RNA–Protein interactions for RNA: ENST00000640568.1

TSPAN9-208, Transcript of tetraspanin 9, humanhuman

TSL 5

Gene TSPAN9, Length 1,465 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-208ENST00000640568 PNISRQ8TF01 805 aaKnown RBP28.68■■■□□ 2.18
TSPAN9-208ENST00000640568 RSPH6AQ9H0K4 717 aa28.66■■■□□ 2.18
TSPAN9-208ENST00000640568 ADAMTS8Q9UP79 889 aa28.66■■■□□ 2.18
TSPAN9-208ENST00000640568 LRRC37A3O60309 1634 aa28.66■■■□□ 2.18
TSPAN9-208ENST00000640568 PRKAR2BP31323 418 aa28.66■■■□□ 2.18
TSPAN9-208ENST00000640568 FAM9BQ8IZU0 186 aa28.66■■■□□ 2.18
TSPAN9-208ENST00000640568 OVOS2A0A0G2JMS6 1433 aa28.65■■■□□ 2.18
TSPAN9-208ENST00000640568 PKD1L3Q7Z443 1732 aa28.64■■■□□ 2.18
TSPAN9-208ENST00000640568 DDB1Q16531 1140 aa28.64■■■□□ 2.17
TSPAN9-208ENST00000640568 PLEKHG2Q9H7P9 1386 aa28.63■■■□□ 2.17
TSPAN9-208ENST00000640568 MAPK8IP3Q9UPT6 1336 aa28.62■■■□□ 2.17
TSPAN9-208ENST00000640568 EXOC5O00471 708 aa28.62■■■□□ 2.17
TSPAN9-208ENST00000640568 ONECUT3O60422 494 aaPredicted RBP28.62■■■□□ 2.17
TSPAN9-208ENST00000640568 SEPT12Q8IYM1 358 aa28.62■■■□□ 2.17
TSPAN9-208ENST00000640568 PLEKHO1Q53GL0 409 aaPredicted RBP28.61■■■□□ 2.17
TSPAN9-208ENST00000640568 TNS2Q63HR2 1409 aa28.61■■■□□ 2.17
TSPAN9-208ENST00000640568 BRWD3Q6RI45 1802 aa28.61■■■□□ 2.17
TSPAN9-208ENST00000640568 AMOTQ4VCS5 1084 aa28.6■■■□□ 2.17
TSPAN9-208ENST00000640568 ZCRB1Q8TBF4 217 aaKnown RBP28.6■■■□□ 2.17
TSPAN9-208ENST00000640568 SPG7Q9UQ90 795 aa28.6■■■□□ 2.17
TSPAN9-208ENST00000640568 SHANK3Q9BYB0 1731 aa28.59■■■□□ 2.17
TSPAN9-208ENST00000640568 CCDC146Q8IYE0 955 aa28.59■■■□□ 2.17
TSPAN9-208ENST00000640568 RGS12O14924 1447 aa28.59■■■□□ 2.17
TSPAN9-208ENST00000640568 PDE3BQ13370 1112 aa28.58■■■□□ 2.17
TSPAN9-208ENST00000640568 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP28.58■■■□□ 2.17
TSPAN9-208ENST00000640568 PCDH11XQ9BZA7 1347 aa28.56■■■□□ 2.16
TSPAN9-208ENST00000640568 PCDH11YQ9BZA8 1340 aa28.56■■■□□ 2.16
TSPAN9-208ENST00000640568 RUNDC1Q96C34 613 aa28.56■■■□□ 2.16
TSPAN9-208ENST00000640568 PLEKHF1Q96S99 279 aa28.55■■■□□ 2.16
TSPAN9-208ENST00000640568 GAS2L2Q8NHY3 880 aa28.54■■■□□ 2.16
TSPAN9-208ENST00000640568 DDX54Q8TDD1 881 aaKnown RBP28.54■■■□□ 2.16
TSPAN9-208ENST00000640568 ZNF530Q6P9A1 599 aaPredicted RBP28.53■■■□□ 2.16
TSPAN9-208ENST00000640568 PHACTR3Q96KR7 559 aa28.53■■■□□ 2.16
TSPAN9-208ENST00000640568 C1orf141Q5JVX7 400 aa28.53■■■□□ 2.16
TSPAN9-208ENST00000640568 MTHFSDQ2M296 383 aaKnown RBP28.52■■■□□ 2.16
TSPAN9-208ENST00000640568 DLG5Q8TDM6 1919 aa28.51■■■□□ 2.15
TSPAN9-208ENST00000640568 KRT27Q7Z3Y8 459 aa28.5■■■□□ 2.15
TSPAN9-208ENST00000640568 IFNL2Q8IZJ0 200 aa28.5■■■□□ 2.15
TSPAN9-208ENST00000640568 VIRMAQ69YN4 1812 aaKnown RBP28.49■■■□□ 2.15
TSPAN9-208ENST00000640568 KAT6BQ8WYB5 2073 aa28.48■■■□□ 2.15
TSPAN9-208ENST00000640568 CYP27B1O15528 508 aa28.46■■■□□ 2.15
TSPAN9-208ENST00000640568 PHKG2P15735 406 aa28.46■■■□□ 2.15
TSPAN9-208ENST00000640568 AKAP4Q5JQC9 854 aa28.46■■■□□ 2.15
TSPAN9-208ENST00000640568 NFE2L2Q16236 605 aa28.46■■■□□ 2.15
TSPAN9-208ENST00000640568 MARCH10Q8NA82 808 aaPredicted RBP28.46■■■□□ 2.15
TSPAN9-208ENST00000640568 HSP90AB1P08238 724 aaKnown RBP28.45■■■□□ 2.14
TSPAN9-208ENST00000640568 APAF1O14727 1248 aa28.44■■■□□ 2.14
TSPAN9-208ENST00000640568 MAP3K5Q99683 1374 aa28.44■■■□□ 2.14
TSPAN9-208ENST00000640568 GNAT3A8MTJ3 354 aa28.42■■■□□ 2.14
TSPAN9-208ENST00000640568 TMPOP42166 694 aaKnown RBP28.42■■■□□ 2.14
TSPAN9-208ENST00000640568 NEUROD2Q15784 382 aa28.42■■■□□ 2.14
TSPAN9-208ENST00000640568 RIPK4P57078 832 aa28.41■■■□□ 2.14
TSPAN9-208ENST00000640568 RTF1Q92541 710 aaKnown RBP28.41■■■□□ 2.14
TSPAN9-208ENST00000640568 RRP7AQ9Y3A4 280 aaKnown RBP28.41■■■□□ 2.14
TSPAN9-208ENST00000640568 SCN11AQ9UI33 1791 aa28.41■■■□□ 2.14
TSPAN9-208ENST00000640568 DOT1LQ8TEK3 1739 aa28.41■■■□□ 2.14
TSPAN9-208ENST00000640568 FAM182BQ5T319 152 aa28.4■■■□□ 2.14
TSPAN9-208ENST00000640568 LMOD3Q0VAK6 560 aa28.39■■■□□ 2.13
TSPAN9-208ENST00000640568 NKX1-1Q15270 411 aaPredicted RBP28.38■■■□□ 2.13
TSPAN9-208ENST00000640568 MPRIPQ6WCQ1 1025 aa28.38■■■□□ 2.13
TSPAN9-208ENST00000640568 DCAF5Q96JK2 942 aa28.38■■■□□ 2.13
TSPAN9-208ENST00000640568 SBF2Q86WG5 1849 aa28.38■■■□□ 2.13
TSPAN9-208ENST00000640568 FAM196AQ6ZSG2 479 aa28.37■■■□□ 2.13
TSPAN9-208ENST00000640568 SENP3-EIF4A1A0A087X0R7 540 aa28.36■■■□□ 2.13
TSPAN9-208ENST00000640568 TOGARAM1Q9Y4F4 1720 aa28.36■■■□□ 2.13
TSPAN9-208ENST00000640568 HTATSF1O43719 755 aaKnown RBP28.35■■■□□ 2.13
TSPAN9-208ENST00000640568 ITGB4P16144 1822 aa28.35■■■□□ 2.13
TSPAN9-208ENST00000640568 BCL9O00512 1426 aa28.34■■■□□ 2.13
TSPAN9-208ENST00000640568 KDM6AO15550 1401 aaPredicted RBP28.34■■■□□ 2.13
TSPAN9-208ENST00000640568 ADAMTS7Q9UKP4 1686 aa28.33■■■□□ 2.13
TSPAN9-208ENST00000640568 RNMTO43148 476 aaKnown RBP28.33■■■□□ 2.13
TSPAN9-208ENST00000640568 ACSBG1Q96GR2 724 aa28.33■■■□□ 2.13
TSPAN9-208ENST00000640568 SALL2Q9Y467 1007 aaPredicted RBP28.33■■■□□ 2.13
TSPAN9-208ENST00000640568 NHSQ6T4R5 1651 aa28.32■■■□□ 2.12
TSPAN9-208ENST00000640568 SYTL4Q96C24 671 aaPredicted RBP28.32■■■□□ 2.12
TSPAN9-208ENST00000640568 MCM10Q7L590 875 aa28.31■■■□□ 2.12
TSPAN9-208ENST00000640568 LGR6Q9HBX8 967 aa28.31■■■□□ 2.12
TSPAN9-208ENST00000640568 DCTN1Q14203 1278 aa28.3■■■□□ 2.12
TSPAN9-208ENST00000640568 ERVV-2B6SEH9 535 aa28.29■■■□□ 2.12
TSPAN9-208ENST00000640568 TEFQ10587 303 aa28.29■■■□□ 2.12
TSPAN9-208ENST00000640568 NGEFQ8N5V2 710 aa28.29■■■□□ 2.12
TSPAN9-208ENST00000640568 CABP4P57796 275 aa28.28■■■□□ 2.12
TSPAN9-208ENST00000640568 IL17REQ8NFR9 667 aa28.28■■■□□ 2.12
TSPAN9-208ENST00000640568 NCBP3Q53F19 620 aaKnown RBP28.27■■■□□ 2.12
TSPAN9-208ENST00000640568 TRIM35Q9UPQ4 493 aa28.27■■■□□ 2.12
TSPAN9-208ENST00000640568 PRIM1P49642 420 aaKnown RBP28.27■■■□□ 2.12
TSPAN9-208ENST00000640568 HNRNPUQ00839 825 aaKnown RBP eCLIP28.27■■■□□ 2.12
TSPAN9-208ENST00000640568 TMOD3Q9NYL9 352 aa28.27■■■□□ 2.12
TSPAN9-208ENST00000640568 CEMIPQ8WUJ3 1361 aa28.26■■■□□ 2.11
TSPAN9-208ENST00000640568 EP400Q96L91 3159 aa28.26■■■□□ 2.11
TSPAN9-208ENST00000640568 SIPA1L3O60292 1781 aaPredicted RBP28.26■■■□□ 2.11
TSPAN9-208ENST00000640568 CCDC27Q2M243 656 aa28.26■■■□□ 2.11
TSPAN9-208ENST00000640568 MRC1P22897 1456 aa28.25■■■□□ 2.11
TSPAN9-208ENST00000640568 SLC52A2Q9HAB3 445 aa28.25■■■□□ 2.11
TSPAN9-208ENST00000640568 THUMPD2Q9BTF0 503 aaKnown RBP28.24■■■□□ 2.11
TSPAN9-208ENST00000640568 BTAF1O14981 1849 aa28.23■■■□□ 2.11
TSPAN9-208ENST00000640568 TRIM37O94972 964 aa28.23■■■□□ 2.11
TSPAN9-208ENST00000640568 KCNQ2O43526 872 aa28.22■■■□□ 2.11
TSPAN9-208ENST00000640568 CALD1Q05682 793 aaKnown RBP28.22■■■□□ 2.11
TSPAN9-208ENST00000640568 NFATC2IPQ8NCF5 419 aa28.22■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms