RNA–Protein interactions for RNA: ENST00000637844.1

CACNA1D-227, Transcript of calcium voltage-gated channel subunit alpha1 D, humanhuman

TSL 3

Gene CACNA1D, Length 548 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1D-227ENST00000637844 ZC3H6P61129 1189 aaKnown RBP8.06□□□□□ -1.12
CACNA1D-227ENST00000637844 TWISTNBQ3B726 338 aaPredicted RBP8.06□□□□□ -1.12
CACNA1D-227ENST00000637844 C20orf194Q5TEA3 1177 aa8.06□□□□□ -1.12
CACNA1D-227ENST00000637844 THUMPD2Q9BTF0 503 aaKnown RBP8.06□□□□□ -1.12
CACNA1D-227ENST00000637844 CHMP4BQ9H444 224 aaKnown RBP8.06□□□□□ -1.12
CACNA1D-227ENST00000637844 MBIPQ9NS73 344 aa8.06□□□□□ -1.12
CACNA1D-227ENST00000637844 ABCA3Q99758 1704 aa8.06□□□□□ -1.12
CACNA1D-227ENST00000637844 SOS2Q07890 1332 aaPredicted RBP8.05□□□□□ -1.12
CACNA1D-227ENST00000637844 NCAPD2Q15021 1401 aa8.05□□□□□ -1.12
CACNA1D-227ENST00000637844 DCTN1Q14203 1278 aa8.05□□□□□ -1.12
CACNA1D-227ENST00000637844 C1orf141Q5JVX7 400 aa8.05□□□□□ -1.12
CACNA1D-227ENST00000637844 NBPF6Q5VWK0 638 aa8.05□□□□□ -1.12
CACNA1D-227ENST00000637844 MCM10Q7L590 875 aa8.05□□□□□ -1.12
CACNA1D-227ENST00000637844 DZIP1LQ8IYY4 767 aaKnown RBP8.05□□□□□ -1.12
CACNA1D-227ENST00000637844 USHBP1Q8N6Y0 703 aa8.05□□□□□ -1.12
CACNA1D-227ENST00000637844 DDX17Q92841 729 aaKnown RBP8.05□□□□□ -1.12
CACNA1D-227ENST00000637844 NBPF4Q96M43 638 aa8.05□□□□□ -1.12
CACNA1D-227ENST00000637844 BCL2L13Q9BXK5 485 aa8.05□□□□□ -1.12
CACNA1D-227ENST00000637844 CHMP4AQ9BY43 222 aa8.05□□□□□ -1.12
CACNA1D-227ENST00000637844 BABAM1Q9NWV8 329 aa8.05□□□□□ -1.12
CACNA1D-227ENST00000637844 TSPYL4Q9UJ04 414 aa8.05□□□□□ -1.12
CACNA1D-227ENST00000637844 CPDO75976 1380 aa8.05□□□□□ -1.12
CACNA1D-227ENST00000637844 KIAA0232Q92628 1395 aa8.05□□□□□ -1.12
CACNA1D-227ENST00000637844 PLEKHG2Q9H7P9 1386 aa8.05□□□□□ -1.12
CACNA1D-227ENST00000637844 COL18A1P39060 1754 aa8.05□□□□□ -1.12
CACNA1D-227ENST00000637844 CRB1P82279 1406 aa8.04□□□□□ -1.12
CACNA1D-227ENST00000637844 CHL1O00533 1208 aa8.04□□□□□ -1.12
CACNA1D-227ENST00000637844 ATF7IPQ6VMQ6 1270 aa8.04□□□□□ -1.12
CACNA1D-227ENST00000637844 CENPQQ7L2Z9 268 aaPredicted RBP8.04□□□□□ -1.12
CACNA1D-227ENST00000637844 SSH1Q8WYL5 1049 aa8.04□□□□□ -1.12
CACNA1D-227ENST00000637844 RAPGEF4Q8WZA2 1011 aa8.04□□□□□ -1.12
CACNA1D-227ENST00000637844 ROBO1Q9Y6N7 1651 aa8.04□□□□□ -1.12
CACNA1D-227ENST00000637844 ERBB3P21860 1342 aa8.03□□□□□ -1.12
CACNA1D-227ENST00000637844 SOS1Q07889 1333 aaPredicted RBP8.03□□□□□ -1.12
CACNA1D-227ENST00000637844 PARP4Q9UKK3 1724 aaKnown RBP8.03□□□□□ -1.12
CACNA1D-227ENST00000637844 VAMP4O75379 141 aa8.03□□□□□ -1.12
CACNA1D-227ENST00000637844 TATP17735 454 aaPredicted RBP8.03□□□□□ -1.12
CACNA1D-227ENST00000637844 BRPF1P55201 1214 aaPredicted RBP8.03□□□□□ -1.12
CACNA1D-227ENST00000637844 TEFQ10587 303 aa8.03□□□□□ -1.12
CACNA1D-227ENST00000637844 AKAP4Q5JQC9 854 aa8.03□□□□□ -1.12
CACNA1D-227ENST00000637844 ZNF530Q6P9A1 599 aaPredicted RBP8.03□□□□□ -1.12
CACNA1D-227ENST00000637844 PANK1Q8TE04 598 aa8.03□□□□□ -1.12
CACNA1D-227ENST00000637844 ARHGAP45Q92619 1136 aa8.03□□□□□ -1.12
CACNA1D-227ENST00000637844 LRRC59Q96AG4 307 aaKnown RBP8.03□□□□□ -1.12
CACNA1D-227ENST00000637844 CLUAP1Q96AJ1 413 aa8.03□□□□□ -1.12
CACNA1D-227ENST00000637844 PRDM11Q9NQV5 511 aa8.03□□□□□ -1.12
CACNA1D-227ENST00000637844 NLRP2Q9NX02 1062 aa8.03□□□□□ -1.12
CACNA1D-227ENST00000637844 NOB1Q9ULX3 412 aaKnown RBP8.03□□□□□ -1.12
CACNA1D-227ENST00000637844 COG6Q9Y2V7 657 aa8.03□□□□□ -1.12
CACNA1D-227ENST00000637844 VIRMAQ69YN4 1812 aaKnown RBP8.03□□□□□ -1.12
CACNA1D-227ENST00000637844 AHDC1Q5TGY3 1603 aaPredicted RBP8.03□□□□□ -1.12
CACNA1D-227ENST00000637844 OVOS2A0A0G2JMS6 1433 aa8.03□□□□□ -1.12
CACNA1D-227ENST00000637844 MVPQ14764 893 aaKnown RBP8.02□□□□□ -1.13
CACNA1D-227ENST00000637844 TAF7Q15545 349 aaPredicted RBP8.02□□□□□ -1.13
CACNA1D-227ENST00000637844 CABLES1Q8TDN4 633 aa8.02□□□□□ -1.13
CACNA1D-227ENST00000637844 API5Q9BZZ5 524 aaKnown RBP8.02□□□□□ -1.13
CACNA1D-227ENST00000637844 DDX19BQ9UMR2 479 aa8.02□□□□□ -1.13
CACNA1D-227ENST00000637844 SPG7Q9UQ90 795 aa8.02□□□□□ -1.13
CACNA1D-227ENST00000637844 LTBP4Q8N2S1 1624 aa8.02□□□□□ -1.13
CACNA1D-227ENST00000637844 ELL2O00472 640 aaPredicted RBP8.01□□□□□ -1.13
CACNA1D-227ENST00000637844 ITPRIPQ8IWB1 547 aa8.01□□□□□ -1.13
CACNA1D-227ENST00000637844 MRPL50Q8N5N7 158 aaKnown RBP8.01□□□□□ -1.13
CACNA1D-227ENST00000637844 C8orf58Q8NAV2 365 aa8.01□□□□□ -1.13
CACNA1D-227ENST00000637844 STK31Q9BXU1 1019 aa8.01□□□□□ -1.13
CACNA1D-227ENST00000637844 AXIN2Q9Y2T1 843 aa8.01□□□□□ -1.13
CACNA1D-227ENST00000637844 KDM3BQ7LBC6 1761 aa8.01□□□□□ -1.13
CACNA1D-227ENST00000637844 PHLPP1O60346 1717 aa8□□□□□ -1.13
CACNA1D-227ENST00000637844 COL22A1Q8NFW1 1626 aaPredicted RBP8□□□□□ -1.13
CACNA1D-227ENST00000637844 HSP90AB1P08238 724 aaKnown RBP8□□□□□ -1.13
CACNA1D-227ENST00000637844 TRIM27P14373 513 aa8□□□□□ -1.13
CACNA1D-227ENST00000637844 EVA1CP58658 441 aa8□□□□□ -1.13
CACNA1D-227ENST00000637844 CHRNA2Q15822 529 aa8□□□□□ -1.13
CACNA1D-227ENST00000637844 RWDD1Q9H446 243 aaPredicted RBP8□□□□□ -1.13
CACNA1D-227ENST00000637844 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8□□□□□ -1.13
CACNA1D-227ENST00000637844 PKD1L3Q7Z443 1732 aa8□□□□□ -1.13
CACNA1D-227ENST00000637844 PTPRCP08575 1304 aa8□□□□□ -1.13
CACNA1D-227ENST00000637844 COL14A1Q05707 1796 aaKnown RBP7.99□□□□□ -1.13
CACNA1D-227ENST00000637844 CEMIPQ8WUJ3 1361 aa7.99□□□□□ -1.13
CACNA1D-227ENST00000637844 TCERG1O14776 1098 aaKnown RBP7.99□□□□□ -1.13
CACNA1D-227ENST00000637844 TOM1O60784 492 aa7.99□□□□□ -1.13
CACNA1D-227ENST00000637844 CCDC30Q5VVM6 783 aa7.99□□□□□ -1.13
CACNA1D-227ENST00000637844 TOM1L2Q6ZVM7 507 aa7.99□□□□□ -1.13
CACNA1D-227ENST00000637844 TSPYL6Q8N831 410 aa7.99□□□□□ -1.13
CACNA1D-227ENST00000637844 IL17REQ8NFR9 667 aa7.99□□□□□ -1.13
CACNA1D-227ENST00000637844 SCN11AQ9UI33 1791 aa7.99□□□□□ -1.13
CACNA1D-227ENST00000637844 WDR17Q8IZU2 1322 aa7.99□□□□□ -1.13
CACNA1D-227ENST00000637844 ADAMTS7Q9UKP4 1686 aa7.98□□□□□ -1.13
CACNA1D-227ENST00000637844 SIPA1L3O60292 1781 aaPredicted RBP7.98□□□□□ -1.13
CACNA1D-227ENST00000637844 BTBD11A6QL63 1104 aa7.98□□□□□ -1.13
CACNA1D-227ENST00000637844 RNMTO43148 476 aaKnown RBP7.98□□□□□ -1.13
CACNA1D-227ENST00000637844 MPRIPQ6WCQ1 1025 aa7.98□□□□□ -1.13
CACNA1D-227ENST00000637844 IFNL2Q8IZJ0 200 aa7.98□□□□□ -1.13
CACNA1D-227ENST00000637844 TSHZ2Q9NRE2 1034 aa7.98□□□□□ -1.13
CACNA1D-227ENST00000637844 MIS18AQ9NYP9 233 aa7.98□□□□□ -1.13
CACNA1D-227ENST00000637844 COL5A2P05997 1499 aaPredicted RBP7.98□□□□□ -1.13
CACNA1D-227ENST00000637844 KDM2BQ8NHM5 1336 aa7.98□□□□□ -1.13
CACNA1D-227ENST00000637844 CACNA1FO60840 1977 aa7.97□□□□□ -1.13
CACNA1D-227ENST00000637844 HOXB7P09629 217 aa7.97□□□□□ -1.13
CACNA1D-227ENST00000637844 RLBP1P12271 317 aa7.97□□□□□ -1.13
CACNA1D-227ENST00000637844 TMEM57Q8N5G2 664 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms