RNA–Protein interactions for RNA: ENST00000637832.1

CACNA1A-252, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 701 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-252ENST00000637832 OVOS2A0A0G2JMS6 1433 aa16.12■□□□□ 0.17
CACNA1A-252ENST00000637832 PKD1L3Q7Z443 1732 aa16.12■□□□□ 0.17
CACNA1A-252ENST00000637832 RXRBP28702 533 aa16.12■□□□□ 0.17
CACNA1A-252ENST00000637832 FAM98CQ17RN3 349 aaKnown RBP16.12■□□□□ 0.17
CACNA1A-252ENST00000637832 RSPH6AQ9H0K4 717 aa16.12■□□□□ 0.17
CACNA1A-252ENST00000637832 THSD7AQ9UPZ6 1657 aa16.11■□□□□ 0.17
CACNA1A-252ENST00000637832 DISP2A7MBM2 1401 aa16.11■□□□□ 0.17
CACNA1A-252ENST00000637832 AMOTQ4VCS5 1084 aa16.11■□□□□ 0.17
CACNA1A-252ENST00000637832 SPG7Q9UQ90 795 aa16.11■□□□□ 0.17
CACNA1A-252ENST00000637832 LRRC37A3O60309 1634 aa16.11■□□□□ 0.17
CACNA1A-252ENST00000637832 PLEKHO1Q53GL0 409 aaPredicted RBP16.1■□□□□ 0.17
CACNA1A-252ENST00000637832 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.1■□□□□ 0.17
CACNA1A-252ENST00000637832 TNS2Q63HR2 1409 aa16.1■□□□□ 0.17
CACNA1A-252ENST00000637832 DDB1Q16531 1140 aa16.09■□□□□ 0.17
CACNA1A-252ENST00000637832 RUNDC1Q96C34 613 aa16.09■□□□□ 0.17
CACNA1A-252ENST00000637832 RGS17Q9UGC6 210 aaPredicted RBP16.09■□□□□ 0.17
CACNA1A-252ENST00000637832 EXOC5O00471 708 aa16.08■□□□□ 0.16
CACNA1A-252ENST00000637832 GAS2L2Q8NHY3 880 aa16.08■□□□□ 0.16
CACNA1A-252ENST00000637832 ZCRB1Q8TBF4 217 aaKnown RBP16.08■□□□□ 0.16
CACNA1A-252ENST00000637832 PCDH11XQ9BZA7 1347 aa16.08■□□□□ 0.16
CACNA1A-252ENST00000637832 PCDH11YQ9BZA8 1340 aa16.08■□□□□ 0.16
CACNA1A-252ENST00000637832 C1orf141Q5JVX7 400 aa16.07■□□□□ 0.16
CACNA1A-252ENST00000637832 CCDC146Q8IYE0 955 aa16.07■□□□□ 0.16
CACNA1A-252ENST00000637832 ONECUT3O60422 494 aaPredicted RBP16.06■□□□□ 0.16
CACNA1A-252ENST00000637832 PDE3BQ13370 1112 aa16.06■□□□□ 0.16
CACNA1A-252ENST00000637832 POTEAQ6S8J7 498 aa16.06■□□□□ 0.16
CACNA1A-252ENST00000637832 SHANK3Q9BYB0 1731 aa16.05■□□□□ 0.16
CACNA1A-252ENST00000637832 ZNF530Q6P9A1 599 aaPredicted RBP16.05■□□□□ 0.16
CACNA1A-252ENST00000637832 SEPT12Q8IYM1 358 aa16.05■□□□□ 0.16
CACNA1A-252ENST00000637832 PLEKHF1Q96S99 279 aa16.05■□□□□ 0.16
CACNA1A-252ENST00000637832 HSP90AB1P08238 724 aaKnown RBP16.03■□□□□ 0.16
CACNA1A-252ENST00000637832 LMOD3Q0VAK6 560 aa16.03■□□□□ 0.16
CACNA1A-252ENST00000637832 IFNL2Q8IZJ0 200 aa16.03■□□□□ 0.16
CACNA1A-252ENST00000637832 PHACTR3Q96KR7 559 aa16.03■□□□□ 0.16
CACNA1A-252ENST00000637832 RGS12O14924 1447 aa16.02■□□□□ 0.16
CACNA1A-252ENST00000637832 MAP3K5Q99683 1374 aa16.02■□□□□ 0.16
CACNA1A-252ENST00000637832 DLG5Q8TDM6 1919 aa16.02■□□□□ 0.16
CACNA1A-252ENST00000637832 NFE2L2Q16236 605 aa16.02■□□□□ 0.16
CACNA1A-252ENST00000637832 MTHFSDQ2M296 383 aaKnown RBP16.02■□□□□ 0.16
CACNA1A-252ENST00000637832 AKAP4Q5JQC9 854 aa16.02■□□□□ 0.16
CACNA1A-252ENST00000637832 DDX54Q8TDD1 881 aaKnown RBP16.02■□□□□ 0.16
CACNA1A-252ENST00000637832 RTF1Q92541 710 aaKnown RBP16.02■□□□□ 0.16
CACNA1A-252ENST00000637832 BRWD3Q6RI45 1802 aa16.02■□□□□ 0.16
CACNA1A-252ENST00000637832 NGEFQ8N5V2 710 aa16.01■□□□□ 0.15
CACNA1A-252ENST00000637832 GNAT3A8MTJ3 354 aa16■□□□□ 0.15
CACNA1A-252ENST00000637832 APAF1O14727 1248 aa16■□□□□ 0.15
CACNA1A-252ENST00000637832 PHKG2P15735 406 aa16■□□□□ 0.15
CACNA1A-252ENST00000637832 TMPOP42166 694 aaKnown RBP16■□□□□ 0.15
CACNA1A-252ENST00000637832 KRT27Q7Z3Y8 459 aa16■□□□□ 0.15
CACNA1A-252ENST00000637832 VIRMAQ69YN4 1812 aaKnown RBP15.99■□□□□ 0.15
CACNA1A-252ENST00000637832 RIPK4P57078 832 aa15.99■□□□□ 0.15
CACNA1A-252ENST00000637832 CYP27B1O15528 508 aa15.98■□□□□ 0.15
CACNA1A-252ENST00000637832 HTATSF1O43719 755 aaKnown RBP15.98■□□□□ 0.15
CACNA1A-252ENST00000637832 NEUROD2Q15784 382 aa15.98■□□□□ 0.15
CACNA1A-252ENST00000637832 DCAF5Q96JK2 942 aa15.98■□□□□ 0.15
CACNA1A-252ENST00000637832 SCN11AQ9UI33 1791 aa15.98■□□□□ 0.15
CACNA1A-252ENST00000637832 NCBP3Q53F19 620 aaKnown RBP15.97■□□□□ 0.15
CACNA1A-252ENST00000637832 RRP7AQ9Y3A4 280 aaKnown RBP15.97■□□□□ 0.15
CACNA1A-252ENST00000637832 DOT1LQ8TEK3 1739 aa15.97■□□□□ 0.15
CACNA1A-252ENST00000637832 MARCH10Q8NA82 808 aaPredicted RBP15.96■□□□□ 0.15
CACNA1A-252ENST00000637832 HNRNPUQ00839 825 aaKnown RBP eCLIP15.95■□□□□ 0.14
CACNA1A-252ENST00000637832 CALD1Q05682 793 aaKnown RBP15.95■□□□□ 0.14
CACNA1A-252ENST00000637832 NKX1-1Q15270 411 aaPredicted RBP15.95■□□□□ 0.14
CACNA1A-252ENST00000637832 ADAMTS7Q9UKP4 1686 aa15.95■□□□□ 0.14
CACNA1A-252ENST00000637832 BCL9O00512 1426 aa15.94■□□□□ 0.14
CACNA1A-252ENST00000637832 TEFQ10587 303 aa15.94■□□□□ 0.14
CACNA1A-252ENST00000637832 CCDC27Q2M243 656 aa15.94■□□□□ 0.14
CACNA1A-252ENST00000637832 MPRIPQ6WCQ1 1025 aa15.94■□□□□ 0.14
CACNA1A-252ENST00000637832 FAM196AQ6ZSG2 479 aa15.94■□□□□ 0.14
CACNA1A-252ENST00000637832 KDM6AO15550 1401 aaPredicted RBP15.94■□□□□ 0.14
CACNA1A-252ENST00000637832 TOGARAM1Q9Y4F4 1720 aa15.93■□□□□ 0.14
CACNA1A-252ENST00000637832 NHSQ6T4R5 1651 aa15.92■□□□□ 0.14
CACNA1A-252ENST00000637832 ERVV-2B6SEH9 535 aa15.92■□□□□ 0.14
CACNA1A-252ENST00000637832 RNMTO43148 476 aaKnown RBP15.92■□□□□ 0.14
CACNA1A-252ENST00000637832 SALL2Q9Y467 1007 aaPredicted RBP15.92■□□□□ 0.14
CACNA1A-252ENST00000637832 MRC1P22897 1456 aa15.91■□□□□ 0.14
CACNA1A-252ENST00000637832 CEMIPQ8WUJ3 1361 aa15.91■□□□□ 0.14
CACNA1A-252ENST00000637832 CABP4P57796 275 aa15.91■□□□□ 0.14
CACNA1A-252ENST00000637832 MCM10Q7L590 875 aa15.91■□□□□ 0.14
CACNA1A-252ENST00000637832 SYTL4Q96C24 671 aaPredicted RBP15.91■□□□□ 0.14
CACNA1A-252ENST00000637832 KAT6BQ8WYB5 2073 aa15.91■□□□□ 0.14
CACNA1A-252ENST00000637832 ITGB4P16144 1822 aa15.91■□□□□ 0.14
CACNA1A-252ENST00000637832 SBF2Q86WG5 1849 aa15.91■□□□□ 0.14
CACNA1A-252ENST00000637832 SENP3-EIF4A1A0A087X0R7 540 aa15.9■□□□□ 0.14
CACNA1A-252ENST00000637832 TMOD3Q9NYL9 352 aa15.9■□□□□ 0.14
CACNA1A-252ENST00000637832 TRIM35Q9UPQ4 493 aa15.9■□□□□ 0.14
CACNA1A-252ENST00000637832 DCTN1Q14203 1278 aa15.89■□□□□ 0.13
CACNA1A-252ENST00000637832 FAM182BQ5T319 152 aa15.89■□□□□ 0.13
CACNA1A-252ENST00000637832 WWC1Q8IX03 1113 aa15.89■□□□□ 0.13
CACNA1A-252ENST00000637832 IL17REQ8NFR9 667 aa15.89■□□□□ 0.13
CACNA1A-252ENST00000637832 SIPA1L3O60292 1781 aaPredicted RBP15.89■□□□□ 0.13
CACNA1A-252ENST00000637832 ACSBG1Q96GR2 724 aa15.88■□□□□ 0.13
CACNA1A-252ENST00000637832 SLC52A2Q9HAB3 445 aa15.88■□□□□ 0.13
CACNA1A-252ENST00000637832 LGR6Q9HBX8 967 aa15.88■□□□□ 0.13
CACNA1A-252ENST00000637832 PRIM1P49642 420 aaKnown RBP15.87■□□□□ 0.13
CACNA1A-252ENST00000637832 WDR63Q8IWG1 891 aa15.87■□□□□ 0.13
CACNA1A-252ENST00000637832 YTHDC1Q96MU7 727 aaKnown RBP15.87■□□□□ 0.13
CACNA1A-252ENST00000637832 ZBED9Q6R2W3 1325 aa15.87■□□□□ 0.13
CACNA1A-252ENST00000637832 TAF7Q15545 349 aaPredicted RBP15.86■□□□□ 0.13
CACNA1A-252ENST00000637832 NFATC2IPQ8NCF5 419 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms