RNA–Protein interactions for RNA: ENST00000640440.1

HNRNPU-229, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 3

Gene HNRNPU, Length 871 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-229ENST00000640440 EMILIN1Q9Y6C2 1016 aa19.9■□□□□ 0.78
HNRNPU-229ENST00000640440 ANO8Q9HCE9 1232 aaPredicted RBP19.89■□□□□ 0.77
HNRNPU-229ENST00000640440 TXNRD1Q16881 649 aa19.88■□□□□ 0.77
HNRNPU-229ENST00000640440 CASZ1Q86V15 1759 aa19.88■□□□□ 0.77
HNRNPU-229ENST00000640440 PPM1GO15355 546 aaPredicted RBP19.87■□□□□ 0.77
HNRNPU-229ENST00000640440 ZCRB1Q8TBF4 217 aaKnown RBP19.86■□□□□ 0.77
HNRNPU-229ENST00000640440 PANK3Q9H999 370 aa19.86■□□□□ 0.77
HNRNPU-229ENST00000640440 RAPGEF4Q8WZA2 1011 aa19.85■□□□□ 0.77
HNRNPU-229ENST00000640440 PAPPAQ13219 1627 aa19.84■□□□□ 0.77
HNRNPU-229ENST00000640440 PKD1L3Q7Z443 1732 aa19.83■□□□□ 0.77
HNRNPU-229ENST00000640440 TNNT2P45379 298 aaPredicted RBP19.83■□□□□ 0.77
HNRNPU-229ENST00000640440 TATP17735 454 aaPredicted RBP19.82■□□□□ 0.76
HNRNPU-229ENST00000640440 SYTL4Q96C24 671 aaPredicted RBP19.82■□□□□ 0.76
HNRNPU-229ENST00000640440 STK32BQ9NY57 414 aa19.82■□□□□ 0.76
HNRNPU-229ENST00000640440 WASHC2AQ641Q2 1341 aa19.81■□□□□ 0.76
HNRNPU-229ENST00000640440 POLKQ9UBT6 870 aa19.81■□□□□ 0.76
HNRNPU-229ENST00000640440 LY75O60449 1722 aa19.81■□□□□ 0.76
HNRNPU-229ENST00000640440 PRIM1P49642 420 aaKnown RBP19.8■□□□□ 0.76
HNRNPU-229ENST00000640440 ITGB4P16144 1822 aa19.8■□□□□ 0.76
HNRNPU-229ENST00000640440 NCAPD2Q15021 1401 aa19.79■□□□□ 0.76
HNRNPU-229ENST00000640440 PDGFDQ9GZP0 370 aaPredicted RBP19.79■□□□□ 0.76
HNRNPU-229ENST00000640440 SPON1Q9HCB6 807 aa19.79■□□□□ 0.76
HNRNPU-229ENST00000640440 NSD2O96028 1365 aa19.79■□□□□ 0.76
HNRNPU-229ENST00000640440 PCDH11XQ9BZA7 1347 aa19.78■□□□□ 0.76
HNRNPU-229ENST00000640440 PCDH11YQ9BZA8 1340 aa19.78■□□□□ 0.76
HNRNPU-229ENST00000640440 SLC15A2Q16348 729 aa19.78■□□□□ 0.76
HNRNPU-229ENST00000640440 TOGARAM1Q9Y4F4 1720 aa19.78■□□□□ 0.76
HNRNPU-229ENST00000640440 TUBGCP6Q96RT7 1819 aa19.77■□□□□ 0.76
HNRNPU-229ENST00000640440 KIF7Q2M1P5 1343 aa19.76■□□□□ 0.75
HNRNPU-229ENST00000640440 EYA1Q99502 592 aa19.76■□□□□ 0.75
HNRNPU-229ENST00000640440 ZBTB7AO95365 584 aa19.75■□□□□ 0.75
HNRNPU-229ENST00000640440 LRRC4BQ9NT99 713 aa19.75■□□□□ 0.75
HNRNPU-229ENST00000640440 QSER1Q2KHR3 1735 aa19.75■□□□□ 0.75
HNRNPU-229ENST00000640440 EIF4A2Q14240 407 aaKnown RBP19.74■□□□□ 0.75
HNRNPU-229ENST00000640440 PPP1R1BQ9UD71 204 aaPredicted RBP19.74■□□□□ 0.75
HNRNPU-229ENST00000640440 KNSTRNQ9Y448 316 aa19.74■□□□□ 0.75
HNRNPU-229ENST00000640440 CYP27B1O15528 508 aa19.73■□□□□ 0.75
HNRNPU-229ENST00000640440 ZNF827Q17R98 1081 aa19.73■□□□□ 0.75
HNRNPU-229ENST00000640440 MORC1Q86VD1 984 aa19.73■□□□□ 0.75
HNRNPU-229ENST00000640440 KCNQ4P56696 695 aa19.72■□□□□ 0.75
HNRNPU-229ENST00000640440 SLC27A3Q5K4L6 730 aa19.72■□□□□ 0.75
HNRNPU-229ENST00000640440 TAF1LQ8IZX4 1826 aa19.71■□□□□ 0.75
HNRNPU-229ENST00000640440 SPG7Q9UQ90 795 aa19.7■□□□□ 0.74
HNRNPU-229ENST00000640440 ATF5Q9Y2D1 282 aaPredicted RBP19.7■□□□□ 0.74
HNRNPU-229ENST00000640440 C5P01031 1676 aa19.69■□□□□ 0.74
HNRNPU-229ENST00000640440 AMER1Q5JTC6 1135 aaPredicted RBP19.68■□□□□ 0.74
HNRNPU-229ENST00000640440 MPRIPQ6WCQ1 1025 aa19.68■□□□□ 0.74
HNRNPU-229ENST00000640440 AKT1S1Q96B36 256 aa19.68■□□□□ 0.74
HNRNPU-229ENST00000640440 CCNL1Q9UK58 526 aaPredicted RBP19.68■□□□□ 0.74
HNRNPU-229ENST00000640440 PTGER2P43116 358 aa19.67■□□□□ 0.74
HNRNPU-229ENST00000640440 MTFR1LQ9H019 292 aa19.67■□□□□ 0.74
HNRNPU-229ENST00000640440 IGSF1Q8N6C5 1336 aa19.67■□□□□ 0.74
HNRNPU-229ENST00000640440 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.66■□□□□ 0.742e-19■■■■□ 21.7
HNRNPU-229ENST00000640440 PALLDQ8WX93 1383 aa19.65■□□□□ 0.74
HNRNPU-229ENST00000640440 NKX1-1Q15270 411 aaPredicted RBP19.64■□□□□ 0.73
HNRNPU-229ENST00000640440 TFCP2L1Q9NZI6 479 aa19.64■□□□□ 0.73
HNRNPU-229ENST00000640440 PNPLA7Q6ZV29 1317 aa19.63■□□□□ 0.73
HNRNPU-229ENST00000640440 COL24A1Q17RW2 1714 aa19.62■□□□□ 0.73
HNRNPU-229ENST00000640440 PLEKHG2Q9H7P9 1386 aa19.62■□□□□ 0.73
HNRNPU-229ENST00000640440 PHKG2P15735 406 aa19.62■□□□□ 0.73
HNRNPU-229ENST00000640440 IFNL2Q8IZJ0 200 aa19.62■□□□□ 0.73
HNRNPU-229ENST00000640440 PIGBQ92521 554 aa19.62■□□□□ 0.73
HNRNPU-229ENST00000640440 PER1O15534 1290 aaPredicted RBP19.61■□□□□ 0.73
HNRNPU-229ENST00000640440 CC2D1BQ5T0F9 858 aaKnown RBP19.61■□□□□ 0.73
HNRNPU-229ENST00000640440 AEBP1Q8IUX7 1158 aa19.61■□□□□ 0.73
HNRNPU-229ENST00000640440 VIRMAQ69YN4 1812 aaKnown RBP19.6■□□□□ 0.73
HNRNPU-229ENST00000640440 C4BP0C0L5 1744 aa19.6■□□□□ 0.73
HNRNPU-229ENST00000640440 SMARCC1Q92922 1105 aaPredicted RBP19.6■□□□□ 0.73
HNRNPU-229ENST00000640440 SGIP1Q9BQI5 828 aa19.6■□□□□ 0.73
HNRNPU-229ENST00000640440 UBR3Q6ZT12 1888 aa19.59■□□□□ 0.73
HNRNPU-229ENST00000640440 TMOD3Q9NYL9 352 aa19.59■□□□□ 0.73
HNRNPU-229ENST00000640440 IL13P35225 146 aa19.58■□□□□ 0.72
HNRNPU-229ENST00000640440 PLEKHO1Q53GL0 409 aaPredicted RBP19.58■□□□□ 0.72
HNRNPU-229ENST00000640440 MTHFSP49914 203 aa19.57■□□□□ 0.72
HNRNPU-229ENST00000640440 CNGB1Q14028 1251 aaPredicted RBP19.57■□□□□ 0.72
HNRNPU-229ENST00000640440 SULT6B1Q6IMI4 303 aa19.57■□□□□ 0.72
HNRNPU-229ENST00000640440 ZNF530Q6P9A1 599 aaPredicted RBP19.57■□□□□ 0.72
HNRNPU-229ENST00000640440 SLC16A10Q8TF71 515 aa19.56■□□□□ 0.72
HNRNPU-229ENST00000640440 FHDC1Q9C0D6 1143 aaPredicted RBP19.56■□□□□ 0.72
HNRNPU-229ENST00000640440 SCN11AQ9UI33 1791 aa19.56■□□□□ 0.72
HNRNPU-229ENST00000640440 KDRP35968 1356 aa19.56■□□□□ 0.72
HNRNPU-229ENST00000640440 AMOTQ4VCS5 1084 aa19.55■□□□□ 0.72
HNRNPU-229ENST00000640440 ARXQ96QS3 562 aa19.55■□□□□ 0.72
HNRNPU-229ENST00000640440 ASAP1Q9ULH1 1129 aa19.55■□□□□ 0.72
HNRNPU-229ENST00000640440 KDM6AO15550 1401 aaPredicted RBP19.54■□□□□ 0.72
HNRNPU-229ENST00000640440 MSH5O43196 834 aa19.54■□□□□ 0.72
HNRNPU-229ENST00000640440 HSP90AB1P08238 724 aaKnown RBP19.54■□□□□ 0.72
HNRNPU-229ENST00000640440 COL23A1Q86Y22 540 aaPredicted RBP19.54■□□□□ 0.72
HNRNPU-229ENST00000640440 NPC1L1Q9UHC9 1359 aa19.54■□□□□ 0.72
HNRNPU-229ENST00000640440 LOC102724428A0A0B4J2F2 783 aa19.53■□□□□ 0.72
HNRNPU-229ENST00000640440 DCAF8L1A6NGE4 600 aa19.53■□□□□ 0.72
HNRNPU-229ENST00000640440 HMGB2P26583 209 aaKnown RBP19.53■□□□□ 0.72
HNRNPU-229ENST00000640440 POLD1P28340 1107 aa19.53■□□□□ 0.72
HNRNPU-229ENST00000640440 SIK1P57059 783 aa19.53■□□□□ 0.72
HNRNPU-229ENST00000640440 DCAF5Q96JK2 942 aa19.53■□□□□ 0.72
HNRNPU-229ENST00000640440 SYT17Q9BSW7 474 aa19.53■□□□□ 0.72
HNRNPU-229ENST00000640440 C1orf141Q5JVX7 400 aa19.52■□□□□ 0.72
HNRNPU-229ENST00000640440 AK7Q96M32 723 aa19.52■□□□□ 0.72
HNRNPU-229ENST00000640440 ERVV-2B6SEH9 535 aa19.51■□□□□ 0.71
HNRNPU-229ENST00000640440 ATG3Q9NT62 314 aa19.51■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms