RNA–Protein interactions for RNA: ENST00000639487.1

RTTN-215, Transcript of rotatin, humanhuman

TSL 5

Gene RTTN, Length 3,175 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-215ENST00000639487 PNNQ9H307 717 aaKnown RBP9.04□□□□□ -0.96
RTTN-215ENST00000639487 ZNF428Q96B54 188 aa9.03□□□□□ -0.96
RTTN-215ENST00000639487 IL13P35225 146 aa9.03□□□□□ -0.96
RTTN-215ENST00000639487 MYH13Q9UKX3 1938 aa9.02□□□□□ -0.96
RTTN-215ENST00000639487 ZNF326Q5BKZ1 582 aaKnown RBP9.02□□□□□ -0.97
RTTN-215ENST00000639487 ARXQ96QS3 562 aa9.02□□□□□ -0.97
RTTN-215ENST00000639487 PODXL2Q9NZ53 605 aa9.02□□□□□ -0.97
RTTN-215ENST00000639487 TICAM2Q86XR7 235 aa9.02□□□□□ -0.97
RTTN-215ENST00000639487 RGS17Q9UGC6 210 aaPredicted RBP9.02□□□□□ -0.97
RTTN-215ENST00000639487 RTL9Q8NET4 1388 aa9.02□□□□□ -0.97
RTTN-215ENST00000639487 STAG3Q9UJ98 1225 aa9.01□□□□□ -0.97
RTTN-215ENST00000639487 TRPC5Q9UL62 973 aaPredicted RBP9.01□□□□□ -0.97
RTTN-215ENST00000639487 AMOTQ4VCS5 1084 aa9.01□□□□□ -0.97
RTTN-215ENST00000639487 RC3H1Q5TC82 1133 aaKnown RBP9.01□□□□□ -0.97
RTTN-215ENST00000639487 CNTNAP4Q9C0A0 1308 aa9□□□□□ -0.97
RTTN-215ENST00000639487 MYH7P12883 1935 aa9□□□□□ -0.97
RTTN-215ENST00000639487 HSPA2P54652 639 aa9□□□□□ -0.97
RTTN-215ENST00000639487 MLECQ14165 292 aa9□□□□□ -0.97
RTTN-215ENST00000639487 ERVV-2B6SEH9 535 aa9□□□□□ -0.97
RTTN-215ENST00000639487 RBM6P78332 1123 aaKnown RBP9□□□□□ -0.97
RTTN-215ENST00000639487 ST20-MTHFSA0A0A6YYL1 179 aa9□□□□□ -0.97
RTTN-215ENST00000639487 HOXC9P31274 260 aa8.99□□□□□ -0.97
RTTN-215ENST00000639487 RANGAP1P46060 587 aaPredicted RBP8.99□□□□□ -0.97
RTTN-215ENST00000639487 CDK5RAP2Q96SN8 1893 aa8.99□□□□□ -0.97
RTTN-215ENST00000639487 FRMPD3Q5JV73 1810 aa8.99□□□□□ -0.97
RTTN-215ENST00000639487 SIN3AQ96ST3 1273 aa8.98□□□□□ -0.97
RTTN-215ENST00000639487 PDZRN3Q9UPQ7 1066 aa8.98□□□□□ -0.97
RTTN-215ENST00000639487 HSP90AB1P08238 724 aaKnown RBP8.98□□□□□ -0.97
RTTN-215ENST00000639487 ZNF853P0CG23 659 aa8.98□□□□□ -0.97
RTTN-215ENST00000639487 SLC27A3Q5K4L6 730 aa8.98□□□□□ -0.97
RTTN-215ENST00000639487 PCDH11XQ9BZA7 1347 aa8.97□□□□□ -0.97
RTTN-215ENST00000639487 PCDH11YQ9BZA8 1340 aa8.97□□□□□ -0.97
RTTN-215ENST00000639487 AK9Q5TCS8 1911 aa8.97□□□□□ -0.97
RTTN-215ENST00000639487 GREB1LQ9C091 1923 aaPredicted RBP8.97□□□□□ -0.97
RTTN-215ENST00000639487 CHMP4AQ9BY43 222 aa8.97□□□□□ -0.97
RTTN-215ENST00000639487 FCHSD2O94868 740 aa8.97□□□□□ -0.97
RTTN-215ENST00000639487 FOXD1Q16676 465 aa8.96□□□□□ -0.98
RTTN-215ENST00000639487 RGL3Q3MIN7 710 aa8.96□□□□□ -0.98
RTTN-215ENST00000639487 SLC26A8Q96RN1 970 aa8.96□□□□□ -0.98
RTTN-215ENST00000639487 TAOK2Q9UL54 1235 aa8.96□□□□□ -0.98
RTTN-215ENST00000639487 MMP14P50281 582 aa8.95□□□□□ -0.98
RTTN-215ENST00000639487 WAPLQ7Z5K2 1190 aa8.95□□□□□ -0.98
RTTN-215ENST00000639487 A0A0G2JMZ2 1700 aa8.95□□□□□ -0.98
RTTN-215ENST00000639487 GCP02774 474 aa8.94□□□□□ -0.98
RTTN-215ENST00000639487 ADRA2BP18089 450 aa8.94□□□□□ -0.98
RTTN-215ENST00000639487 POLKQ9UBT6 870 aa8.94□□□□□ -0.98
RTTN-215ENST00000639487 CENPBP07199 599 aaPredicted RBP8.94□□□□□ -0.98
RTTN-215ENST00000639487 HSPA1LP34931 641 aa8.94□□□□□ -0.98
RTTN-215ENST00000639487 TMED8Q6PL24 325 aaPredicted RBP8.93□□□□□ -0.98
RTTN-215ENST00000639487 AAMPQ13685 434 aa8.92□□□□□ -0.98
RTTN-215ENST00000639487 PNISRQ8TF01 805 aaKnown RBP8.92□□□□□ -0.98
RTTN-215ENST00000639487 RSPH6AQ9H0K4 717 aa8.92□□□□□ -0.98
RTTN-215ENST00000639487 POGKQ9P215 609 aa8.92□□□□□ -0.98
RTTN-215ENST00000639487 GJD4Q96KN9 370 aaPredicted RBP8.91□□□□□ -0.98
RTTN-215ENST00000639487 MYT1LQ9UL68 1186 aa8.91□□□□□ -0.98
RTTN-215ENST00000639487 COL1A1P02452 1464 aaPredicted RBP8.91□□□□□ -0.98
RTTN-215ENST00000639487 COL2A1P02458 1487 aaPredicted RBP8.91□□□□□ -0.98
RTTN-215ENST00000639487 SLX4Q8IY92 1834 aa8.91□□□□□ -0.98
RTTN-215ENST00000639487 UBE2Q2Q8WVN8 375 aa8.91□□□□□ -0.98
RTTN-215ENST00000639487 CCDC88AQ3V6T2 1871 aa8.9□□□□□ -0.98
RTTN-215ENST00000639487 TRPM7Q96QT4 1865 aa8.9□□□□□ -0.98
RTTN-215ENST00000639487 AK7Q96M32 723 aa8.9□□□□□ -0.98
RTTN-215ENST00000639487 ZNF236Q9UL36 1845 aa8.9□□□□□ -0.98
RTTN-215ENST00000639487 TCP11L2Q8N4U5 519 aa8.9□□□□□ -0.98
RTTN-215ENST00000639487 BCL11BQ9C0K0 894 aaPredicted RBP8.9□□□□□ -0.98
RTTN-215ENST00000639487 SSC5DA1L4H1 1573 aa8.9□□□□□ -0.99
RTTN-215ENST00000639487 WDR63Q8IWG1 891 aa8.89□□□□□ -0.99
RTTN-215ENST00000639487 NGLY1Q96IV0 654 aa8.89□□□□□ -0.99
RTTN-215ENST00000639487 CABP1Q9NZU7 370 aa8.89□□□□□ -0.99
RTTN-215ENST00000639487 PDE3BQ13370 1112 aa8.89□□□□□ -0.99
RTTN-215ENST00000639487 GRIPAP1Q4V328 841 aa8.89□□□□□ -0.99
RTTN-215ENST00000639487 TMEM132EQ6IEE7 984 aa8.89□□□□□ -0.99
RTTN-215ENST00000639487 VPS33BQ9H267 617 aa8.89□□□□□ -0.99
RTTN-215ENST00000639487 AKAP4Q5JQC9 854 aa8.89□□□□□ -0.99
RTTN-215ENST00000639487 COG3Q96JB2 828 aa8.89□□□□□ -0.99
RTTN-215ENST00000639487 ORAI2Q96SN7 254 aa8.89□□□□□ -0.99
RTTN-215ENST00000639487 KLRG2A4D1S0 409 aaPredicted RBP8.88□□□□□ -0.99
RTTN-215ENST00000639487 UTYO14607 1347 aa8.88□□□□□ -0.99
RTTN-215ENST00000639487 TRAK1Q9UPV9 953 aa8.88□□□□□ -0.99
RTTN-215ENST00000639487 KIF16BQ96L93 1317 aa8.88□□□□□ -0.99
RTTN-215ENST00000639487 UBAP1LF5GYI3 381 aa8.87□□□□□ -0.99
RTTN-215ENST00000639487 PPP2R1AP30153 589 aa8.87□□□□□ -0.99
RTTN-215ENST00000639487 ADCY9O60503 1353 aa8.87□□□□□ -0.99
RTTN-215ENST00000639487 CARMIL3Q8ND23 1372 aa8.87□□□□□ -0.99
RTTN-215ENST00000639487 PARP14Q460N5 1801 aa8.87□□□□□ -0.99
RTTN-215ENST00000639487 FAM83GA6ND36 823 aa8.87□□□□□ -0.99
RTTN-215ENST00000639487 SLC16A10Q8TF71 515 aa8.86□□□□□ -0.99
RTTN-215ENST00000639487 NECTIN2Q92692 538 aa8.86□□□□□ -0.99
RTTN-215ENST00000639487 TULP1O00294 542 aaPredicted RBP8.86□□□□□ -0.99
RTTN-215ENST00000639487 LMOD3Q0VAK6 560 aa8.86□□□□□ -0.99
RTTN-215ENST00000639487 PRKRIP1Q9H875 184 aaPredicted RBP8.86□□□□□ -0.99
RTTN-215ENST00000639487 AFF2P51816 1311 aa8.85□□□□□ -0.99
RTTN-215ENST00000639487 AKT1S1Q96B36 256 aa8.85□□□□□ -0.99
RTTN-215ENST00000639487 LRP10Q7Z4F1 713 aa8.85□□□□□ -0.99
RTTN-215ENST00000639487 FAM196AQ6ZSG2 479 aa8.84□□□□□ -0.99
RTTN-215ENST00000639487 FLAD1Q8NFF5 587 aa8.84□□□□□ -0.99
RTTN-215ENST00000639487 SMARCC1Q92922 1105 aaPredicted RBP8.84□□□□□ -0.99
RTTN-215ENST00000639487 ZNF316A6NFI3 1004 aaPredicted RBP8.84□□□□□ -0.99
RTTN-215ENST00000639487 CALD1Q05682 793 aaKnown RBP8.84□□□□□ -0.99
RTTN-215ENST00000639487 DCAF5Q96JK2 942 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms