RNA–Protein interactions for RNA: ENST00000641573.1

PHGDH-221, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,180 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-221ENST00000641573 SLIT3O75094 1523 aa17.23■□□□□ 0.35
PHGDH-221ENST00000641573 NFAT5O94916 1531 aa17.23■□□□□ 0.35
PHGDH-221ENST00000641573 CDCA7LQ96GN5 454 aa17.23■□□□□ 0.35
PHGDH-221ENST00000641573 RSPH6AQ9H0K4 717 aa17.23■□□□□ 0.35
PHGDH-221ENST00000641573 RRP7AQ9Y3A4 280 aaKnown RBP17.23■□□□□ 0.35
PHGDH-221ENST00000641573 CAMTA1Q9Y6Y1 1673 aa17.23■□□□□ 0.35
PHGDH-221ENST00000641573 USP19O94966 1318 aa17.22■□□□□ 0.35
PHGDH-221ENST00000641573 MAPK8IP3Q9UPT6 1336 aa17.22■□□□□ 0.35
PHGDH-221ENST00000641573 HMOX1P09601 288 aa17.22■□□□□ 0.35
PHGDH-221ENST00000641573 ZC3H6P61129 1189 aaKnown RBP17.22■□□□□ 0.35
PHGDH-221ENST00000641573 NCBP3Q53F19 620 aaKnown RBP17.22■□□□□ 0.35
PHGDH-221ENST00000641573 ZNF784Q8NCA9 323 aaPredicted RBP17.22■□□□□ 0.35
PHGDH-221ENST00000641573 RTL1A6NKG5 1358 aa17.21■□□□□ 0.35
PHGDH-221ENST00000641573 HOXC9P31274 260 aa17.21■□□□□ 0.35
PHGDH-221ENST00000641573 PRKAR2BP31323 418 aa17.21■□□□□ 0.35
PHGDH-221ENST00000641573 GCP02774 474 aa17.2■□□□□ 0.34
PHGDH-221ENST00000641573 GOLGA2Q08379 1002 aa17.2■□□□□ 0.34
PHGDH-221ENST00000641573 NEUROD2Q15784 382 aa17.2■□□□□ 0.34
PHGDH-221ENST00000641573 CPDO75976 1380 aa17.19■□□□□ 0.34
PHGDH-221ENST00000641573 NEFMP07197 916 aa17.19■□□□□ 0.34
PHGDH-221ENST00000641573 CCDC27Q2M243 656 aa17.19■□□□□ 0.34
PHGDH-221ENST00000641573 TMPOP42166 694 aaKnown RBP17.18■□□□□ 0.34
PHGDH-221ENST00000641573 WWC1Q8IX03 1113 aa17.18■□□□□ 0.34
PHGDH-221ENST00000641573 IP6K1Q92551 441 aa17.18■□□□□ 0.34
PHGDH-221ENST00000641573 SUPT16HQ9Y5B9 1047 aaKnown RBP17.18■□□□□ 0.34
PHGDH-221ENST00000641573 ZBTB7CA1YPR0 619 aa17.17■□□□□ 0.34
PHGDH-221ENST00000641573 SLFN5Q08AF3 891 aa17.17■□□□□ 0.34
PHGDH-221ENST00000641573 LTN1O94822 1766 aa17.16■□□□□ 0.34
PHGDH-221ENST00000641573 SULT6B1Q6IMI4 303 aa17.16■□□□□ 0.34
PHGDH-221ENST00000641573 LARP1Q6PKG0 1096 aaKnown RBP17.16■□□□□ 0.34
PHGDH-221ENST00000641573 ARHGEF25Q86VW2 580 aa17.16■□□□□ 0.34
PHGDH-221ENST00000641573 AEBP1Q8IUX7 1158 aa17.16■□□□□ 0.34
PHGDH-221ENST00000641573 THRAP3Q9Y2W1 955 aaKnown RBP17.16■□□□□ 0.34
PHGDH-221ENST00000641573 LMO7Q8WWI1 1683 aa17.16■□□□□ 0.34
PHGDH-221ENST00000641573 WDR63Q8IWG1 891 aa17.15■□□□□ 0.34
PHGDH-221ENST00000641573 PHACTR3Q96KR7 559 aa17.15■□□□□ 0.34
PHGDH-221ENST00000641573 OVOS2A0A0G2JMS6 1433 aa17.14■□□□□ 0.33
PHGDH-221ENST00000641573 E9PSI1 815 aa17.14■□□□□ 0.33
PHGDH-221ENST00000641573 RIPK4P57078 832 aa17.14■□□□□ 0.33
PHGDH-221ENST00000641573 NFE2L2Q16236 605 aa17.14■□□□□ 0.33
PHGDH-221ENST00000641573 IFFO2Q5TF58 517 aa17.14■□□□□ 0.33
PHGDH-221ENST00000641573 TRMT2AQ8IZ69 625 aaKnown RBP17.14■□□□□ 0.33
PHGDH-221ENST00000641573 LTV1Q96GA3 475 aaPredicted RBP17.14■□□□□ 0.33
PHGDH-221ENST00000641573 EYA1Q99502 592 aa17.14■□□□□ 0.33
PHGDH-221ENST00000641573 RGPD3A6NKT7 1758 aaPredicted RBP17.14■□□□□ 0.33
PHGDH-221ENST00000641573 RGPD4Q7Z3J3 1758 aa17.14■□□□□ 0.33
PHGDH-221ENST00000641573 IGSF1Q8N6C5 1336 aa17.14■□□□□ 0.33
PHGDH-221ENST00000641573 PLSCR1O15162 318 aa17.13■□□□□ 0.33
PHGDH-221ENST00000641573 ZBTB7AO95365 584 aa17.13■□□□□ 0.33
PHGDH-221ENST00000641573 NEFLP07196 543 aa17.13■□□□□ 0.33
PHGDH-221ENST00000641573 C1QTNF8P60827 252 aa17.13■□□□□ 0.33
PHGDH-221ENST00000641573 DUSP27Q5VZP5 1158 aa17.13■□□□□ 0.33
PHGDH-221ENST00000641573 BCL11BQ9C0K0 894 aaPredicted RBP17.13■□□□□ 0.33
PHGDH-221ENST00000641573 SPINK5Q9NQ38 1064 aaPredicted RBP17.13■□□□□ 0.33
PHGDH-221ENST00000641573 TRIM35Q9UPQ4 493 aa17.13■□□□□ 0.33
PHGDH-221ENST00000641573 ANO8Q9HCE9 1232 aaPredicted RBP17.12■□□□□ 0.33
PHGDH-221ENST00000641573 PARP4Q9UKK3 1724 aaKnown RBP17.12■□□□□ 0.33
PHGDH-221ENST00000641573 CASZ1Q86V15 1759 aa17.12■□□□□ 0.33
PHGDH-221ENST00000641573 KDRP35968 1356 aa17.11■□□□□ 0.33
PHGDH-221ENST00000641573 COL18A1P39060 1754 aa17.1■□□□□ 0.33
PHGDH-221ENST00000641573 RCAN3Q9UKA8 241 aa17.1■□□□□ 0.33
PHGDH-221ENST00000641573 FKBP8Q14318 412 aa17.09■□□□□ 0.33
PHGDH-221ENST00000641573 ATF5Q9Y2D1 282 aaPredicted RBP17.09■□□□□ 0.33
PHGDH-221ENST00000641573 DDB1Q16531 1140 aa17.08■□□□□ 0.32
PHGDH-221ENST00000641573 FHDC1Q9C0D6 1143 aaPredicted RBP17.08■□□□□ 0.32
PHGDH-221ENST00000641573 STK32BQ9NY57 414 aa17.08■□□□□ 0.32
PHGDH-221ENST00000641573 ABCC6O95255 1503 aa17.07■□□□□ 0.32
PHGDH-221ENST00000641573 CRB1P82279 1406 aa17.07■□□□□ 0.32
PHGDH-221ENST00000641573 PTGER2P43116 358 aa17.07■□□□□ 0.32
PHGDH-221ENST00000641573 ANKRD24Q8TF21 1146 aa17.07■□□□□ 0.32
PHGDH-221ENST00000641573 SYT17Q9BSW7 474 aa17.07■□□□□ 0.32
PHGDH-221ENST00000641573 PDGFDQ9GZP0 370 aaPredicted RBP17.07■□□□□ 0.32
PHGDH-221ENST00000641573 COL5A2P05997 1499 aaPredicted RBP17.06■□□□□ 0.32
PHGDH-221ENST00000641573 CHD4Q14839 1912 aa17.06■□□□□ 0.32
PHGDH-221ENST00000641573 IL16Q14005 1332 aa17.06■□□□□ 0.32
PHGDH-221ENST00000641573 RNF123Q5XPI4 1314 aa17.06■□□□□ 0.32
PHGDH-221ENST00000641573 LMOD3Q0VAK6 560 aa17.06■□□□□ 0.32
PHGDH-221ENST00000641573 NBPF6Q5VWK0 638 aa17.06■□□□□ 0.32
PHGDH-221ENST00000641573 NBPF4Q96M43 638 aa17.06■□□□□ 0.32
PHGDH-221ENST00000641573 MYH16Q9H6N6 1097 aa17.06■□□□□ 0.32
PHGDH-221ENST00000641573 AXIN2Q9Y2T1 843 aa17.06■□□□□ 0.32
PHGDH-221ENST00000641573 UTRNP46939 3433 aa17.05■□□□□ 0.32
PHGDH-221ENST00000641573 USHBP1Q8N6Y0 703 aa17.05■□□□□ 0.32
PHGDH-221ENST00000641573 LRRC37A3O60309 1634 aa17.04■□□□□ 0.32
PHGDH-221ENST00000641573 MTFR1LQ9H019 292 aa17.04■□□□□ 0.32
PHGDH-221ENST00000641573 SBF2Q86WG5 1849 aa17.04■□□□□ 0.32
PHGDH-221ENST00000641573 GIGYF1O75420 1035 aaPredicted RBP17.03■□□□□ 0.32
PHGDH-221ENST00000641573 IRX6P78412 446 aaPredicted RBP17.03■□□□□ 0.32
PHGDH-221ENST00000641573 CALD1Q05682 793 aaKnown RBP17.03■□□□□ 0.32
PHGDH-221ENST00000641573 MTHFSDQ2M296 383 aaKnown RBP17.03■□□□□ 0.32
PHGDH-221ENST00000641573 RGPD5Q99666 1765 aa17.02■□□□□ 0.32
PHGDH-221ENST00000641573 SLC15A2Q16348 729 aa17.02■□□□□ 0.32
PHGDH-221ENST00000641573 TOM1L2Q6ZVM7 507 aa17.02■□□□□ 0.32
PHGDH-221ENST00000641573 GAS2L2Q8NHY3 880 aa17.02■□□□□ 0.32
PHGDH-221ENST00000641573 ERBB3P21860 1342 aa17.01■□□□□ 0.31
PHGDH-221ENST00000641573 RRP1P56182 461 aaKnown RBP17.01■□□□□ 0.31
PHGDH-221ENST00000641573 TXNRD1Q16881 649 aa17.01■□□□□ 0.31
PHGDH-221ENST00000641573 PROM2Q8N271 834 aa17.01■□□□□ 0.31
PHGDH-221ENST00000641573 THUMPD2Q9BTF0 503 aaKnown RBP17.01■□□□□ 0.31
PHGDH-221ENST00000641573 FANCIQ9NVI1 1328 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms