RNA–Protein interactions for RNA: ENST00000639240.1

ATM-228, Transcript of ATM serine/threonine kinase, humanhuman

TSL 5 BASIC

Gene ATM, Length 498 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-228ENST00000639240 GSK3AP49840 483 aa7□□□□□ -1.29
ATM-228ENST00000639240 ERVK-9P63128 1117 aa6.99□□□□□ -1.29
ATM-228ENST00000639240 NR1H3Q13133 447 aa6.99□□□□□ -1.29
ATM-228ENST00000639240 WHAMMQ8TF30 809 aa6.99□□□□□ -1.29
ATM-228ENST00000639240 RHOQP17081 205 aa6.98□□□□□ -1.29
ATM-228ENST00000639240 RNF144AP50876 292 aaPredicted RBP6.98□□□□□ -1.29
ATM-228ENST00000639240 TMEM132AQ24JP5 1023 aa6.98□□□□□ -1.29
ATM-228ENST00000639240 PRICKLE2Q7Z3G6 844 aa6.98□□□□□ -1.29
ATM-228ENST00000639240 KRTAP9-2Q9BYQ4 174 aa6.98□□□□□ -1.29
ATM-228ENST00000639240 A0A1W2PRU2 124 aa6.97□□□□□ -1.29
ATM-228ENST00000639240 SOCS7O14512 581 aa6.97□□□□□ -1.29
ATM-228ENST00000639240 TSGA10IPQ3SY00 556 aa6.97□□□□□ -1.29
ATM-228ENST00000639240 OSBPL3Q9H4L5 887 aa6.97□□□□□ -1.29
ATM-228ENST00000639240 KRTAP9-6A0A140TA67 174 aa6.96□□□□□ -1.3
ATM-228ENST00000639240 CDC14CA4D256 554 aa6.96□□□□□ -1.3
ATM-228ENST00000639240 ATP5J2-PTCD1G3V325 749 aa6.96□□□□□ -1.3
ATM-228ENST00000639240 TRAK2O60296 914 aa6.96□□□□□ -1.3
ATM-228ENST00000639240 ZNF385CQ66K41 422 aaPredicted RBP6.96□□□□□ -1.3
ATM-228ENST00000639240 LYSMD3Q7Z3D4 306 aa6.96□□□□□ -1.3
ATM-228ENST00000639240 CDCA7Q9BWT1 371 aaPredicted RBP6.96□□□□□ -1.3
ATM-228ENST00000639240 IRF5Q13568 498 aa6.95□□□□□ -1.3
ATM-228ENST00000639240 GAS6Q14393 721 aa6.95□□□□□ -1.3
ATM-228ENST00000639240 CC2D2BQ6DHV5 1058 aa6.95□□□□□ -1.3
ATM-228ENST00000639240 CCDC85AQ96PX6 553 aaPredicted RBP6.95□□□□□ -1.3
ATM-228ENST00000639240 TBC1D2BQ9UPU7 963 aa6.95□□□□□ -1.3
ATM-228ENST00000639240 NDUFB9Q9Y6M9 179 aa6.95□□□□□ -1.3
ATM-228ENST00000639240 SLURP2P0DP57 97 aa6.94□□□□□ -1.3
ATM-228ENST00000639240 SV2AQ7L0J3 742 aa6.94□□□□□ -1.3
ATM-228ENST00000639240 KCTD17Q8N5Z5 321 aa6.94□□□□□ -1.3
ATM-228ENST00000639240 GRIP2Q9C0E4 1043 aa6.94□□□□□ -1.3
ATM-228ENST00000639240 MEN1O00255 615 aa6.93□□□□□ -1.3
ATM-228ENST00000639240 POU4F2Q12837 409 aa6.93□□□□□ -1.3
ATM-228ENST00000639240 DBN1Q16643 649 aa6.93□□□□□ -1.3
ATM-228ENST00000639240 CEP126Q9P2H0 1117 aa6.93□□□□□ -1.3
ATM-228ENST00000639240 PCDHB11Q9Y5F2 797 aa6.93□□□□□ -1.3
ATM-228ENST00000639240 ARHGEF15O94989 841 aa6.92□□□□□ -1.3
ATM-228ENST00000639240 KRTAP1-3Q8IUG1 177 aa6.92□□□□□ -1.3
ATM-228ENST00000639240 PHTF2Q8N3S3 785 aa6.92□□□□□ -1.3
ATM-228ENST00000639240 ADAMTS8Q9UP79 889 aa6.92□□□□□ -1.3
ATM-228ENST00000639240 STAU1O95793 577 aaKnown RBP6.91□□□□□ -1.3
ATM-228ENST00000639240 THBS1P07996 1170 aa6.91□□□□□ -1.3
ATM-228ENST00000639240 GPC1P35052 558 aa6.91□□□□□ -1.3
ATM-228ENST00000639240 CLN3Q13286 438 aa6.91□□□□□ -1.3
ATM-228ENST00000639240 RNF20Q5VTR2 975 aa6.91□□□□□ -1.3
ATM-228ENST00000639240 ZNF837Q96EG3 531 aaPredicted RBP6.91□□□□□ -1.3
ATM-228ENST00000639240 ARHGEF10LQ9HCE6 1279 aa6.91□□□□□ -1.3
ATM-228ENST00000639240 RAB6BQ9NRW1 208 aa6.91□□□□□ -1.3
ATM-228ENST00000639240 HRH3Q9Y5N1 445 aa6.91□□□□□ -1.3
ATM-228ENST00000639240 GPR25O00155 361 aa6.9□□□□□ -1.3
ATM-228ENST00000639240 IL2RAP01589 272 aa6.9□□□□□ -1.3
ATM-228ENST00000639240 MCCD1P59942 119 aaPredicted RBP6.9□□□□□ -1.3
ATM-228ENST00000639240 KCNMA1Q12791 1236 aa6.9□□□□□ -1.3
ATM-228ENST00000639240 LYPD4Q6UWN0 246 aa6.9□□□□□ -1.3
ATM-228ENST00000639240 CCDC125Q86Z20 511 aa6.89□□□□□ -1.31
ATM-228ENST00000639240 SPATA31C2B4DYI2 1134 aa6.88□□□□□ -1.31
ATM-228ENST00000639240 ADAMTS2O95450 1211 aa6.88□□□□□ -1.31
ATM-228ENST00000639240 NBPF10Q6P3W6 841 aaKnown RBP6.88□□□□□ -1.31
ATM-228ENST00000639240 CYP2U1Q7Z449 544 aa6.88□□□□□ -1.31
ATM-228ENST00000639240 TRIM22Q8IYM9 498 aa6.88□□□□□ -1.31
ATM-228ENST00000639240 NBPF15Q8N660 670 aa6.88□□□□□ -1.31
ATM-228ENST00000639240 SVOPQ8N4V2 548 aa6.87□□□□□ -1.31
ATM-228ENST00000639240 CNKSR1Q969H4 720 aa6.87□□□□□ -1.31
ATM-228ENST00000639240 GDPD2Q9HCC8 539 aa6.87□□□□□ -1.31
ATM-228ENST00000639240 CHIC2Q9UKJ5 165 aa6.87□□□□□ -1.31
ATM-228ENST00000639240 DYRK1BQ9Y463 629 aa6.87□□□□□ -1.31
ATM-228ENST00000639240 CENPCQ03188 943 aa6.86□□□□□ -1.31
ATM-228ENST00000639240 VAC14Q08AM6 782 aa6.86□□□□□ -1.31
ATM-228ENST00000639240 SLC27A3Q5K4L6 730 aa6.86□□□□□ -1.31
ATM-228ENST00000639240 RIPOR1Q6ZS17 1223 aa6.86□□□□□ -1.31
ATM-228ENST00000639240 NLRP3Q96P20 1036 aa6.86□□□□□ -1.31
ATM-228ENST00000639240 PSMG3-AS1Q96PY0 264 aa6.86□□□□□ -1.31
ATM-228ENST00000639240 GAS2L1Q99501 681 aaPredicted RBP6.86□□□□□ -1.31
ATM-228ENST00000639240 ESYT1Q9BSJ8 1104 aa6.86□□□□□ -1.31
ATM-228ENST00000639240 FHDC1Q9C0D6 1143 aaPredicted RBP6.86□□□□□ -1.31
ATM-228ENST00000639240 ZNF330Q9Y3S2 320 aaPredicted RBP6.86□□□□□ -1.31
ATM-228ENST00000639240 GNRH1P01148 92 aa6.85□□□□□ -1.31
ATM-228ENST00000639240 CELA2BP08218 269 aaPredicted RBP6.85□□□□□ -1.31
ATM-228ENST00000639240 SRSF11Q05519 484 aaKnown RBP6.85□□□□□ -1.31
ATM-228ENST00000639240 GTPBP3Q969Y2 492 aaKnown RBP6.85□□□□□ -1.31
ATM-228ENST00000639240 XAGE2Q96GT9 111 aa6.85□□□□□ -1.31
ATM-228ENST00000639240 RASSF7Q02833 373 aa6.84□□□□□ -1.31
ATM-228ENST00000639240 UBAP2LQ14157 1087 aaKnown RBP6.84□□□□□ -1.31
ATM-228ENST00000639240 APBB1O00213 710 aa6.83□□□□□ -1.32
ATM-228ENST00000639240 WASLO00401 505 aaPredicted RBP6.83□□□□□ -1.32
ATM-228ENST00000639240 PHKA2P46019 1235 aa6.83□□□□□ -1.32
ATM-228ENST00000639240 WDR44Q5JSH3 913 aa6.83□□□□□ -1.32
ATM-228ENST00000639240 ETNK1Q9HBU6 452 aa6.83□□□□□ -1.32
ATM-228ENST00000639240 TIMMDC1Q9NPL8 285 aa6.83□□□□□ -1.32
ATM-228ENST00000639240 IGF1RP08069 1367 aa6.82□□□□□ -1.32
ATM-228ENST00000639240 TAS1R3Q7RTX0 852 aa6.82□□□□□ -1.32
ATM-228ENST00000639240 TRIM52Q96A61 297 aa6.82□□□□□ -1.32
ATM-228ENST00000639240 GMCL1Q96IK5 515 aa6.82□□□□□ -1.32
ATM-228ENST00000639240 MBIPQ9NS73 344 aa6.82□□□□□ -1.32
ATM-228ENST00000639240 F11P03951 625 aa6.81□□□□□ -1.32
ATM-228ENST00000639240 ABL2P42684 1182 aa6.81□□□□□ -1.32
ATM-228ENST00000639240 SCNN1DP51172 638 aa6.81□□□□□ -1.32
ATM-228ENST00000639240 EIF4G2P78344 907 aaKnown RBP eCLIP6.81□□□□□ -1.32
ATM-228ENST00000639240 MCM6Q14566 821 aa6.81□□□□□ -1.32
ATM-228ENST00000639240 C4orf17Q53FE4 359 aa6.81□□□□□ -1.32
ATM-228ENST00000639240 ZNF592Q92610 1267 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms