RNA–Protein interactions for RNA: ENST00000638011.1

UBE3A-227, Transcript of ubiquitin protein ligase E3A, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBE3A, Length 8,742 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-227ENST00000638011 NAP1L3Q99457 506 aaPredicted RBP17.6■□□□□ 0.41
UBE3A-227ENST00000638011 KIF20AO95235 890 aa17.6■□□□□ 0.41
UBE3A-227ENST00000638011 FERP16591 822 aa17.6■□□□□ 0.41
UBE3A-227ENST00000638011 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.6■□□□□ 0.41
UBE3A-227ENST00000638011 WASHC2CQ9Y4E1 1318 aa17.6■□□□□ 0.41
UBE3A-227ENST00000638011 EIF5P55010 431 aaKnown RBP17.6■□□□□ 0.41
UBE3A-227ENST00000638011 FAM184BQ9ULE4 1060 aa17.6■□□□□ 0.41
UBE3A-227ENST00000638011 GSTTP1A0A1W2PQM5 241 aa17.59■□□□□ 0.41
UBE3A-227ENST00000638011 STK26Q9P289 416 aa17.59■□□□□ 0.41
UBE3A-227ENST00000638011 CARMIL1Q5VZK9 1371 aa17.59■□□□□ 0.41
UBE3A-227ENST00000638011 MIPOL1Q8TD10 442 aa17.59■□□□□ 0.41
UBE3A-227ENST00000638011 FKBP5Q13451 457 aaPredicted RBP17.59■□□□□ 0.41
UBE3A-227ENST00000638011 PLVAPQ9BX97 442 aa17.59■□□□□ 0.41
UBE3A-227ENST00000638011 CCDC27Q2M243 656 aa17.59■□□□□ 0.41
UBE3A-227ENST00000638011 SPECC1Q5M775 1068 aa17.59■□□□□ 0.41
UBE3A-227ENST00000638011 UBTFL1P0CB47 393 aaPredicted RBP17.58■□□□□ 0.41
UBE3A-227ENST00000638011 CKAP4Q07065 602 aaKnown RBP17.58■□□□□ 0.41
UBE3A-227ENST00000638011 CCDC57Q2TAC2 916 aa17.58■□□□□ 0.41
UBE3A-227ENST00000638011 RNF168Q8IYW5 571 aaPredicted RBP17.58■□□□□ 0.41
UBE3A-227ENST00000638011 L3MBTL2Q969R5 705 aa17.58■□□□□ 0.41
UBE3A-227ENST00000638011 BCL2L13Q9BXK5 485 aa17.58■□□□□ 0.41
UBE3A-227ENST00000638011 ZWINTO95229 277 aa17.58■□□□□ 0.41
UBE3A-227ENST00000638011 KIF5BP33176 963 aa17.58■□□□□ 0.41
UBE3A-227ENST00000638011 MAPK8IP2Q13387 824 aaPredicted RBP17.58■□□□□ 0.4
UBE3A-227ENST00000638011 FKBP15Q5T1M5 1219 aa17.58■□□□□ 0.4
UBE3A-227ENST00000638011 LMAN1P49257 510 aa17.58■□□□□ 0.4
UBE3A-227ENST00000638011 AIMP1Q12904 312 aaKnown RBP17.58■□□□□ 0.4
UBE3A-227ENST00000638011 GTF2F1P35269 517 aaKnown RBP eCLIP17.57■□□□□ 0.46e-11■■■■■ 42.3
UBE3A-227ENST00000638011 PANK3Q9H999 370 aa17.57■□□□□ 0.4
UBE3A-227ENST00000638011 LARP1BQ659C4 914 aaKnown RBP17.57■□□□□ 0.4
UBE3A-227ENST00000638011 FBF1Q8TES7 1133 aa17.57■□□□□ 0.4
UBE3A-227ENST00000638011 IFI16Q16666 785 aaKnown RBP17.57■□□□□ 0.4
UBE3A-227ENST00000638011 HS1BP3Q53T59 392 aa17.57■□□□□ 0.4
UBE3A-227ENST00000638011 GBP6Q6ZN66 633 aa17.57■□□□□ 0.4
UBE3A-227ENST00000638011 PYM1Q9BRP8 204 aaKnown RBP17.56■□□□□ 0.4
UBE3A-227ENST00000638011 TANGO6Q9C0B7 1094 aa17.56■□□□□ 0.4
UBE3A-227ENST00000638011 CCDC150Q8NCX0 1101 aa17.56■□□□□ 0.4
UBE3A-227ENST00000638011 PHAXQ9H814 394 aaKnown RBP17.56■□□□□ 0.4
UBE3A-227ENST00000638011 EBAG9O00559 213 aa17.56■□□□□ 0.4
UBE3A-227ENST00000638011 NGDNQ8NEJ9 315 aaKnown RBP17.56■□□□□ 0.4
UBE3A-227ENST00000638011 STIM2Q9P246 746 aa17.56■□□□□ 0.4
UBE3A-227ENST00000638011 DHX29Q7Z478 1369 aaKnown RBP17.56■□□□□ 0.4
UBE3A-227ENST00000638011 BCL11BQ9C0K0 894 aaPredicted RBP17.56■□□□□ 0.4
UBE3A-227ENST00000638011 FERMT1Q9BQL6 677 aa17.56■□□□□ 0.4
UBE3A-227ENST00000638011 CCDC113Q9H0I3 377 aa17.56■□□□□ 0.4
UBE3A-227ENST00000638011 EID1Q9Y6B2 187 aa17.56■□□□□ 0.4
UBE3A-227ENST00000638011 KIF4BQ2VIQ3 1234 aa17.56■□□□□ 0.4
UBE3A-227ENST00000638011 HSF2BPO75031 334 aa17.55■□□□□ 0.4
UBE3A-227ENST00000638011 MYH10P35580 1976 aa17.55■□□□□ 0.4
UBE3A-227ENST00000638011 CCDC158Q5M9N0 1113 aa17.55■□□□□ 0.4
UBE3A-227ENST00000638011 CCDC110Q8TBZ0 833 aa17.55■□□□□ 0.4
UBE3A-227ENST00000638011 RAD21O60216 631 aa17.55■□□□□ 0.4
UBE3A-227ENST00000638011 FSD1Q9BTV5 496 aa17.55■□□□□ 0.4
UBE3A-227ENST00000638011 TOP1P11387 765 aaKnown RBP17.54■□□□□ 0.4
UBE3A-227ENST00000638011 OPA1O60313 960 aa17.54■□□□□ 0.4
UBE3A-227ENST00000638011 TCHPQ9BT92 498 aa17.54■□□□□ 0.4
UBE3A-227ENST00000638011 TACC1O75410 805 aa17.54■□□□□ 0.4
UBE3A-227ENST00000638011 TNNT1P13805 278 aa17.54■□□□□ 0.4
UBE3A-227ENST00000638011 B4GALNT4Q76KP1 1039 aa17.54■□□□□ 0.4
UBE3A-227ENST00000638011 NACAP1Q9BZK3 213 aa17.54■□□□□ 0.4
UBE3A-227ENST00000638011 CCDC155Q8N6L0 562 aa17.54■□□□□ 0.4
UBE3A-227ENST00000638011 RASSF4Q9H2L5 321 aa17.54■□□□□ 0.4
UBE3A-227ENST00000638011 GOLIM4O00461 696 aa17.53■□□□□ 0.4
UBE3A-227ENST00000638011 ZNF428Q96B54 188 aa17.53■□□□□ 0.4
UBE3A-227ENST00000638011 CUX2O14529 1486 aa17.53■□□□□ 0.4
UBE3A-227ENST00000638011 ZBTB17Q13105 803 aa17.53■□□□□ 0.4
UBE3A-227ENST00000638011 IKBKGQ9Y6K9 419 aa17.53■□□□□ 0.4
UBE3A-227ENST00000638011 UVSSAQ2YD98 709 aa17.53■□□□□ 0.4
UBE3A-227ENST00000638011 DIAPH1O60610 1272 aaKnown RBP17.52■□□□□ 0.4
UBE3A-227ENST00000638011 WASHC4Q2M389 1173 aa17.52■□□□□ 0.4
UBE3A-227ENST00000638011 ZSCAN25Q6NSZ9 544 aa17.52■□□□□ 0.4
UBE3A-227ENST00000638011 TMEM132AQ24JP5 1023 aa17.52■□□□□ 0.4
UBE3A-227ENST00000638011 CLIP2Q9UDT6 1046 aa17.52■□□□□ 0.4
UBE3A-227ENST00000638011 RIPK4P57078 832 aa17.52■□□□□ 0.39
UBE3A-227ENST00000638011 LUC7L2Q9Y383 392 aaKnown RBP17.52■□□□□ 0.39
UBE3A-227ENST00000638011 RRP7AQ9Y3A4 280 aaKnown RBP17.52■□□□□ 0.39
UBE3A-227ENST00000638011 SMARCA2P51531 1590 aa17.52■□□□□ 0.39
UBE3A-227ENST00000638011 SYCE3A1L190 88 aa17.51■□□□□ 0.39
UBE3A-227ENST00000638011 CTNNA3Q9UI47 895 aa17.51■□□□□ 0.39
UBE3A-227ENST00000638011 ZHX1Q9UKY1 873 aaPredicted RBP17.51■□□□□ 0.39
UBE3A-227ENST00000638011 PIP4K2BP78356 416 aa17.51■□□□□ 0.39
UBE3A-227ENST00000638011 CCDC94Q9BW85 323 aaPredicted RBP17.51■□□□□ 0.39
UBE3A-227ENST00000638011 MKRN1Q9UHC7 482 aaKnown RBP17.51■□□□□ 0.39
UBE3A-227ENST00000638011 YEATS4O95619 227 aa17.51■□□□□ 0.39
UBE3A-227ENST00000638011 CLCN1P35523 988 aa17.51■□□□□ 0.39
UBE3A-227ENST00000638011 SMC6Q96SB8 1091 aa17.51■□□□□ 0.39
UBE3A-227ENST00000638011 NEBLO76041 1014 aa17.51■□□□□ 0.39
UBE3A-227ENST00000638011 ST20-MTHFSA0A0A6YYL1 179 aa17.5■□□□□ 0.39
UBE3A-227ENST00000638011 KIF4AO95239 1232 aa17.5■□□□□ 0.39
UBE3A-227ENST00000638011 SNW1Q13573 536 aaKnown RBP17.5■□□□□ 0.39
UBE3A-227ENST00000638011 IFT74Q96LB3 600 aa17.5■□□□□ 0.39
UBE3A-227ENST00000638011 SH2B1Q9NRF2 756 aaPredicted RBP17.5■□□□□ 0.39
UBE3A-227ENST00000638011 PRDM10Q9NQV6 1147 aa17.5■□□□□ 0.39
UBE3A-227ENST00000638011 URI1O94763 535 aaPredicted RBP17.49■□□□□ 0.39
UBE3A-227ENST00000638011 UBE4AQ14139 1066 aa17.49■□□□□ 0.39
UBE3A-227ENST00000638011 CCDC121Q6ZUS5 278 aa17.49■□□□□ 0.39
UBE3A-227ENST00000638011 SMG6Q86US8 1419 aaKnown RBP17.49■□□□□ 0.39
UBE3A-227ENST00000638011 TSNARE1Q96NA8 513 aa17.49■□□□□ 0.39
UBE3A-227ENST00000638011 SUDS3Q9H7L9 328 aaPredicted RBP17.49■□□□□ 0.39
UBE3A-227ENST00000638011 FAM114A2Q9NRY5 505 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms