RNA–Protein interactions for RNA: ENST00000640900.1

SCARB2-225, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 531 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-225ENST00000640900 ONECUT3O60422 494 aaPredicted RBP12.13□□□□□ -0.47
SCARB2-225ENST00000640900 TOM1L2Q6ZVM7 507 aa12.13□□□□□ -0.47
SCARB2-225ENST00000640900 RUNDC1Q96C34 613 aa12.13□□□□□ -0.47
SCARB2-225ENST00000640900 PHACTR3Q96KR7 559 aa12.13□□□□□ -0.47
SCARB2-225ENST00000640900 STRN4Q9NRL3 753 aa12.13□□□□□ -0.47
SCARB2-225ENST00000640900 NLRP2Q9NX02 1062 aa12.13□□□□□ -0.47
SCARB2-225ENST00000640900 RGS17Q9UGC6 210 aaPredicted RBP12.13□□□□□ -0.47
SCARB2-225ENST00000640900 OVOS2A0A0G2JMS6 1433 aa12.12□□□□□ -0.47
SCARB2-225ENST00000640900 PKD1L3Q7Z443 1732 aa12.12□□□□□ -0.47
SCARB2-225ENST00000640900 HMOX1P09601 288 aa12.12□□□□□ -0.47
SCARB2-225ENST00000640900 CSB-PGBD3P0DP91 1061 aa12.12□□□□□ -0.47
SCARB2-225ENST00000640900 PRKAR2BP31323 418 aa12.12□□□□□ -0.47
SCARB2-225ENST00000640900 MEX3CQ5U5Q3 659 aaKnown RBP12.12□□□□□ -0.47
SCARB2-225ENST00000640900 FAM9BQ8IZU0 186 aa12.12□□□□□ -0.47
SCARB2-225ENST00000640900 TCP11L2Q8N4U5 519 aa12.12□□□□□ -0.47
SCARB2-225ENST00000640900 USHBP1Q8N6Y0 703 aa12.12□□□□□ -0.47
SCARB2-225ENST00000640900 PNNQ9H307 717 aaKnown RBP12.12□□□□□ -0.47
SCARB2-225ENST00000640900 SPINK5Q9NQ38 1064 aaPredicted RBP12.12□□□□□ -0.47
SCARB2-225ENST00000640900 GLI3P10071 1580 aa12.12□□□□□ -0.47
SCARB2-225ENST00000640900 WNK3Q9BYP7 1800 aa12.11□□□□□ -0.47
SCARB2-225ENST00000640900 THSD7AQ9UPZ6 1657 aa12.1□□□□□ -0.47
SCARB2-225ENST00000640900 NGEFQ8N5V2 710 aa12.1□□□□□ -0.47
SCARB2-225ENST00000640900 GJD4Q96KN9 370 aaPredicted RBP12.1□□□□□ -0.47
SCARB2-225ENST00000640900 CDCA7Q9BWT1 371 aaPredicted RBP12.1□□□□□ -0.47
SCARB2-225ENST00000640900 TRPC5Q9UL62 973 aaPredicted RBP12.1□□□□□ -0.47
SCARB2-225ENST00000640900 PARP4Q9UKK3 1724 aaKnown RBP12.09□□□□□ -0.47
SCARB2-225ENST00000640900 IL2RBP14784 551 aa12.09□□□□□ -0.47
SCARB2-225ENST00000640900 ZNF772Q68DY9 489 aaPredicted RBP12.09□□□□□ -0.47
SCARB2-225ENST00000640900 SHANK3Q9BYB0 1731 aa12.08□□□□□ -0.47
SCARB2-225ENST00000640900 ADAMTS7Q9UKP4 1686 aa12.08□□□□□ -0.48
SCARB2-225ENST00000640900 TMPOP42166 694 aaKnown RBP12.08□□□□□ -0.48
SCARB2-225ENST00000640900 NFE2L2Q16236 605 aa12.08□□□□□ -0.48
SCARB2-225ENST00000640900 CCDC27Q2M243 656 aa12.08□□□□□ -0.48
SCARB2-225ENST00000640900 MTHFSDQ2M296 383 aaKnown RBP12.08□□□□□ -0.48
SCARB2-225ENST00000640900 AMOTQ4VCS5 1084 aa12.08□□□□□ -0.48
SCARB2-225ENST00000640900 CCDC146Q8IYE0 955 aa12.08□□□□□ -0.48
SCARB2-225ENST00000640900 RAPGEF4Q8WZA2 1011 aa12.08□□□□□ -0.48
SCARB2-225ENST00000640900 QTRT2Q9H974 415 aaKnown RBP12.08□□□□□ -0.48
SCARB2-225ENST00000640900 ZNF521Q96K83 1311 aa12.08□□□□□ -0.48
SCARB2-225ENST00000640900 APAF1O14727 1248 aa12.07□□□□□ -0.48
SCARB2-225ENST00000640900 TATP17735 454 aaPredicted RBP12.07□□□□□ -0.48
SCARB2-225ENST00000640900 PLEKHO1Q53GL0 409 aaPredicted RBP12.07□□□□□ -0.48
SCARB2-225ENST00000640900 TNS2Q63HR2 1409 aa12.06□□□□□ -0.48
SCARB2-225ENST00000640900 NKX1-1Q15270 411 aaPredicted RBP12.06□□□□□ -0.48
SCARB2-225ENST00000640900 GAS2L2Q8NHY3 880 aa12.06□□□□□ -0.48
SCARB2-225ENST00000640900 TRIM35Q9UPQ4 493 aa12.06□□□□□ -0.48
SCARB2-225ENST00000640900 LRRC37A3O60309 1634 aa12.05□□□□□ -0.48
SCARB2-225ENST00000640900 CYP27B1O15528 508 aa12.05□□□□□ -0.48
SCARB2-225ENST00000640900 HTATSF1O43719 755 aaKnown RBP12.05□□□□□ -0.48
SCARB2-225ENST00000640900 ZCRB1Q8TBF4 217 aaKnown RBP12.05□□□□□ -0.48
SCARB2-225ENST00000640900 DLG5Q8TDM6 1919 aa12.05□□□□□ -0.48
SCARB2-225ENST00000640900 CEMIPQ8WUJ3 1361 aa12.05□□□□□ -0.48
SCARB2-225ENST00000640900 BCL9O00512 1426 aa12.04□□□□□ -0.48
SCARB2-225ENST00000640900 RBM6P78332 1123 aaKnown RBP12.04□□□□□ -0.48
SCARB2-225ENST00000640900 POTEAQ6S8J7 498 aa12.04□□□□□ -0.48
SCARB2-225ENST00000640900 USP35Q9P2H5 1018 aa12.04□□□□□ -0.48
SCARB2-225ENST00000640900 SPG7Q9UQ90 795 aa12.04□□□□□ -0.48
SCARB2-225ENST00000640900 MAPK8IP3Q9UPT6 1336 aa12.04□□□□□ -0.48
SCARB2-225ENST00000640900 PHKG2P15735 406 aa12.03□□□□□ -0.48
SCARB2-225ENST00000640900 FAM98CQ17RN3 349 aaKnown RBP12.03□□□□□ -0.48
SCARB2-225ENST00000640900 AKAP4Q5JQC9 854 aa12.03□□□□□ -0.48
SCARB2-225ENST00000640900 PCDH11XQ9BZA7 1347 aa12.03□□□□□ -0.48
SCARB2-225ENST00000640900 PCDH11YQ9BZA8 1340 aa12.03□□□□□ -0.48
SCARB2-225ENST00000640900 MAP3K5Q99683 1374 aa12.03□□□□□ -0.48
SCARB2-225ENST00000640900 RIPK4P57078 832 aa12.02□□□□□ -0.49
SCARB2-225ENST00000640900 ZNF530Q6P9A1 599 aaPredicted RBP12.02□□□□□ -0.49
SCARB2-225ENST00000640900 WWC1Q8IX03 1113 aa12.02□□□□□ -0.49
SCARB2-225ENST00000640900 ZBED9Q6R2W3 1325 aa12.02□□□□□ -0.49
SCARB2-225ENST00000640900 KDM6AO15550 1401 aaPredicted RBP12.02□□□□□ -0.49
SCARB2-225ENST00000640900 GNAT3A8MTJ3 354 aa12.01□□□□□ -0.49
SCARB2-225ENST00000640900 EXOC5O00471 708 aa12.01□□□□□ -0.49
SCARB2-225ENST00000640900 NEFMP07197 916 aa12.01□□□□□ -0.49
SCARB2-225ENST00000640900 IFNL2Q8IZJ0 200 aa12.01□□□□□ -0.49
SCARB2-225ENST00000640900 IL17REQ8NFR9 667 aa12.01□□□□□ -0.49
SCARB2-225ENST00000640900 RRP7AQ9Y3A4 280 aaKnown RBP12.01□□□□□ -0.49
SCARB2-225ENST00000640900 CCDC9Q9Y3X0 531 aaKnown RBP12.01□□□□□ -0.49
SCARB2-225ENST00000640900 MRC1P22897 1456 aa12.01□□□□□ -0.49
SCARB2-225ENST00000640900 HNRNPUQ00839 825 aaKnown RBP eCLIP12□□□□□ -0.49
SCARB2-225ENST00000640900 DDB1Q16531 1140 aa12□□□□□ -0.49
SCARB2-225ENST00000640900 WDR63Q8IWG1 891 aa12□□□□□ -0.49
SCARB2-225ENST00000640900 SEPT12Q8IYM1 358 aa12□□□□□ -0.49
SCARB2-225ENST00000640900 MARCH10Q8NA82 808 aaPredicted RBP12□□□□□ -0.49
SCARB2-225ENST00000640900 IL16Q14005 1332 aa12□□□□□ -0.49
SCARB2-225ENST00000640900 SCN11AQ9UI33 1791 aa12□□□□□ -0.49
SCARB2-225ENST00000640900 RNMTO43148 476 aaKnown RBP11.99□□□□□ -0.49
SCARB2-225ENST00000640900 HSP90AB1P08238 724 aaKnown RBP11.99□□□□□ -0.49
SCARB2-225ENST00000640900 ZNF853P0CG23 659 aa11.99□□□□□ -0.49
SCARB2-225ENST00000640900 RXRBP28702 533 aa11.99□□□□□ -0.49
SCARB2-225ENST00000640900 LMOD3Q0VAK6 560 aa11.99□□□□□ -0.49
SCARB2-225ENST00000640900 TRMT2AQ8IZ69 625 aaKnown RBP11.99□□□□□ -0.49
SCARB2-225ENST00000640900 DCAF5Q96JK2 942 aa11.99□□□□□ -0.49
SCARB2-225ENST00000640900 EP400Q96L91 3159 aa11.99□□□□□ -0.49
SCARB2-225ENST00000640900 SIPA1L3O60292 1781 aaPredicted RBP11.98□□□□□ -0.49
SCARB2-225ENST00000640900 TOGARAM1Q9Y4F4 1720 aa11.98□□□□□ -0.49
SCARB2-225ENST00000640900 RGS12O14924 1447 aa11.98□□□□□ -0.49
SCARB2-225ENST00000640900 C1orf141Q5JVX7 400 aa11.98□□□□□ -0.49
SCARB2-225ENST00000640900 LGR6Q9HBX8 967 aa11.98□□□□□ -0.49
SCARB2-225ENST00000640900 VIRMAQ69YN4 1812 aaKnown RBP11.97□□□□□ -0.49
SCARB2-225ENST00000640900 BRWD3Q6RI45 1802 aa11.97□□□□□ -0.49
SCARB2-225ENST00000640900 ERVV-2B6SEH9 535 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 83.1 ms