RNA–Protein interactions for RNA: ENST00000637736.1

CACNA1A-246, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 8,340 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-246ENST00000637736 FAM69CQ0P6D2 419 aa22.28■■□□□ 1.16
CACNA1A-246ENST00000637736 UBAC1Q9BSL1 405 aa22.27■■□□□ 1.16
CACNA1A-246ENST00000637736 CABP2Q9NPB3 220 aa22.27■■□□□ 1.16
CACNA1A-246ENST00000637736 FKBP4Q02790 459 aaKnown RBP eCLIP22.27■■□□□ 1.16
CACNA1A-246ENST00000637736 TICAM2Q86XR7 235 aa22.27■■□□□ 1.16
CACNA1A-246ENST00000637736 CTNNA3Q9UI47 895 aa22.27■■□□□ 1.16
CACNA1A-246ENST00000637736 ERICH4A6NGS2 130 aa22.27■■□□□ 1.16
CACNA1A-246ENST00000637736 WDHD1O75717 1129 aaPredicted RBP22.27■■□□□ 1.16
CACNA1A-246ENST00000637736 CTNNBL1Q8WYA6 563 aaPredicted RBP22.27■■□□□ 1.15
CACNA1A-246ENST00000637736 SPG7Q9UQ90 795 aa22.27■■□□□ 1.15
CACNA1A-246ENST00000637736 TDO2P48775 406 aa22.26■■□□□ 1.15
CACNA1A-246ENST00000637736 HOOK3Q86VS8 718 aa22.26■■□□□ 1.15
CACNA1A-246ENST00000637736 SIL1Q9H173 461 aa22.26■■□□□ 1.15
CACNA1A-246ENST00000637736 PABPN1LA6NDY0 278 aaKnown RBP22.26■■□□□ 1.15
CACNA1A-246ENST00000637736 PAXIP1Q6ZW49 1069 aaPredicted RBP22.25■■□□□ 1.15
CACNA1A-246ENST00000637736 SMC1AQ14683 1233 aaKnown RBP22.25■■□□□ 1.15
CACNA1A-246ENST00000637736 SPATA24Q86W54 205 aa22.25■■□□□ 1.15
CACNA1A-246ENST00000637736 GGNBP2Q9H3C7 697 aa22.24■■□□□ 1.15
CACNA1A-246ENST00000637736 SEC63Q9UGP8 760 aaKnown RBP22.24■■□□□ 1.15
CACNA1A-246ENST00000637736 ANKRD18BA2A2Z9 1011 aa22.24■■□□□ 1.15
CACNA1A-246ENST00000637736 SMTNL1A8MU46 457 aa22.24■■□□□ 1.15
CACNA1A-246ENST00000637736 HDGFL1Q5TGJ6 251 aa22.24■■□□□ 1.15
CACNA1A-246ENST00000637736 TMCO3Q6UWJ1 677 aa22.24■■□□□ 1.15
CACNA1A-246ENST00000637736 CRACR2AQ9BSW2 395 aa22.24■■□□□ 1.15
CACNA1A-246ENST00000637736 MAP4K4O95819 1239 aaPredicted RBP22.23■■□□□ 1.15
CACNA1A-246ENST00000637736 MTHFSP49914 203 aa22.23■■□□□ 1.15
CACNA1A-246ENST00000637736 KRT32Q14532 448 aa22.23■■□□□ 1.15
CACNA1A-246ENST00000637736 TWISTNBQ3B726 338 aaPredicted RBP22.22■■□□□ 1.15
CACNA1A-246ENST00000637736 IFFO1Q0D2I5 559 aa22.22■■□□□ 1.15
CACNA1A-246ENST00000637736 CCDC178Q5BJE1 867 aa22.22■■□□□ 1.15
CACNA1A-246ENST00000637736 TTC16Q8NEE8 873 aa22.22■■□□□ 1.15
CACNA1A-246ENST00000637736 MPNDQ8N594 471 aa22.22■■□□□ 1.15
CACNA1A-246ENST00000637736 LARP1Q6PKG0 1096 aaKnown RBP22.21■■□□□ 1.15
CACNA1A-246ENST00000637736 FERMT2Q96AC1 680 aa22.21■■□□□ 1.15
CACNA1A-246ENST00000637736 NUTM2BA6NNL0 878 aaPredicted RBP22.21■■□□□ 1.15
CACNA1A-246ENST00000637736 NUTM2EB1AL46 878 aaPredicted RBP22.21■■□□□ 1.15
CACNA1A-246ENST00000637736 CTNNA2P26232 953 aa22.21■■□□□ 1.15
CACNA1A-246ENST00000637736 NUTM2AQ8IVF1 878 aaPredicted RBP22.21■■□□□ 1.15
CACNA1A-246ENST00000637736 TMOD2Q9NZR1 351 aa22.21■■□□□ 1.15
CACNA1A-246ENST00000637736 LARP1BQ659C4 914 aaKnown RBP22.21■■□□□ 1.15
CACNA1A-246ENST00000637736 TOM1L2Q6ZVM7 507 aa22.21■■□□□ 1.15
CACNA1A-246ENST00000637736 MACROD2A1Z1Q3 448 aa22.21■■□□□ 1.15
CACNA1A-246ENST00000637736 SHTN1A0MZ66 631 aa22.21■■□□□ 1.15
CACNA1A-246ENST00000637736 GIGYF2Q6Y7W6 1299 aaKnown RBP22.21■■□□□ 1.15
CACNA1A-246ENST00000637736 GCOM1H8Y6P7 765 aaPredicted RBP22.2■■□□□ 1.14
CACNA1A-246ENST00000637736 MYZAPP0CAP1 466 aa22.2■■□□□ 1.14
CACNA1A-246ENST00000637736 IMMTQ16891 758 aaKnown RBP22.2■■□□□ 1.14
CACNA1A-246ENST00000637736 SPA17Q15506 151 aa22.2■■□□□ 1.14
CACNA1A-246ENST00000637736 ZWINTO95229 277 aa22.2■■□□□ 1.14
CACNA1A-246ENST00000637736 FERP16591 822 aa22.2■■□□□ 1.14
CACNA1A-246ENST00000637736 ARHGAP29Q52LW3 1261 aa22.2■■□□□ 1.14
CACNA1A-246ENST00000637736 CFAP57Q96MR6 1250 aa22.2■■□□□ 1.14
CACNA1A-246ENST00000637736 MAPK8IP2Q13387 824 aaPredicted RBP22.2■■□□□ 1.14
CACNA1A-246ENST00000637736 SSX2IPQ9Y2D8 614 aa22.2■■□□□ 1.14
CACNA1A-246ENST00000637736 MYL6BP14649 208 aa22.2■■□□□ 1.14
CACNA1A-246ENST00000637736 MRPS9P82933 396 aaKnown RBP22.2■■□□□ 1.14
CACNA1A-246ENST00000637736 SPINK5Q9NQ38 1064 aaPredicted RBP22.19■■□□□ 1.14
CACNA1A-246ENST00000637736 MCM3P25205 808 aa22.19■■□□□ 1.14
CACNA1A-246ENST00000637736 PLCD3Q8N3E9 789 aa22.18■■□□□ 1.14
CACNA1A-246ENST00000637736 SPATA32Q96LK8 384 aa22.18■■□□□ 1.14
CACNA1A-246ENST00000637736 TTLL12Q14166 644 aaPredicted RBP22.18■■□□□ 1.14
CACNA1A-246ENST00000637736 WDR78Q5VTH9 848 aa22.18■■□□□ 1.14
CACNA1A-246ENST00000637736 BLOC1S2Q6QNY1 142 aa22.18■■□□□ 1.14
CACNA1A-246ENST00000637736 VPS36Q86VN1 386 aa22.18■■□□□ 1.14
CACNA1A-246ENST00000637736 DDX54Q8TDD1 881 aaKnown RBP22.18■■□□□ 1.14
CACNA1A-246ENST00000637736 CA8P35219 290 aa22.18■■□□□ 1.14
CACNA1A-246ENST00000637736 HECW1Q76N89 1606 aa22.18■■□□□ 1.14
CACNA1A-246ENST00000637736 NOB1Q9ULX3 412 aaKnown RBP22.18■■□□□ 1.14
CACNA1A-246ENST00000637736 MAP9Q49MG5 647 aa22.17■■□□□ 1.14
CACNA1A-246ENST00000637736 UBA5Q9GZZ9 404 aa22.17■■□□□ 1.14
CACNA1A-246ENST00000637736 LRP2BPQ9P2M1 347 aa22.17■■□□□ 1.14
CACNA1A-246ENST00000637736 SERPINA10Q9UK55 444 aa22.17■■□□□ 1.14
CACNA1A-246ENST00000637736 FGFR1OPO95684 399 aaKnown RBP22.17■■□□□ 1.14
CACNA1A-246ENST00000637736 SLC4A2P04920 1241 aa22.17■■□□□ 1.14
CACNA1A-246ENST00000637736 IGHMBP2P38935 993 aaKnown RBP22.17■■□□□ 1.14
CACNA1A-246ENST00000637736 ZNF652Q9Y2D9 606 aa22.17■■□□□ 1.14
CACNA1A-246ENST00000637736 PRKAR2BP31323 418 aa22.17■■□□□ 1.14
CACNA1A-246ENST00000637736 CACNA2D4Q7Z3S7 1137 aa22.17■■□□□ 1.14
CACNA1A-246ENST00000637736 FGD6Q6ZV73 1430 aa22.16■■□□□ 1.14
CACNA1A-246ENST00000637736 C1orf115Q9H7X2 142 aa22.16■■□□□ 1.14
CACNA1A-246ENST00000637736 TSG101Q99816 390 aa22.16■■□□□ 1.14
CACNA1A-246ENST00000637736 ZNF692Q9BU19 519 aaPredicted RBP22.16■■□□□ 1.14
CACNA1A-246ENST00000637736 UPF3BQ9BZI7 483 aaKnown RBP22.16■■□□□ 1.14
CACNA1A-246ENST00000637736 ANKRD50Q9ULJ7 1429 aa22.15■■□□□ 1.14
CACNA1A-246ENST00000637736 RAI14Q9P0K7 980 aa22.15■■□□□ 1.14
CACNA1A-246ENST00000637736 LUZP1Q86V48 1076 aa22.15■■□□□ 1.14
CACNA1A-246ENST00000637736 PDE3AQ14432 1141 aa22.15■■□□□ 1.14
CACNA1A-246ENST00000637736 UQCRHLA0A096LP55 91 aa22.15■■□□□ 1.14
CACNA1A-246ENST00000637736 UQCRHP07919 91 aa22.15■■□□□ 1.14
CACNA1A-246ENST00000637736 CASQ1P31415 396 aa22.15■■□□□ 1.14
CACNA1A-246ENST00000637736 K7ELQ4 463 aaPredicted RBP22.14■■□□□ 1.14
CACNA1A-246ENST00000637736 AACSQ86V21 672 aa22.14■■□□□ 1.14
CACNA1A-246ENST00000637736 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP22.14■■□□□ 1.14
CACNA1A-246ENST00000637736 CFAP100Q494V2 611 aa22.14■■□□□ 1.13
CACNA1A-246ENST00000637736 PROSER2Q86WR7 435 aaPredicted RBP22.14■■□□□ 1.13
CACNA1A-246ENST00000637736 TNNT1P13805 278 aa22.14■■□□□ 1.13
CACNA1A-246ENST00000637736 ZSCAN31Q96LW9 406 aaPredicted RBP22.14■■□□□ 1.13
CACNA1A-246ENST00000637736 TMCO5BA8MYB1 307 aa22.13■■□□□ 1.13
CACNA1A-246ENST00000637736 BMS1Q14692 1282 aaKnown RBP22.13■■□□□ 1.13
CACNA1A-246ENST00000637736 SYNJ2O15056 1496 aa22.13■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms