RNA–Protein interactions for RNA: ENST00000638154.2

TCF4-290, Transcript of transcription factor 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene TCF4, Length 7,801 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-290ENST00000638154 SAFB2Q14151 953 aaKnown RBP eCLIP6.37□□□□□ -1.39
TCF4-290ENST00000638154 CCDC40Q4G0X9 1142 aa6.37□□□□□ -1.39
TCF4-290ENST00000638154 ITPRIPQ8IWB1 547 aa6.37□□□□□ -1.39
TCF4-290ENST00000638154 ATRIPQ8WXE1 791 aa6.37□□□□□ -1.39
TCF4-290ENST00000638154 TRIM63Q969Q1 353 aa6.37□□□□□ -1.39
TCF4-290ENST00000638154 RFC1P35251 1148 aaPredicted RBP6.37□□□□□ -1.39
TCF4-290ENST00000638154 IRX1P78414 480 aaPredicted RBP6.37□□□□□ -1.39
TCF4-290ENST00000638154 ANKRD13AQ8IZ07 590 aa6.37□□□□□ -1.39
TCF4-290ENST00000638154 CTAGE5O15320 804 aa6.37□□□□□ -1.39
TCF4-290ENST00000638154 HSPA4P34932 840 aa6.37□□□□□ -1.39
TCF4-290ENST00000638154 TRDNQ13061 729 aa6.37□□□□□ -1.39
TCF4-290ENST00000638154 FILIP1LQ4L180 1135 aa6.37□□□□□ -1.39
TCF4-290ENST00000638154 GKAP1Q5VSY0 366 aaPredicted RBP6.37□□□□□ -1.39
TCF4-290ENST00000638154 CC2D1AQ6P1N0 951 aaPredicted RBP6.37□□□□□ -1.39
TCF4-290ENST00000638154 SPATS2Q86XZ4 545 aaKnown RBP6.37□□□□□ -1.39
TCF4-290ENST00000638154 RNF216Q9NWF9 866 aaPredicted RBP6.37□□□□□ -1.39
TCF4-290ENST00000638154 STK3Q13188 491 aa6.37□□□□□ -1.39
TCF4-290ENST00000638154 FLCNQ8NFG4 579 aa6.37□□□□□ -1.39
TCF4-290ENST00000638154 KIF18AQ8NI77 898 aa6.37□□□□□ -1.39
TCF4-290ENST00000638154 CEP63Q96MT8 703 aa6.37□□□□□ -1.39
TCF4-290ENST00000638154 YY1AP1Q9H869 796 aa6.37□□□□□ -1.39
TCF4-290ENST00000638154 SMC1AQ14683 1233 aaKnown RBP6.36□□□□□ -1.39
TCF4-290ENST00000638154 MICAL1Q8TDZ2 1067 aa6.36□□□□□ -1.39
TCF4-290ENST00000638154 MSL3Q8N5Y2 521 aaKnown RBP6.36□□□□□ -1.39
TCF4-290ENST00000638154 CACTINQ8WUQ7 758 aaKnown RBP6.36□□□□□ -1.39
TCF4-290ENST00000638154 FMNL2Q96PY5 1086 aa6.36□□□□□ -1.39
TCF4-290ENST00000638154 KCNG1Q9UIX4 513 aa6.36□□□□□ -1.39
TCF4-290ENST00000638154 RABGAP1Q9Y3P9 1069 aa6.36□□□□□ -1.39
TCF4-290ENST00000638154 CAPN2P17655 700 aa6.36□□□□□ -1.39
TCF4-290ENST00000638154 MYLK4Q86YV6 388 aaPredicted RBP6.36□□□□□ -1.39
TCF4-290ENST00000638154 UBXN4Q92575 508 aa6.36□□□□□ -1.39
TCF4-290ENST00000638154 METTL14Q9HCE5 456 aaKnown RBP6.36□□□□□ -1.39
TCF4-290ENST00000638154 HIP1RO75146 1068 aa6.36□□□□□ -1.39
TCF4-290ENST00000638154 PRPF40AO75400 957 aaKnown RBP6.36□□□□□ -1.39
TCF4-290ENST00000638154 ATICP31939 592 aa6.36□□□□□ -1.39
TCF4-290ENST00000638154 GJC2Q5T442 439 aaPredicted RBP6.36□□□□□ -1.39
TCF4-290ENST00000638154 NAT10Q9H0A0 1025 aaKnown RBP6.36□□□□□ -1.39
TCF4-290ENST00000638154 MS4A1P11836 297 aa6.36□□□□□ -1.39
TCF4-290ENST00000638154 PDCD2Q16342 344 aaPredicted RBP6.36□□□□□ -1.39
TCF4-290ENST00000638154 SDCCAG8Q86SQ7 713 aaPredicted RBP6.36□□□□□ -1.39
TCF4-290ENST00000638154 ABTB1Q969K4 478 aaPredicted RBP6.36□□□□□ -1.39
TCF4-290ENST00000638154 TRIM17Q9Y577 477 aa6.36□□□□□ -1.39
TCF4-290ENST00000638154 U2AF2P26368 475 aaKnown RBP eCLIP6.35□□□□□ -1.39
TCF4-290ENST00000638154 DMPKQ09013 629 aa6.35□□□□□ -1.39
TCF4-290ENST00000638154 ODF2Q5BJF6 829 aa6.35□□□□□ -1.39
TCF4-290ENST00000638154 CXorf56Q9H5V9 222 aa6.35□□□□□ -1.39
TCF4-290ENST00000638154 HDAC9Q9UKV0 1011 aa6.35□□□□□ -1.39
TCF4-290ENST00000638154 TMF1P82094 1093 aa6.35□□□□□ -1.39
TCF4-290ENST00000638154 DNAJC21Q5F1R6 531 aaKnown RBP6.35□□□□□ -1.39
TCF4-290ENST00000638154 PALMDQ9NP74 551 aa6.35□□□□□ -1.39
TCF4-290ENST00000638154 PAX3P23760 479 aa6.35□□□□□ -1.39
TCF4-290ENST00000638154 VPS41P49754 854 aa6.35□□□□□ -1.39
TCF4-290ENST00000638154 N4BP2L2Q92802 583 aaPredicted RBP6.35□□□□□ -1.39
TCF4-290ENST00000638154 U2AF1L5P0DN76 240 aaPredicted RBP6.35□□□□□ -1.39
TCF4-290ENST00000638154 ABL2P42684 1182 aa6.35□□□□□ -1.39
TCF4-290ENST00000638154 U2AF1Q01081 240 aaKnown RBP eCLIP6.35□□□□□ -1.39
TCF4-290ENST00000638154 SF3B2Q13435 895 aaKnown RBP6.35□□□□□ -1.39
TCF4-290ENST00000638154 MSL1Q68DK7 614 aa6.35□□□□□ -1.39
TCF4-290ENST00000638154 CEP57L1Q8IYX8 460 aa6.35□□□□□ -1.39
TCF4-290ENST00000638154 PMFBP1Q8TBY8 1022 aa6.35□□□□□ -1.39
TCF4-290ENST00000638154 NAP1L3Q99457 506 aaPredicted RBP6.35□□□□□ -1.39
TCF4-290ENST00000638154 SKOR1P84550 965 aa6.35□□□□□ -1.39
TCF4-290ENST00000638154 CCDC47Q96A33 483 aaKnown RBP6.35□□□□□ -1.39
TCF4-290ENST00000638154 MRGBPQ9NV56 204 aa6.35□□□□□ -1.39
TCF4-290ENST00000638154 SMIM24O75264 130 aa6.35□□□□□ -1.39
TCF4-290ENST00000638154 ERCC3P19447 782 aa6.35□□□□□ -1.39
TCF4-290ENST00000638154 BASP1P80723 227 aaKnown RBP6.35□□□□□ -1.39
TCF4-290ENST00000638154 NUTM1Q86Y26 1132 aa6.35□□□□□ -1.39
TCF4-290ENST00000638154 TRIM6Q9C030 488 aaPredicted RBP6.35□□□□□ -1.39
TCF4-290ENST00000638154 MAFGO15525 162 aa6.34□□□□□ -1.39
TCF4-290ENST00000638154 BUB1BO60566 1050 aaPredicted RBP6.34□□□□□ -1.39
TCF4-290ENST00000638154 XBP1P17861 261 aa6.34□□□□□ -1.39
TCF4-290ENST00000638154 ZFYVE27Q5T4F4 411 aa6.34□□□□□ -1.39
TCF4-290ENST00000638154 CCDC121Q6ZUS5 278 aa6.34□□□□□ -1.39
TCF4-290ENST00000638154 TSPYL2Q9H2G4 693 aaPredicted RBP6.34□□□□□ -1.39
TCF4-290ENST00000638154 MXRA7P84157 204 aa6.34□□□□□ -1.39
TCF4-290ENST00000638154 NMIQ13287 307 aaPredicted RBP6.34□□□□□ -1.39
TCF4-290ENST00000638154 MYSM1Q5VVJ2 828 aa6.34□□□□□ -1.39
TCF4-290ENST00000638154 PIAS4Q8N2W9 510 aaPredicted RBP6.34□□□□□ -1.39
TCF4-290ENST00000638154 ATL2Q8NHH9 583 aa6.34□□□□□ -1.39
TCF4-290ENST00000638154 EEA1Q15075 1411 aa6.34□□□□□ -1.39
TCF4-290ENST00000638154 PPP1R12AO14974 1030 aaPredicted RBP6.34□□□□□ -1.39
TCF4-290ENST00000638154 MAP9Q49MG5 647 aa6.34□□□□□ -1.39
TCF4-290ENST00000638154 IQCA1Q86XH1 822 aa6.34□□□□□ -1.39
TCF4-290ENST00000638154 EXOC6Q8TAG9 804 aa6.34□□□□□ -1.39
TCF4-290ENST00000638154 RABEP2Q9H5N1 569 aa6.34□□□□□ -1.39
TCF4-290ENST00000638154 PFDN4Q9NQP4 134 aa6.34□□□□□ -1.39
TCF4-290ENST00000638154 FAM177BA6PVY3 158 aa6.34□□□□□ -1.4
TCF4-290ENST00000638154 SSBP05455 408 aaKnown RBP eCLIP6.34□□□□□ -1.4
TCF4-290ENST00000638154 LMNB1P20700 586 aa6.34□□□□□ -1.4
TCF4-290ENST00000638154 USP5P45974 858 aa6.34□□□□□ -1.4
TCF4-290ENST00000638154 AKAP17AQ02040 695 aaKnown RBP6.34□□□□□ -1.4
TCF4-290ENST00000638154 UBE4AQ14139 1066 aa6.34□□□□□ -1.4
TCF4-290ENST00000638154 EXOC1Q9NV70 894 aa6.34□□□□□ -1.4
TCF4-290ENST00000638154 PAIP2BQ9ULR5 123 aaKnown RBP6.34□□□□□ -1.4
TCF4-290ENST00000638154 RABL2BQ9UNT1 228 aa6.34□□□□□ -1.4
TCF4-290ENST00000638154 SPAG9O60271 1321 aaKnown RBP6.34□□□□□ -1.4
TCF4-290ENST00000638154 TSR1Q2NL82 804 aaKnown RBP6.34□□□□□ -1.4
TCF4-290ENST00000638154 FILIP1Q7Z7B0 1213 aa6.34□□□□□ -1.4
TCF4-290ENST00000638154 ARMC2Q8NEN0 867 aa6.34□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms