RNA–Protein interactions for RNA: ENST00000640946.1

PRICKLE1-221, Transcript of prickle planar cell polarity protein 1, humanhuman

TSL 2

Gene PRICKLE1, Length 320 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE1-221ENST00000640946 RTL1A6NKG5 1358 aa10.84□□□□□ -0.67
PRICKLE1-221ENST00000640946 LTN1O94822 1766 aa10.84□□□□□ -0.67
PRICKLE1-221ENST00000640946 SMG6Q86US8 1419 aaKnown RBP10.84□□□□□ -0.67
PRICKLE1-221ENST00000640946 NHSQ6T4R5 1651 aa10.83□□□□□ -0.68
PRICKLE1-221ENST00000640946 SENP3-EIF4A1A0A087X0R7 540 aa10.83□□□□□ -0.68
PRICKLE1-221ENST00000640946 SLC15A2Q16348 729 aa10.83□□□□□ -0.68
PRICKLE1-221ENST00000640946 MORC1Q86VD1 984 aa10.83□□□□□ -0.68
PRICKLE1-221ENST00000640946 MAP2P11137 1827 aaKnown RBP10.83□□□□□ -0.68
PRICKLE1-221ENST00000640946 WDR17Q8IZU2 1322 aa10.83□□□□□ -0.68
PRICKLE1-221ENST00000640946 INSRP06213 1382 aa10.82□□□□□ -0.68
PRICKLE1-221ENST00000640946 COL24A1Q17RW2 1714 aa10.82□□□□□ -0.68
PRICKLE1-221ENST00000640946 SOX12O15370 315 aa10.82□□□□□ -0.68
PRICKLE1-221ENST00000640946 HOXC9P31274 260 aa10.82□□□□□ -0.68
PRICKLE1-221ENST00000640946 RRS1Q15050 365 aaKnown RBP10.82□□□□□ -0.68
PRICKLE1-221ENST00000640946 ERBB3P21860 1342 aa10.82□□□□□ -0.68
PRICKLE1-221ENST00000640946 FLT4P35916 1363 aa10.81□□□□□ -0.68
PRICKLE1-221ENST00000640946 MAP3K5Q99683 1374 aa10.81□□□□□ -0.68
PRICKLE1-221ENST00000640946 CC2D1BQ5T0F9 858 aaKnown RBP10.81□□□□□ -0.68
PRICKLE1-221ENST00000640946 TOM1L2Q6ZVM7 507 aa10.81□□□□□ -0.68
PRICKLE1-221ENST00000640946 MTFR1LQ9H019 292 aa10.81□□□□□ -0.68
PRICKLE1-221ENST00000640946 EMILIN1Q9Y6C2 1016 aa10.81□□□□□ -0.68
PRICKLE1-221ENST00000640946 SHANK3Q9BYB0 1731 aa10.81□□□□□ -0.68
PRICKLE1-221ENST00000640946 ZBTB7CA1YPR0 619 aa10.8□□□□□ -0.68
PRICKLE1-221ENST00000640946 AMPHP49418 695 aa10.8□□□□□ -0.68
PRICKLE1-221ENST00000640946 TNS2Q63HR2 1409 aa10.79□□□□□ -0.68
PRICKLE1-221ENST00000640946 ZNF827Q17R98 1081 aa10.79□□□□□ -0.68
PRICKLE1-221ENST00000640946 HSP90AB2PQ58FF8 381 aa10.79□□□□□ -0.68
PRICKLE1-221ENST00000640946 IFFO2Q5TF58 517 aa10.79□□□□□ -0.68
PRICKLE1-221ENST00000640946 CARD10Q9BWT7 1032 aa10.79□□□□□ -0.68
PRICKLE1-221ENST00000640946 STK32BQ9NY57 414 aa10.79□□□□□ -0.68
PRICKLE1-221ENST00000640946 BTAF1O14981 1849 aa10.79□□□□□ -0.68
PRICKLE1-221ENST00000640946 RALBP1Q15311 655 aa10.78□□□□□ -0.68
PRICKLE1-221ENST00000640946 ANKRD24Q8TF21 1146 aa10.78□□□□□ -0.68
PRICKLE1-221ENST00000640946 ARXQ96QS3 562 aa10.78□□□□□ -0.68
PRICKLE1-221ENST00000640946 TUBGCP6Q96RT7 1819 aa10.78□□□□□ -0.68
PRICKLE1-221ENST00000640946 NCAPD2Q15021 1401 aa10.77□□□□□ -0.68
PRICKLE1-221ENST00000640946 FAM208AQ9UK61 1670 aaKnown RBP10.77□□□□□ -0.69
PRICKLE1-221ENST00000640946 TNNT2P45379 298 aaPredicted RBP10.77□□□□□ -0.69
PRICKLE1-221ENST00000640946 MTHFSP49914 203 aa10.77□□□□□ -0.69
PRICKLE1-221ENST00000640946 CDCA7Q9BWT1 371 aaPredicted RBP10.77□□□□□ -0.69
PRICKLE1-221ENST00000640946 LRRC4BQ9NT99 713 aa10.77□□□□□ -0.69
PRICKLE1-221ENST00000640946 QSER1Q2KHR3 1735 aa10.77□□□□□ -0.69
PRICKLE1-221ENST00000640946 PPP2R1AP30153 589 aa10.76□□□□□ -0.69
PRICKLE1-221ENST00000640946 NBPF6Q5VWK0 638 aa10.75□□□□□ -0.69
PRICKLE1-221ENST00000640946 ACSBG1Q96GR2 724 aa10.75□□□□□ -0.69
PRICKLE1-221ENST00000640946 NBPF4Q96M43 638 aa10.75□□□□□ -0.69
PRICKLE1-221ENST00000640946 PRKRIP1Q9H875 184 aaPredicted RBP10.75□□□□□ -0.69
PRICKLE1-221ENST00000640946 EXOC5O00471 708 aa10.74□□□□□ -0.69
PRICKLE1-221ENST00000640946 PPM1GO15355 546 aaPredicted RBP10.74□□□□□ -0.69
PRICKLE1-221ENST00000640946 CSB-PGBD3P0DP91 1061 aa10.74□□□□□ -0.69
PRICKLE1-221ENST00000640946 IL13P35225 146 aa10.74□□□□□ -0.69
PRICKLE1-221ENST00000640946 EIF4A2Q14240 407 aaKnown RBP10.74□□□□□ -0.69
PRICKLE1-221ENST00000640946 AKT1S1Q96B36 256 aa10.74□□□□□ -0.69
PRICKLE1-221ENST00000640946 PLEKHG2Q9H7P9 1386 aa10.74□□□□□ -0.69
PRICKLE1-221ENST00000640946 COL3A1P02461 1466 aaPredicted RBP10.74□□□□□ -0.69
PRICKLE1-221ENST00000640946 NLGN2Q8NFZ4 835 aa10.73□□□□□ -0.69
PRICKLE1-221ENST00000640946 EYA1Q99502 592 aa10.73□□□□□ -0.69
PRICKLE1-221ENST00000640946 NLRP2Q9NX02 1062 aa10.73□□□□□ -0.69
PRICKLE1-221ENST00000640946 IGSF1Q8N6C5 1336 aa10.73□□□□□ -0.69
PRICKLE1-221ENST00000640946 LTV1Q96GA3 475 aaPredicted RBP10.72□□□□□ -0.69
PRICKLE1-221ENST00000640946 RGPD2P0DJD1 1756 aa10.72□□□□□ -0.69
PRICKLE1-221ENST00000640946 GIGYF1O75420 1035 aaPredicted RBP10.71□□□□□ -0.69
PRICKLE1-221ENST00000640946 IL2RBP14784 551 aa10.71□□□□□ -0.69
PRICKLE1-221ENST00000640946 YBX3P16989 372 aaKnown RBP eCLIP10.71□□□□□ -0.69
PRICKLE1-221ENST00000640946 KDRP35968 1356 aa10.71□□□□□ -0.69
PRICKLE1-221ENST00000640946 GPR162Q16538 588 aa10.71□□□□□ -0.69
PRICKLE1-221ENST00000640946 PNPLA7Q6ZV29 1317 aa10.71□□□□□ -0.69
PRICKLE1-221ENST00000640946 MYBBP1AQ9BQG0 1328 aaKnown RBP10.71□□□□□ -0.69
PRICKLE1-221ENST00000640946 LY75O60449 1722 aa10.7□□□□□ -0.7
PRICKLE1-221ENST00000640946 DIAPH1O60610 1272 aaKnown RBP10.7□□□□□ -0.7
PRICKLE1-221ENST00000640946 KCNQ4P56696 695 aa10.69□□□□□ -0.7
PRICKLE1-221ENST00000640946 CNGB1Q14028 1251 aaPredicted RBP10.69□□□□□ -0.7
PRICKLE1-221ENST00000640946 CFAP53Q96M91 514 aa10.69□□□□□ -0.7
PRICKLE1-221ENST00000640946 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.69□□□□□ -0.7
PRICKLE1-221ENST00000640946 DOT1LQ8TEK3 1739 aa10.67□□□□□ -0.7
PRICKLE1-221ENST00000640946 SLC16A10Q8TF71 515 aa10.67□□□□□ -0.7
PRICKLE1-221ENST00000640946 MEGF6O75095 1541 aa10.67□□□□□ -0.7
PRICKLE1-221ENST00000640946 ANP32CO43423 234 aa10.66□□□□□ -0.7
PRICKLE1-221ENST00000640946 PELP1Q8IZL8 1130 aaKnown RBP10.66□□□□□ -0.7
PRICKLE1-221ENST00000640946 KLHL34Q8N239 644 aa10.66□□□□□ -0.7
PRICKLE1-221ENST00000640946 USHBP1Q8N6Y0 703 aa10.66□□□□□ -0.7
PRICKLE1-221ENST00000640946 RAPGEF4Q8WZA2 1011 aa10.66□□□□□ -0.7
PRICKLE1-221ENST00000640946 NUDCQ9Y266 331 aa10.66□□□□□ -0.7
PRICKLE1-221ENST00000640946 ATP10DQ9P241 1426 aa10.66□□□□□ -0.7
PRICKLE1-221ENST00000640946 TATP17735 454 aaPredicted RBP10.65□□□□□ -0.7
PRICKLE1-221ENST00000640946 SLC27A3Q5K4L6 730 aa10.65□□□□□ -0.7
PRICKLE1-221ENST00000640946 SULT6B1Q6IMI4 303 aa10.65□□□□□ -0.7
PRICKLE1-221ENST00000640946 ZCRB1Q8TBF4 217 aaKnown RBP10.65□□□□□ -0.7
PRICKLE1-221ENST00000640946 ADCY9O60503 1353 aa10.65□□□□□ -0.71
PRICKLE1-221ENST00000640946 PKD1L3Q7Z443 1732 aa10.64□□□□□ -0.71
PRICKLE1-221ENST00000640946 FCHSD2O94868 740 aa10.64□□□□□ -0.71
PRICKLE1-221ENST00000640946 NKX1-1Q15270 411 aaPredicted RBP10.64□□□□□ -0.71
PRICKLE1-221ENST00000640946 AEBP1Q8IUX7 1158 aa10.64□□□□□ -0.71
PRICKLE1-221ENST00000640946 POLD1P28340 1107 aa10.63□□□□□ -0.71
PRICKLE1-221ENST00000640946 AMOTQ4VCS5 1084 aa10.63□□□□□ -0.71
PRICKLE1-221ENST00000640946 COL23A1Q86Y22 540 aaPredicted RBP10.63□□□□□ -0.71
PRICKLE1-221ENST00000640946 RSPH6AQ9H0K4 717 aa10.63□□□□□ -0.71
PRICKLE1-221ENST00000640946 TFCP2L1Q9NZI6 479 aa10.63□□□□□ -0.71
PRICKLE1-221ENST00000640946 TOGARAM1Q9Y4F4 1720 aa10.62□□□□□ -0.71
PRICKLE1-221ENST00000640946 CYP27B1O15528 508 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms