0A0B4J2F2 783 aa20.98■□□□□ 0.95
SRRM4-204ENST00000641899 SIK1P57059 783 aa20.98■□□□□ 0.95
SRRM4-204ENST00000641899 PIGBQ92521 554 aa20.98■□□□□ 0.95
SRRM4-204ENST00000641899 TMOD3Q9NYL9 352 aa20.98■□□□□ 0.95
SRRM4-204ENST00000641899 NKX1-1Q15270 411 aaPredicted RBP20.97■□□□□ 0.95
SRRM4-204ENST00000641899 GNPATO15228 680 aa20.96■□□□□ 0.95
SRRM4-204ENST00000641899 WWC3Q9ULE0 1092 aa20.96■□□□□ 0.95
SRRM4-204ENST00000641899 TGFB2P61812 414 aa20.95■□□□□ 0.94
SRRM4-204ENST00000641899 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.95■□□□□ 0.94
SRRM4-204ENST00000641899 C4BP0C0L5 1744 aa20.95■□□□□ 0.94
SRRM4-204ENST00000641899 KIF3CO14782 793 aa20.94■□□□□ 0.94
SRRM4-204ENST00000641899 TOMM70O94826 608 aa20.94■□□□□ 0.94
SRRM4-204ENST00000641899 ATP6V1AP38606 617 aa20.94■□□□□ 0.94
SRRM4-204ENST00000641899 PPM1GO15355 546 aaPredicted RBP20.93■□□□□ 0.94
SRRM4-204ENST00000641899 NLGN1Q8N2Q7 840 aa20.93■□□□□ 0.94
SRRM4-204ENST00000641899 MMP10P09238 476 aa20.92■□□□□ 0.94
SRRM4-204ENST00000641899 IFNL2Q8IZJ0 200 aa20.92■□□□□ 0.94
SRRM4-204ENST00000641899 LINC00116Q8NCU8 138 aa20.92■□□□□ 0.94
SRRM4-204ENST00000641899 RGPD2P0DJD1 1756 aa20.91■□□□□ 0.94
SRRM4-204ENST00000641899 TRAPPC3LQ5T215 181 aa20.91■□□□□ 0.94
SRRM4-204ENST00000641899 RTCBQ9Y3I0 505 aaKnown RBP20.91■□□□□ 0.94
SRRM4-204ENST00000641899 AMIGO3Q86WK7 504 aa20.9■□□□□ 0.94
SRRM4-204ENST00000641899 C16orf71Q8IYS4 520 aaPredicted RBP20.9■□□□□ 0.94
SRRM4-204ENST00000641899 CCDC87Q9NVE4 849 aa20.9■□□□□ 0.94
SRRM4-204ENST00000641899 BCS1LQ9Y276 419 aa20.9■□□□□ 0.94
SRRM4-204ENST00000641899 ADRA2BP18089 450 aa20.89■□□□□ 0.93
SRRM4-204ENST00000641899 ARHGAP27Q6ZUM4 889 aa20.88■□□□□ 0.93
SRRM4-204ENST00000641899 EMILIN1Q9Y6C2 1016 aa20.88■□□□□ 0.93
SRRM4-204ENST00000641899 ASAP1Q9ULH1 1129 aa20.87■□□□□ 0.93
SRRM4-204ENST00000641899 WASHC2AQ641Q2 1341 aa20.86■□□□□ 0.93
SRRM4-204ENST00000641899 TAF1LQ8IZX4 1826 aa20.86■□□□□ 0.93
SRRM4-204ENST00000641899 HSP90AB1P08238 724 aaKnown RBP20.86■□□□□ 0.93
SRRM4-204ENST00000641899 SMIM5Q71RC9 77 aa20.86■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms