RNA–Protein interactions for RNA: ENST00000640287.1

PAX6-268, Transcript of paired box 6, humanhuman

TSL 1 (best)

Gene PAX6, Length 1,485 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-268ENST00000640287 WDR43Q15061 677 aaKnown RBP eCLIP20.3■□□□□ 0.84
PAX6-268ENST00000640287 MRS2Q9HD23 443 aa20.3■□□□□ 0.84
PAX6-268ENST00000640287 KDRP35968 1356 aa20.3■□□□□ 0.84
PAX6-268ENST00000640287 TNS2Q63HR2 1409 aa20.29■□□□□ 0.84
PAX6-268ENST00000640287 ILDR2Q71H61 639 aa20.29■□□□□ 0.84
PAX6-268ENST00000640287 ZCRB1Q8TBF4 217 aaKnown RBP20.29■□□□□ 0.84
PAX6-268ENST00000640287 DDX54Q8TDD1 881 aaKnown RBP20.28■□□□□ 0.84
PAX6-268ENST00000640287 CCDC184Q52MB2 194 aa20.27■□□□□ 0.84
PAX6-268ENST00000640287 SPG7Q9UQ90 795 aa20.27■□□□□ 0.84
PAX6-268ENST00000640287 BRWD3Q6RI45 1802 aa20.26■□□□□ 0.83
PAX6-268ENST00000640287 PRKAR2BP31323 418 aa20.25■□□□□ 0.83
PAX6-268ENST00000640287 PLEKHO1Q53GL0 409 aaPredicted RBP20.25■□□□□ 0.83
PAX6-268ENST00000640287 FAM182BQ5T319 152 aa20.25■□□□□ 0.83
PAX6-268ENST00000640287 PCDH11XQ9BZA7 1347 aa20.25■□□□□ 0.83
PAX6-268ENST00000640287 PCDH11YQ9BZA8 1340 aa20.25■□□□□ 0.83
PAX6-268ENST00000640287 RSPH6AQ9H0K4 717 aa20.24■□□□□ 0.83
PAX6-268ENST00000640287 FCHSD2O94868 740 aa20.24■□□□□ 0.83
PAX6-268ENST00000640287 NEFMP07197 916 aa20.24■□□□□ 0.83
PAX6-268ENST00000640287 AMOTQ4VCS5 1084 aa20.24■□□□□ 0.83
PAX6-268ENST00000640287 MARCH10Q8NA82 808 aaPredicted RBP20.24■□□□□ 0.83
PAX6-268ENST00000640287 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.23■□□□□ 0.83
PAX6-268ENST00000640287 PLEKHG2Q9H7P9 1386 aa20.22■□□□□ 0.83
PAX6-268ENST00000640287 PNNQ9H307 717 aaKnown RBP20.22■□□□□ 0.83
PAX6-268ENST00000640287 ZNF530Q6P9A1 599 aaPredicted RBP20.21■□□□□ 0.83
PAX6-268ENST00000640287 MIER1Q8N108 512 aa20.21■□□□□ 0.83
PAX6-268ENST00000640287 PKD1L3Q7Z443 1732 aa20.2■□□□□ 0.82
PAX6-268ENST00000640287 MAPK8IP3Q9UPT6 1336 aa20.2■□□□□ 0.82
PAX6-268ENST00000640287 C1orf141Q5JVX7 400 aa20.19■□□□□ 0.82
PAX6-268ENST00000640287 FAM196AQ6ZSG2 479 aa20.19■□□□□ 0.82
PAX6-268ENST00000640287 ADAMTS8Q9UP79 889 aa20.19■□□□□ 0.82
PAX6-268ENST00000640287 CYP27B1O15528 508 aa20.18■□□□□ 0.82
PAX6-268ENST00000640287 IFNL2Q8IZJ0 200 aa20.18■□□□□ 0.82
PAX6-268ENST00000640287 SHANK3Q9BYB0 1731 aa20.18■□□□□ 0.82
PAX6-268ENST00000640287 CCER2I3L3R5 266 aa20.18■□□□□ 0.82
PAX6-268ENST00000640287 MTHFSDQ2M296 383 aaKnown RBP20.18■□□□□ 0.82
PAX6-268ENST00000640287 PHACTR3Q96KR7 559 aa20.18■□□□□ 0.82
PAX6-268ENST00000640287 EP400Q96L91 3159 aa20.17■□□□□ 0.82
PAX6-268ENST00000640287 PHKG2P15735 406 aa20.17■□□□□ 0.82
PAX6-268ENST00000640287 CCDC146Q8IYE0 955 aa20.17■□□□□ 0.82
PAX6-268ENST00000640287 GAS2L2Q8NHY3 880 aa20.17■□□□□ 0.82
PAX6-268ENST00000640287 PNISRQ8TF01 805 aaKnown RBP20.17■□□□□ 0.82
PAX6-268ENST00000640287 FAM9BQ8IZU0 186 aa20.15■□□□□ 0.82
PAX6-268ENST00000640287 PLEKHF1Q96S99 279 aa20.15■□□□□ 0.82
PAX6-268ENST00000640287 HSP90AB1P08238 724 aaKnown RBP20.14■□□□□ 0.81
PAX6-268ENST00000640287 ACSBG1Q96GR2 724 aa20.14■□□□□ 0.81
PAX6-268ENST00000640287 AKAP4Q5JQC9 854 aa20.13■□□□□ 0.81
PAX6-268ENST00000640287 SYTL4Q96C24 671 aaPredicted RBP20.13■□□□□ 0.81
PAX6-268ENST00000640287 RUNDC1Q96C34 613 aa20.12■□□□□ 0.81
PAX6-268ENST00000640287 TRIM37O94972 964 aa20.11■□□□□ 0.81
PAX6-268ENST00000640287 MPRIPQ6WCQ1 1025 aa20.11■□□□□ 0.81
PAX6-268ENST00000640287 BCL9O00512 1426 aa20.11■□□□□ 0.81
PAX6-268ENST00000640287 NKX1-1Q15270 411 aaPredicted RBP20.11■□□□□ 0.81
PAX6-268ENST00000640287 DCAF5Q96JK2 942 aa20.11■□□□□ 0.81
PAX6-268ENST00000640287 MAP3K5Q99683 1374 aa20.1■□□□□ 0.81
PAX6-268ENST00000640287 GNAT3A8MTJ3 354 aa20.1■□□□□ 0.81
PAX6-268ENST00000640287 SF3B2Q13435 895 aaKnown RBP20.1■□□□□ 0.81
PAX6-268ENST00000640287 PRIM1P49642 420 aaKnown RBP20.09■□□□□ 0.81
PAX6-268ENST00000640287 KCNQ2O43526 872 aa20.08■□□□□ 0.81
PAX6-268ENST00000640287 NFE2L2Q16236 605 aa20.08■□□□□ 0.81
PAX6-268ENST00000640287 RTF1Q92541 710 aaKnown RBP20.08■□□□□ 0.81
PAX6-268ENST00000640287 DOT1LQ8TEK3 1739 aa20.07■□□□□ 0.8
PAX6-268ENST00000640287 NEUROD2Q15784 382 aa20.07■□□□□ 0.8
PAX6-268ENST00000640287 BCL11BQ9C0K0 894 aaPredicted RBP20.07■□□□□ 0.8
PAX6-268ENST00000640287 RRP7AQ9Y3A4 280 aaKnown RBP20.07■□□□□ 0.8
PAX6-268ENST00000640287 KDM6AO15550 1401 aaPredicted RBP20.06■□□□□ 0.8
PAX6-268ENST00000640287 KAT6BQ8WYB5 2073 aa20.06■□□□□ 0.8
PAX6-268ENST00000640287 UPF1Q92900 1129 aaKnown RBP eCLIP20.05■□□□□ 0.8
PAX6-268ENST00000640287 NHSQ6T4R5 1651 aa20.05■□□□□ 0.8
PAX6-268ENST00000640287 RNMTO43148 476 aaKnown RBP20.05■□□□□ 0.8
PAX6-268ENST00000640287 TMPOP42166 694 aaKnown RBP20.05■□□□□ 0.8
PAX6-268ENST00000640287 RIPK4P57078 832 aa20.05■□□□□ 0.8
PAX6-268ENST00000640287 CABP4P57796 275 aa20.05■□□□□ 0.8
PAX6-268ENST00000640287 PTF1AQ7RTS3 328 aa20.05■□□□□ 0.8
PAX6-268ENST00000640287 CCDC125Q86Z20 511 aa20.05■□□□□ 0.8
PAX6-268ENST00000640287 LGR6Q9HBX8 967 aa20.05■□□□□ 0.8
PAX6-268ENST00000640287 TMOD3Q9NYL9 352 aa20.05■□□□□ 0.8
PAX6-268ENST00000640287 SBF2Q86WG5 1849 aa20.04■□□□□ 0.8
PAX6-268ENST00000640287 ERVV-2B6SEH9 535 aa20.04■□□□□ 0.8
PAX6-268ENST00000640287 APAF1O14727 1248 aa20.04■□□□□ 0.8
PAX6-268ENST00000640287 APBA3O96018 575 aa20.04■□□□□ 0.8
PAX6-268ENST00000640287 TOGARAM1Q9Y4F4 1720 aa20.04■□□□□ 0.8
PAX6-268ENST00000640287 MCM10Q7L590 875 aa20.03■□□□□ 0.8
PAX6-268ENST00000640287 SENP3-EIF4A1A0A087X0R7 540 aa20.02■□□□□ 0.8
PAX6-268ENST00000640287 HTATSF1O43719 755 aaKnown RBP20.02■□□□□ 0.8
PAX6-268ENST00000640287 LMOD3Q0VAK6 560 aa20.02■□□□□ 0.8
PAX6-268ENST00000640287 TEFQ10587 303 aa20.01■□□□□ 0.79
PAX6-268ENST00000640287 DCTN1Q14203 1278 aa20.01■□□□□ 0.79
PAX6-268ENST00000640287 IL17REQ8NFR9 667 aa20.01■□□□□ 0.79
PAX6-268ENST00000640287 BAG6P46379 1132 aa20■□□□□ 0.79
PAX6-268ENST00000640287 NFATC2IPQ8NCF5 419 aa20■□□□□ 0.79
PAX6-268ENST00000640287 PIGBQ92521 554 aa20■□□□□ 0.79
PAX6-268ENST00000640287 SOCS7O14512 581 aa19.99■□□□□ 0.79
PAX6-268ENST00000640287 SLC52A2Q9HAB3 445 aa19.99■□□□□ 0.79
PAX6-268ENST00000640287 SCN11AQ9UI33 1791 aa19.99■□□□□ 0.79
PAX6-268ENST00000640287 TNS1Q9HBL0 1735 aaKnown RBP19.99■□□□□ 0.79
PAX6-268ENST00000640287 DLG5Q8TDM6 1919 aa19.98■□□□□ 0.79
PAX6-268ENST00000640287 ITGB4P16144 1822 aa19.98■□□□□ 0.79
PAX6-268ENST00000640287 BTAF1O14981 1849 aa19.97■□□□□ 0.79
PAX6-268ENST00000640287 DEFB132Q7Z7B7 95 aa19.97■□□□□ 0.79
PAX6-268ENST00000640287 THUMPD2Q9BTF0 503 aaKnown RBP19.97■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 103.7 ms