RNA–Protein interactions for RNA: ENST00000638878.1

PAX6-242, Transcript of paired box 6, humanhuman

TSL 5

Gene PAX6, Length 1,369 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-242ENST00000638878 FAM208AQ9UK61 1670 aaKnown RBP13.21□□□□□ -0.29
PAX6-242ENST00000638878 BCL9O00512 1426 aa13.21□□□□□ -0.3
PAX6-242ENST00000638878 PLEKHG2Q9H7P9 1386 aa13.2□□□□□ -0.3
PAX6-242ENST00000638878 DDB1Q16531 1140 aa13.2□□□□□ -0.3
PAX6-242ENST00000638878 NBPF6Q5VWK0 638 aa13.2□□□□□ -0.3
PAX6-242ENST00000638878 NBPF4Q96M43 638 aa13.2□□□□□ -0.3
PAX6-242ENST00000638878 PARP4Q9UKK3 1724 aaKnown RBP13.19□□□□□ -0.3
PAX6-242ENST00000638878 MAP2P11137 1827 aaKnown RBP13.19□□□□□ -0.3
PAX6-242ENST00000638878 A0A0G2JS52 829 aa13.19□□□□□ -0.3
PAX6-242ENST00000638878 NCAPD2Q15021 1401 aa13.18□□□□□ -0.3
PAX6-242ENST00000638878 BRWD3Q6RI45 1802 aa13.18□□□□□ -0.3
PAX6-242ENST00000638878 EP400Q96L91 3159 aa13.17□□□□□ -0.3
PAX6-242ENST00000638878 PEAK1Q9H792 1746 aa13.17□□□□□ -0.3
PAX6-242ENST00000638878 PPM1GO15355 546 aaPredicted RBP13.17□□□□□ -0.3
PAX6-242ENST00000638878 TNNT2P45379 298 aaPredicted RBP13.17□□□□□ -0.3
PAX6-242ENST00000638878 PPP4R2Q9NY27 417 aa13.17□□□□□ -0.3
PAX6-242ENST00000638878 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.17□□□□□ -0.3
PAX6-242ENST00000638878 HNRNPUQ00839 825 aaKnown RBP eCLIP13.16□□□□□ -0.3
PAX6-242ENST00000638878 CC2D1BQ5T0F9 858 aaKnown RBP13.16□□□□□ -0.3
PAX6-242ENST00000638878 LTV1Q96GA3 475 aaPredicted RBP13.16□□□□□ -0.3
PAX6-242ENST00000638878 MTHFSP49914 203 aa13.15□□□□□ -0.3
PAX6-242ENST00000638878 EIF4A2Q14240 407 aaKnown RBP13.15□□□□□ -0.3
PAX6-242ENST00000638878 MARCH10Q8NA82 808 aaPredicted RBP13.15□□□□□ -0.3
PAX6-242ENST00000638878 EYA1Q99502 592 aa13.15□□□□□ -0.3
PAX6-242ENST00000638878 RAPGEF4Q8WZA2 1011 aa13.14□□□□□ -0.31
PAX6-242ENST00000638878 IGSF1Q8N6C5 1336 aa13.13□□□□□ -0.31
PAX6-242ENST00000638878 OVOS2A0A0G2JMS6 1433 aa13.13□□□□□ -0.31
PAX6-242ENST00000638878 TNS2Q63HR2 1409 aa13.13□□□□□ -0.31
PAX6-242ENST00000638878 IL13P35225 146 aa13.13□□□□□ -0.31
PAX6-242ENST00000638878 ZCRB1Q8TBF4 217 aaKnown RBP13.13□□□□□ -0.31
PAX6-242ENST00000638878 LRRC37A3O60309 1634 aa13.13□□□□□ -0.31
PAX6-242ENST00000638878 WNK3Q9BYP7 1800 aa13.12□□□□□ -0.31
PAX6-242ENST00000638878 TATP17735 454 aaPredicted RBP13.12□□□□□ -0.31
PAX6-242ENST00000638878 SF3B2Q13435 895 aaKnown RBP13.12□□□□□ -0.31
PAX6-242ENST00000638878 BCL11BQ9C0K0 894 aaPredicted RBP13.11□□□□□ -0.31
PAX6-242ENST00000638878 KDRP35968 1356 aa13.1□□□□□ -0.31
PAX6-242ENST00000638878 PLSCR1O15162 318 aa13.1□□□□□ -0.31
PAX6-242ENST00000638878 RALBP1Q15311 655 aa13.1□□□□□ -0.31
PAX6-242ENST00000638878 FAM182BQ5T319 152 aa13.1□□□□□ -0.31
PAX6-242ENST00000638878 ZBED9Q6R2W3 1325 aa13.1□□□□□ -0.31
PAX6-242ENST00000638878 PARD3Q8TEW0 1356 aa13.1□□□□□ -0.31
PAX6-242ENST00000638878 DIAPH1O60610 1272 aaKnown RBP13.09□□□□□ -0.31
PAX6-242ENST00000638878 PPP2R1AP30153 589 aa13.09□□□□□ -0.31
PAX6-242ENST00000638878 NKX1-1Q15270 411 aaPredicted RBP13.09□□□□□ -0.31
PAX6-242ENST00000638878 SPG7Q9UQ90 795 aa13.09□□□□□ -0.31
PAX6-242ENST00000638878 BAG6P46379 1132 aa13.08□□□□□ -0.31
PAX6-242ENST00000638878 AMOTQ4VCS5 1084 aa13.08□□□□□ -0.31
PAX6-242ENST00000638878 CFAP53Q96M91 514 aa13.08□□□□□ -0.31
PAX6-242ENST00000638878 MEGF6O75095 1541 aa13.08□□□□□ -0.32
PAX6-242ENST00000638878 RGPD2P0DJD1 1756 aa13.07□□□□□ -0.32
PAX6-242ENST00000638878 TRIM37O94972 964 aa13.07□□□□□ -0.32
PAX6-242ENST00000638878 MAPK8IP2Q13387 824 aaPredicted RBP13.07□□□□□ -0.32
PAX6-242ENST00000638878 ERICH6Q7L0X2 663 aa13.07□□□□□ -0.32
PAX6-242ENST00000638878 USHBP1Q8N6Y0 703 aa13.07□□□□□ -0.32
PAX6-242ENST00000638878 BCL11AQ9H165 835 aa13.07□□□□□ -0.32
PAX6-242ENST00000638878 PRKRIP1Q9H875 184 aaPredicted RBP13.07□□□□□ -0.32
PAX6-242ENST00000638878 PCDH11XQ9BZA7 1347 aa13.07□□□□□ -0.32
PAX6-242ENST00000638878 PCDH11YQ9BZA8 1340 aa13.07□□□□□ -0.32
PAX6-242ENST00000638878 DDX54Q8TDD1 881 aaKnown RBP13.07□□□□□ -0.32
PAX6-242ENST00000638878 RGPD1P0DJD0 1748 aa13.06□□□□□ -0.32
PAX6-242ENST00000638878 APBA3O96018 575 aa13.06□□□□□ -0.32
PAX6-242ENST00000638878 CAMKK2Q96RR4 588 aa13.06□□□□□ -0.32
PAX6-242ENST00000638878 CYP27B1O15528 508 aa13.05□□□□□ -0.32
PAX6-242ENST00000638878 PLEKHO1Q53GL0 409 aaPredicted RBP13.05□□□□□ -0.32
PAX6-242ENST00000638878 SULT6B1Q6IMI4 303 aa13.05□□□□□ -0.32
PAX6-242ENST00000638878 FBXO3Q9UK99 471 aa13.05□□□□□ -0.32
PAX6-242ENST00000638878 NUDCQ9Y266 331 aa13.05□□□□□ -0.32
PAX6-242ENST00000638878 COL3A1P02461 1466 aaPredicted RBP13.04□□□□□ -0.32
PAX6-242ENST00000638878 MSH5O43196 834 aa13.04□□□□□ -0.32
PAX6-242ENST00000638878 HMGB2P26583 209 aaKnown RBP13.04□□□□□ -0.32
PAX6-242ENST00000638878 IFNL2Q8IZJ0 200 aa13.04□□□□□ -0.32
PAX6-242ENST00000638878 HSP90AB1P08238 724 aaKnown RBP13.03□□□□□ -0.32
PAX6-242ENST00000638878 SBF2Q86WG5 1849 aa13.03□□□□□ -0.32
PAX6-242ENST00000638878 PKD1L3Q7Z443 1732 aa13.02□□□□□ -0.32
PAX6-242ENST00000638878 FCHSD2O94868 740 aa13.02□□□□□ -0.33
PAX6-242ENST00000638878 PHKG2P15735 406 aa13.02□□□□□ -0.33
PAX6-242ENST00000638878 DEFB132Q7Z7B7 95 aa13.02□□□□□ -0.33
PAX6-242ENST00000638878 TNS1Q9HBL0 1735 aaKnown RBP13.02□□□□□ -0.33
PAX6-242ENST00000638878 KCNQ2O43526 872 aa13.01□□□□□ -0.33
PAX6-242ENST00000638878 EN1Q05925 392 aaPredicted RBP13.01□□□□□ -0.33
PAX6-242ENST00000638878 DCAF5Q96JK2 942 aa13.01□□□□□ -0.33
PAX6-242ENST00000638878 SHANK3Q9BYB0 1731 aa13.01□□□□□ -0.33
PAX6-242ENST00000638878 RGPD3A6NKT7 1758 aaPredicted RBP13□□□□□ -0.33
PAX6-242ENST00000638878 RGPD4Q7Z3J3 1758 aa13□□□□□ -0.33
PAX6-242ENST00000638878 MYBBP1AQ9BQG0 1328 aaKnown RBP13□□□□□ -0.33
PAX6-242ENST00000638878 ERVV-2B6SEH9 535 aa13□□□□□ -0.33
PAX6-242ENST00000638878 PRIM1P49642 420 aaKnown RBP13□□□□□ -0.33
PAX6-242ENST00000638878 AEBP1Q8IUX7 1158 aa13□□□□□ -0.33
PAX6-242ENST00000638878 HOMEZQ8IX15 550 aa13□□□□□ -0.33
PAX6-242ENST00000638878 MRS2Q9HD23 443 aa13□□□□□ -0.33
PAX6-242ENST00000638878 CNGB1Q14028 1251 aaPredicted RBP12.99□□□□□ -0.33
PAX6-242ENST00000638878 EZH2Q15910 746 aaKnown RBP12.99□□□□□ -0.33
PAX6-242ENST00000638878 PTF1AQ7RTS3 328 aa12.99□□□□□ -0.33
PAX6-242ENST00000638878 PNNQ9H307 717 aaKnown RBP12.99□□□□□ -0.33
PAX6-242ENST00000638878 NHSQ6T4R5 1651 aa12.99□□□□□ -0.33
PAX6-242ENST00000638878 AKAP4Q5JQC9 854 aa12.98□□□□□ -0.33
PAX6-242ENST00000638878 PROM2Q8N271 834 aa12.98□□□□□ -0.33
PAX6-242ENST00000638878 ACSBG1Q96GR2 724 aa12.98□□□□□ -0.33
PAX6-242ENST00000638878 RNF123Q5XPI4 1314 aa12.97□□□□□ -0.33
PAX6-242ENST00000638878 U2SURPO15042 1029 aaKnown RBP12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms